RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 SPATA31A3Q5VYP0 1347 aa8.04□□□□□ -1.12
TMEM260-205ENST00000554981 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
TMEM260-205ENST00000554981 TECPR2O15040 1411 aa8.04□□□□□ -1.12
TMEM260-205ENST00000554981 NRAPQ86VF7 1730 aa8.04□□□□□ -1.12
TMEM260-205ENST00000554981 FAM83GA6ND36 823 aa8.04□□□□□ -1.12
TMEM260-205ENST00000554981 GIGYF1O75420 1035 aaPredicted RBP8.04□□□□□ -1.12
TMEM260-205ENST00000554981 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
TMEM260-205ENST00000554981 MYOM1P52179 1685 aa8.04□□□□□ -1.12
TMEM260-205ENST00000554981 RGPD8O14715 1765 aaPredicted RBP8.04□□□□□ -1.12
TMEM260-205ENST00000554981 GOLGB1Q14789 3259 aaKnown RBP8.04□□□□□ -1.12
TMEM260-205ENST00000554981 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
TMEM260-205ENST00000554981 ABCC11Q96J66 1382 aa8.03□□□□□ -1.12
TMEM260-205ENST00000554981 NBPF8Q3BBV2 869 aa8.03□□□□□ -1.12
TMEM260-205ENST00000554981 NBPF14Q5TI25 921 aa8.03□□□□□ -1.12
TMEM260-205ENST00000554981 DCAF11Q8TEB1 546 aa8.03□□□□□ -1.12
TMEM260-205ENST00000554981 PDGFDQ9GZP0 370 aaPredicted RBP8.03□□□□□ -1.12
TMEM260-205ENST00000554981 C14orf93Q9H972 538 aaKnown RBP8.03□□□□□ -1.12
TMEM260-205ENST00000554981 CHD4Q14839 1912 aa8.03□□□□□ -1.12
TMEM260-205ENST00000554981 THSD7AQ9UPZ6 1657 aa8.02□□□□□ -1.13
TMEM260-205ENST00000554981 ADGRB1O14514 1584 aa8.02□□□□□ -1.13
TMEM260-205ENST00000554981 DHX57Q6P158 1386 aaKnown RBP8.02□□□□□ -1.13
TMEM260-205ENST00000554981 GRXCR2A6NFK2 248 aa8.02□□□□□ -1.13
TMEM260-205ENST00000554981 EVI5O60447 810 aa8.02□□□□□ -1.13
TMEM260-205ENST00000554981 SLC34A2O95436 690 aa8.02□□□□□ -1.13
TMEM260-205ENST00000554981 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
TMEM260-205ENST00000554981 KRT28Q7Z3Y7 464 aa8.02□□□□□ -1.13
TMEM260-205ENST00000554981 PTCD2Q8WV60 388 aaKnown RBP8.02□□□□□ -1.13
TMEM260-205ENST00000554981 BTG4Q9NY30 223 aa8.02□□□□□ -1.13
TMEM260-205ENST00000554981 RIMBP2O15034 1052 aa8.01□□□□□ -1.13
TMEM260-205ENST00000554981 ZBTB7AO95365 584 aa8.01□□□□□ -1.13
TMEM260-205ENST00000554981 PRAM1Q96QH2 718 aa8.01□□□□□ -1.13
TMEM260-205ENST00000554981 TRAK1Q9UPV9 953 aa8.01□□□□□ -1.13
TMEM260-205ENST00000554981 PARD3Q8TEW0 1356 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 DLC1Q96QB1 1528 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 KIF1AQ12756 1690 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 DOK7Q18PE1 504 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 HIRIP3Q9BW71 556 aaPredicted RBP8□□□□□ -1.13
TMEM260-205ENST00000554981 POGKQ9P215 609 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 TNS3Q68CZ2 1445 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 ARHGEF28Q8N1W1 1705 aaKnown RBP8□□□□□ -1.13
TMEM260-205ENST00000554981 SPATA31A5Q5VU36 1347 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 SPATA31A7Q8IWB4 1347 aa8□□□□□ -1.13
TMEM260-205ENST00000554981 MINK1Q8N4C8 1332 aaPredicted RBP8□□□□□ -1.13
TMEM260-205ENST00000554981 FAM196AQ6ZSG2 479 aa7.99□□□□□ -1.13
TMEM260-205ENST00000554981 ZNF710Q8N1W2 664 aa7.99□□□□□ -1.13
TMEM260-205ENST00000554981 FHDC1Q9C0D6 1143 aaPredicted RBP7.99□□□□□ -1.13
TMEM260-205ENST00000554981 ANO8Q9HCE9 1232 aaPredicted RBP7.99□□□□□ -1.13
TMEM260-205ENST00000554981 CASZ1Q86V15 1759 aa7.99□□□□□ -1.13
TMEM260-205ENST00000554981 PTGER2P43116 358 aa7.98□□□□□ -1.13
TMEM260-205ENST00000554981 DDX12PQ92771 950 aa7.98□□□□□ -1.13
TMEM260-205ENST00000554981 SYT17Q9BSW7 474 aa7.98□□□□□ -1.13
TMEM260-205ENST00000554981 PCDHGA4Q9Y5G9 962 aa7.98□□□□□ -1.13
TMEM260-205ENST00000554981 SNPHO15079 494 aa7.97□□□□□ -1.13
TMEM260-205ENST00000554981 RBM26Q5T8P6 1007 aaKnown RBP7.97□□□□□ -1.13
TMEM260-205ENST00000554981 PMFBP1Q8TBY8 1022 aa7.97□□□□□ -1.13
TMEM260-205ENST00000554981 SHANK3Q9BYB0 1731 aa7.97□□□□□ -1.13
TMEM260-205ENST00000554981 SIRT1Q96EB6 747 aa7.96□□□□□ -1.14
TMEM260-205ENST00000554981 SIN3AQ96ST3 1273 aa7.96□□□□□ -1.14
TMEM260-205ENST00000554981 COL14A1Q05707 1796 aaKnown RBP7.96□□□□□ -1.14
TMEM260-205ENST00000554981 KIAA1210Q9ULL0 1709 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 TULP4Q9NRJ4 1543 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 POTEMA6NI47 508 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 NEUROD1Q13562 356 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 NBPF1Q3BBV0 1214 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 GPIHBP1Q8IV16 184 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 ZC3H15Q8WU90 426 aaKnown RBP7.95□□□□□ -1.14
TMEM260-205ENST00000554981 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 PRR36Q9H6K5 1346 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 ANKARQ7Z5J8 1434 aa7.95□□□□□ -1.14
TMEM260-205ENST00000554981 PSME1Q06323 249 aa7.94□□□□□ -1.14
TMEM260-205ENST00000554981 GPR162Q16538 588 aa7.94□□□□□ -1.14
TMEM260-205ENST00000554981 POTEGQ6S5H5 508 aa7.94□□□□□ -1.14
TMEM260-205ENST00000554981 SPATA31A1Q5TZJ5 1347 aa7.94□□□□□ -1.14
TMEM260-205ENST00000554981 TRPM3Q9HCF6 1732 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-205ENST00000554981 QRICH2Q9H0J4 1663 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 ITSN1Q15811 1721 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 WASLO00401 505 aaPredicted RBP7.93□□□□□ -1.14
TMEM260-205ENST00000554981 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 ARSIQ5FYB1 569 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 ZSWIM6Q9HCJ5 1215 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 STRN4Q9NRL3 753 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 SBNO1A3KN83 1393 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 ARHGEF10O15013 1369 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 ATP7BP35670 1465 aa7.93□□□□□ -1.14
TMEM260-205ENST00000554981 TRPM1Q7Z4N2 1603 aa7.92□□□□□ -1.14
TMEM260-205ENST00000554981 TOPAZ1Q8N9V7 1692 aa7.92□□□□□ -1.14
TMEM260-205ENST00000554981 HSPA6P17066 643 aa7.92□□□□□ -1.14
TMEM260-205ENST00000554981 CHRNA2Q15822 529 aa7.92□□□□□ -1.14
TMEM260-205ENST00000554981 PTF1AQ7RTS3 328 aa7.92□□□□□ -1.14
TMEM260-205ENST00000554981 L3MBTL2Q969R5 705 aa7.92□□□□□ -1.14
TMEM260-205ENST00000554981 ALS2Q96Q42 1657 aa7.92□□□□□ -1.14
TMEM260-205ENST00000554981 NUDT7P0C024 238 aa7.91□□□□□ -1.14
TMEM260-205ENST00000554981 HOXB3P14651 431 aaPredicted RBP7.91□□□□□ -1.14
TMEM260-205ENST00000554981 OSBPP22059 807 aa7.91□□□□□ -1.14
TMEM260-205ENST00000554981 KRI1Q8N9T8 703 aaKnown RBP7.91□□□□□ -1.14
TMEM260-205ENST00000554981 NGDNQ8NEJ9 315 aaKnown RBP7.91□□□□□ -1.14
TMEM260-205ENST00000554981 STAC3Q96MF2 364 aa7.91□□□□□ -1.14
TMEM260-205ENST00000554981 EIF3AQ14152 1382 aaKnown RBP7.91□□□□□ -1.14
TMEM260-205ENST00000554981 PHF14O94880 888 aa7.9□□□□□ -1.14
TMEM260-205ENST00000554981 COL13A1Q5TAT6 717 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms