RNA–Protein interactions for RNA: ENST00000555124.1

LRP1-208, Transcript of LDL receptor related protein 1, humanhuman

TSL 4

Gene LRP1, Length 550 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-208ENST00000555124 SHANK3Q9BYB0 1731 aa19.93■□□□□ 0.78
LRP1-208ENST00000555124 DDX54Q8TDD1 881 aaKnown RBP19.93■□□□□ 0.78
LRP1-208ENST00000555124 SF3B2Q13435 895 aaKnown RBP19.92■□□□□ 0.78
LRP1-208ENST00000555124 EP400Q96L91 3159 aa19.92■□□□□ 0.78
LRP1-208ENST00000555124 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
LRP1-208ENST00000555124 TRIM37O94972 964 aa19.91■□□□□ 0.78
LRP1-208ENST00000555124 SULT6B1Q6IMI4 303 aa19.91■□□□□ 0.78
LRP1-208ENST00000555124 PKD1L3Q7Z443 1732 aa19.9■□□□□ 0.78
LRP1-208ENST00000555124 AEBP1Q8IUX7 1158 aa19.9■□□□□ 0.78
LRP1-208ENST00000555124 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
LRP1-208ENST00000555124 BCL9O00512 1426 aa19.89■□□□□ 0.77
LRP1-208ENST00000555124 U2SURPO15042 1029 aaKnown RBP19.89■□□□□ 0.77
LRP1-208ENST00000555124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.88■□□□□ 0.77
LRP1-208ENST00000555124 NUDCQ9Y266 331 aa19.88■□□□□ 0.77
LRP1-208ENST00000555124 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
LRP1-208ENST00000555124 KDRP35968 1356 aa19.87■□□□□ 0.77
LRP1-208ENST00000555124 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
LRP1-208ENST00000555124 PCDH11XQ9BZA7 1347 aa19.87■□□□□ 0.77
LRP1-208ENST00000555124 PCDH11YQ9BZA8 1340 aa19.87■□□□□ 0.77
LRP1-208ENST00000555124 HMOX1P09601 288 aa19.87■□□□□ 0.77
LRP1-208ENST00000555124 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
LRP1-208ENST00000555124 PLEKHO1Q53GL0 409 aaPredicted RBP19.86■□□□□ 0.77
LRP1-208ENST00000555124 BAG6P46379 1132 aa19.85■□□□□ 0.77
LRP1-208ENST00000555124 PLEKHG2Q9H7P9 1386 aa19.84■□□□□ 0.77
LRP1-208ENST00000555124 CYP27B1O15528 508 aa19.84■□□□□ 0.77
LRP1-208ENST00000555124 DEFB132Q7Z7B7 95 aa19.84■□□□□ 0.77
LRP1-208ENST00000555124 ACSBG1Q96GR2 724 aa19.84■□□□□ 0.77
LRP1-208ENST00000555124 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
LRP1-208ENST00000555124 APBA3O96018 575 aa19.83■□□□□ 0.77
LRP1-208ENST00000555124 AMOTQ4VCS5 1084 aa19.83■□□□□ 0.77
LRP1-208ENST00000555124 DOT1LQ8TEK3 1739 aa19.82■□□□□ 0.76
LRP1-208ENST00000555124 NHSQ6T4R5 1651 aa19.82■□□□□ 0.76
LRP1-208ENST00000555124 U2AF1L5P0DN76 240 aaPredicted RBP19.82■□□□□ 0.76
LRP1-208ENST00000555124 U2AF1Q01081 240 aaKnown RBP eCLIP19.82■□□□□ 0.76
LRP1-208ENST00000555124 IFNL2Q8IZJ0 200 aa19.82■□□□□ 0.76
LRP1-208ENST00000555124 KCNQ2O43526 872 aa19.81■□□□□ 0.76
LRP1-208ENST00000555124 PTF1AQ7RTS3 328 aa19.81■□□□□ 0.76
LRP1-208ENST00000555124 EN1Q05925 392 aaPredicted RBP19.8■□□□□ 0.76
LRP1-208ENST00000555124 ZNF530Q6P9A1 599 aaPredicted RBP19.8■□□□□ 0.76
LRP1-208ENST00000555124 BTAF1O14981 1849 aa19.79■□□□□ 0.76
LRP1-208ENST00000555124 ITGB4P16144 1822 aa19.79■□□□□ 0.76
LRP1-208ENST00000555124 PHKG2P15735 406 aa19.79■□□□□ 0.76
LRP1-208ENST00000555124 PRIM1P49642 420 aaKnown RBP19.79■□□□□ 0.76
LRP1-208ENST00000555124 NKX1-1Q15270 411 aaPredicted RBP19.79■□□□□ 0.76
LRP1-208ENST00000555124 ANP32CO43423 234 aa19.78■□□□□ 0.76
LRP1-208ENST00000555124 C1orf141Q5JVX7 400 aa19.78■□□□□ 0.76
LRP1-208ENST00000555124 SYTL4Q96C24 671 aaPredicted RBP19.78■□□□□ 0.76
LRP1-208ENST00000555124 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
LRP1-208ENST00000555124 VIRMAQ69YN4 1812 aaKnown RBP19.76■□□□□ 0.75
LRP1-208ENST00000555124 FCHSD2O94868 740 aa19.76■□□□□ 0.75
LRP1-208ENST00000555124 HSP90AB1P08238 724 aaKnown RBP19.76■□□□□ 0.75
LRP1-208ENST00000555124 PRKAR2BP31323 418 aa19.76■□□□□ 0.75
LRP1-208ENST00000555124 EZH2Q15910 746 aaKnown RBP19.75■□□□□ 0.75
LRP1-208ENST00000555124 CAMKK2Q96RR4 588 aa19.75■□□□□ 0.75
LRP1-208ENST00000555124 TOGARAM1Q9Y4F4 1720 aa19.75■□□□□ 0.75
LRP1-208ENST00000555124 PLSCR1O15162 318 aa19.74■□□□□ 0.75
LRP1-208ENST00000555124 MTHFSDQ2M296 383 aaKnown RBP19.74■□□□□ 0.75
LRP1-208ENST00000555124 RGPD3A6NKT7 1758 aaPredicted RBP19.73■□□□□ 0.75
LRP1-208ENST00000555124 RGPD4Q7Z3J3 1758 aa19.73■□□□□ 0.75
LRP1-208ENST00000555124 AKAP4Q5JQC9 854 aa19.73■□□□□ 0.75
LRP1-208ENST00000555124 SCN11AQ9UI33 1791 aa19.72■□□□□ 0.75
LRP1-208ENST00000555124 MPRIPQ6WCQ1 1025 aa19.72■□□□□ 0.75
LRP1-208ENST00000555124 GAS2L2Q8NHY3 880 aa19.72■□□□□ 0.75
LRP1-208ENST00000555124 DCAF5Q96JK2 942 aa19.72■□□□□ 0.75
LRP1-208ENST00000555124 PHACTR3Q96KR7 559 aa19.71■□□□□ 0.75
LRP1-208ENST00000555124 NEFMP07197 916 aa19.7■□□□□ 0.74
LRP1-208ENST00000555124 PNNQ9H307 717 aaKnown RBP19.7■□□□□ 0.74
LRP1-208ENST00000555124 RREB1Q92766 1687 aa19.69■□□□□ 0.74
LRP1-208ENST00000555124 ERVV-2B6SEH9 535 aa19.69■□□□□ 0.74
LRP1-208ENST00000555124 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.74
LRP1-208ENST00000555124 TMOD3Q9NYL9 352 aa19.69■□□□□ 0.74
LRP1-208ENST00000555124 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
LRP1-208ENST00000555124 PIGBQ92521 554 aa19.68■□□□□ 0.74
LRP1-208ENST00000555124 TXNRD1Q16881 649 aa19.67■□□□□ 0.74
LRP1-208ENST00000555124 DLG5Q8TDM6 1919 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 NUP188Q5SRE5 1749 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 GNAT3A8MTJ3 354 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 RNMTO43148 476 aaKnown RBP19.66■□□□□ 0.74
LRP1-208ENST00000555124 CABP4P57796 275 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 PROM2Q8N271 834 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 PLEKHF1Q96S99 279 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 LGR6Q9HBX8 967 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 MAP3K5Q99683 1374 aa19.66■□□□□ 0.74
LRP1-208ENST00000555124 LY75O60449 1722 aa19.65■□□□□ 0.74
LRP1-208ENST00000555124 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
LRP1-208ENST00000555124 SMARCC1Q92922 1105 aaPredicted RBP19.64■□□□□ 0.73
LRP1-208ENST00000555124 MAPK8IP3Q9UPT6 1336 aa19.64■□□□□ 0.73
LRP1-208ENST00000555124 ADAMTS7Q9UKP4 1686 aa19.63■□□□□ 0.73
LRP1-208ENST00000555124 NFATC2IPQ8NCF5 419 aa19.63■□□□□ 0.73
LRP1-208ENST00000555124 ADAMTS8Q9UP79 889 aa19.63■□□□□ 0.73
LRP1-208ENST00000555124 NBPF14Q5TI25 921 aa19.62■□□□□ 0.73
LRP1-208ENST00000555124 MRS2Q9HD23 443 aa19.62■□□□□ 0.73
LRP1-208ENST00000555124 PALLDQ8WX93 1383 aa19.61■□□□□ 0.73
LRP1-208ENST00000555124 SLC27A3Q5K4L6 730 aa19.61■□□□□ 0.73
LRP1-208ENST00000555124 IL17REQ8NFR9 667 aa19.61■□□□□ 0.73
LRP1-208ENST00000555124 SLC52A2Q9HAB3 445 aa19.61■□□□□ 0.73
LRP1-208ENST00000555124 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
LRP1-208ENST00000555124 CCDC146Q8IYE0 955 aa19.6■□□□□ 0.73
LRP1-208ENST00000555124 RTF1Q92541 710 aaKnown RBP19.6■□□□□ 0.73
LRP1-208ENST00000555124 ATG3Q9NT62 314 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms