RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
PSMC6-207ENST00000554952 ZCRB1Q8TBF4 217 aaKnown RBP16.43■□□□□ 0.22
PSMC6-207ENST00000554952 SPON1Q9HCB6 807 aa16.43■□□□□ 0.22
PSMC6-207ENST00000554952 RTL1A6NKG5 1358 aa16.42■□□□□ 0.22
PSMC6-207ENST00000554952 HSPA5P11021 654 aaKnown RBP16.42■□□□□ 0.22
PSMC6-207ENST00000554952 KCNA4P22459 653 aa16.42■□□□□ 0.22
PSMC6-207ENST00000554952 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
PSMC6-207ENST00000554952 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
PSMC6-207ENST00000554952 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
PSMC6-207ENST00000554952 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
PSMC6-207ENST00000554952 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
PSMC6-207ENST00000554952 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
PSMC6-207ENST00000554952 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
PSMC6-207ENST00000554952 PPP1R1BQ9UD71 204 aaPredicted RBP16.4■□□□□ 0.22
PSMC6-207ENST00000554952 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
PSMC6-207ENST00000554952 RGPD3A6NKT7 1758 aaPredicted RBP16.4■□□□□ 0.22
PSMC6-207ENST00000554952 RGPD4Q7Z3J3 1758 aa16.4■□□□□ 0.22
PSMC6-207ENST00000554952 CGNL1Q0VF96 1302 aa16.4■□□□□ 0.22
PSMC6-207ENST00000554952 RGPD2P0DJD1 1756 aa16.39■□□□□ 0.21
PSMC6-207ENST00000554952 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.21
PSMC6-207ENST00000554952 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
PSMC6-207ENST00000554952 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
PSMC6-207ENST00000554952 INSRP06213 1382 aa16.38■□□□□ 0.21
PSMC6-207ENST00000554952 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
PSMC6-207ENST00000554952 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
PSMC6-207ENST00000554952 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
PSMC6-207ENST00000554952 FLT4P35916 1363 aa16.38■□□□□ 0.21
PSMC6-207ENST00000554952 ZBTB7AO95365 584 aa16.37■□□□□ 0.21
PSMC6-207ENST00000554952 MYOM1P52179 1685 aa16.37■□□□□ 0.21
PSMC6-207ENST00000554952 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
PSMC6-207ENST00000554952 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
PSMC6-207ENST00000554952 PANK3Q9H999 370 aa16.36■□□□□ 0.21
PSMC6-207ENST00000554952 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
PSMC6-207ENST00000554952 KIF24Q5T7B8 1368 aa16.36■□□□□ 0.21
PSMC6-207ENST00000554952 MEGF6O75095 1541 aa16.35■□□□□ 0.21
PSMC6-207ENST00000554952 LRRC4BQ9NT99 713 aa16.35■□□□□ 0.21
PSMC6-207ENST00000554952 BTAF1O14981 1849 aa16.34■□□□□ 0.21
PSMC6-207ENST00000554952 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
PSMC6-207ENST00000554952 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
PSMC6-207ENST00000554952 ABCB7O75027 752 aa16.32■□□□□ 0.2
PSMC6-207ENST00000554952 KCNQ4P56696 695 aa16.32■□□□□ 0.2
PSMC6-207ENST00000554952 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
PSMC6-207ENST00000554952 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
PSMC6-207ENST00000554952 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
PSMC6-207ENST00000554952 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
PSMC6-207ENST00000554952 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
PSMC6-207ENST00000554952 ZNF827Q17R98 1081 aa16.3■□□□□ 0.2
PSMC6-207ENST00000554952 EYA1Q99502 592 aa16.3■□□□□ 0.2
PSMC6-207ENST00000554952 CYP27B1O15528 508 aa16.29■□□□□ 0.2
PSMC6-207ENST00000554952 PTGER2P43116 358 aa16.29■□□□□ 0.2
PSMC6-207ENST00000554952 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
PSMC6-207ENST00000554952 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
PSMC6-207ENST00000554952 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
PSMC6-207ENST00000554952 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
PSMC6-207ENST00000554952 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
PSMC6-207ENST00000554952 NSD2O96028 1365 aa16.27■□□□□ 0.2
PSMC6-207ENST00000554952 MORC1Q86VD1 984 aa16.27■□□□□ 0.2
PSMC6-207ENST00000554952 TFCP2L1Q9NZI6 479 aa16.27■□□□□ 0.2
PSMC6-207ENST00000554952 SPG7Q9UQ90 795 aa16.27■□□□□ 0.2
PSMC6-207ENST00000554952 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.2
PSMC6-207ENST00000554952 SHANK3Q9BYB0 1731 aa16.27■□□□□ 0.19
PSMC6-207ENST00000554952 DOT1LQ8TEK3 1739 aa16.26■□□□□ 0.19
PSMC6-207ENST00000554952 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
PSMC6-207ENST00000554952 ARXQ96QS3 562 aa16.23■□□□□ 0.19
PSMC6-207ENST00000554952 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
PSMC6-207ENST00000554952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.23■□□□□ 0.199e-9■■□□□ 13.4
PSMC6-207ENST00000554952 PAPPAQ13219 1627 aa16.23■□□□□ 0.19
PSMC6-207ENST00000554952 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
PSMC6-207ENST00000554952 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
PSMC6-207ENST00000554952 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
PSMC6-207ENST00000554952 PIGBQ92521 554 aa16.22■□□□□ 0.19
PSMC6-207ENST00000554952 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
PSMC6-207ENST00000554952 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
PSMC6-207ENST00000554952 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
PSMC6-207ENST00000554952 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
PSMC6-207ENST00000554952 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
PSMC6-207ENST00000554952 ANKRD26Q9UPS8 1709 aa16.2■□□□□ 0.18
PSMC6-207ENST00000554952 SMARCC1Q92922 1105 aaPredicted RBP16.2■□□□□ 0.18
PSMC6-207ENST00000554952 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
PSMC6-207ENST00000554952 PHKG2P15735 406 aa16.19■□□□□ 0.18
PSMC6-207ENST00000554952 HMGB2P26583 209 aaKnown RBP16.19■□□□□ 0.18
PSMC6-207ENST00000554952 POLD1P28340 1107 aa16.19■□□□□ 0.18
PSMC6-207ENST00000554952 LY75O60449 1722 aa16.19■□□□□ 0.18
PSMC6-207ENST00000554952 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
PSMC6-207ENST00000554952 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
PSMC6-207ENST00000554952 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
PSMC6-207ENST00000554952 YY1P25490 414 aa16.17■□□□□ 0.18
PSMC6-207ENST00000554952 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
PSMC6-207ENST00000554952 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
PSMC6-207ENST00000554952 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
PSMC6-207ENST00000554952 PKD1L3Q7Z443 1732 aa16.16■□□□□ 0.18
PSMC6-207ENST00000554952 ITGB4P16144 1822 aa16.15■□□□□ 0.18
PSMC6-207ENST00000554952 AEBP1Q8IUX7 1158 aa16.15■□□□□ 0.18
PSMC6-207ENST00000554952 ASAP1Q9ULH1 1129 aa16.15■□□□□ 0.18
PSMC6-207ENST00000554952 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
PSMC6-207ENST00000554952 PER1O15534 1290 aaPredicted RBP16.14■□□□□ 0.17
PSMC6-207ENST00000554952 SIK1P57059 783 aa16.14■□□□□ 0.17
PSMC6-207ENST00000554952 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
PSMC6-207ENST00000554952 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
PSMC6-207ENST00000554952 CC2D1BQ5T0F9 858 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms