RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
SYNE3-203ENST00000554873 PAXIP1Q6ZW49 1069 aaPredicted RBP19.09■□□□□ 0.65
SYNE3-203ENST00000554873 RBM27Q9P2N5 1060 aaKnown RBP19.09■□□□□ 0.65
SYNE3-203ENST00000554873 CFAP74Q9C0B2 1584 aa19.09■□□□□ 0.65
SYNE3-203ENST00000554873 IGSF3O75054 1194 aa19.08■□□□□ 0.65
SYNE3-203ENST00000554873 CYP2E1P05181 493 aaPredicted RBP19.08■□□□□ 0.65
SYNE3-203ENST00000554873 GPT2Q8TD30 523 aa19.08■□□□□ 0.65
SYNE3-203ENST00000554873 VAMP4O75379 141 aa19.08■□□□□ 0.64
SYNE3-203ENST00000554873 SLC20A2Q08357 652 aa19.08■□□□□ 0.64
SYNE3-203ENST00000554873 IRX5P78411 483 aaPredicted RBP19.07■□□□□ 0.64
SYNE3-203ENST00000554873 PHACTR3Q96KR7 559 aa19.07■□□□□ 0.64
SYNE3-203ENST00000554873 SYCE3A1L190 88 aa19.07■□□□□ 0.64
SYNE3-203ENST00000554873 GABPB1Q06547 395 aaPredicted RBP19.07■□□□□ 0.64
SYNE3-203ENST00000554873 MRPL50Q8N5N7 158 aaKnown RBP19.07■□□□□ 0.64
SYNE3-203ENST00000554873 ZNF428Q96B54 188 aa19.07■□□□□ 0.64
SYNE3-203ENST00000554873 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
SYNE3-203ENST00000554873 C1orf115Q9H7X2 142 aa19.07■□□□□ 0.64
SYNE3-203ENST00000554873 PPIP5K1Q6PFW1 1433 aa19.07■□□□□ 0.64
SYNE3-203ENST00000554873 YTHDC2Q9H6S0 1430 aaKnown RBP19.07■□□□□ 0.64
SYNE3-203ENST00000554873 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
SYNE3-203ENST00000554873 U2AF2P26368 475 aaKnown RBP eCLIP19.06■□□□□ 0.643e-6■■■■□ 21.1
SYNE3-203ENST00000554873 ANKRD7Q92527 254 aa19.06■□□□□ 0.64
SYNE3-203ENST00000554873 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
SYNE3-203ENST00000554873 FAM177BA6PVY3 158 aa19.06■□□□□ 0.64
SYNE3-203ENST00000554873 PRPF40AO75400 957 aaKnown RBP19.06■□□□□ 0.64
SYNE3-203ENST00000554873 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
SYNE3-203ENST00000554873 FKBP5Q13451 457 aaPredicted RBP19.06■□□□□ 0.64
SYNE3-203ENST00000554873 OGFRQ9NZT2 677 aa19.06■□□□□ 0.64
SYNE3-203ENST00000554873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
SYNE3-203ENST00000554873 GCC1Q96CN9 775 aa19.05■□□□□ 0.64
SYNE3-203ENST00000554873 RBM42Q9BTD8 480 aaKnown RBP19.05■□□□□ 0.64
SYNE3-203ENST00000554873 TMEM63CQ9P1W3 806 aa19.05■□□□□ 0.64
SYNE3-203ENST00000554873 LRRC7Q96NW7 1537 aa19.05■□□□□ 0.64
SYNE3-203ENST00000554873 MYO5BQ9ULV0 1848 aa19.05■□□□□ 0.64
SYNE3-203ENST00000554873 SPTLC3Q9NUV7 552 aa19.05■□□□□ 0.64
SYNE3-203ENST00000554873 FAM135BQ49AJ0 1406 aa19.04■□□□□ 0.64
SYNE3-203ENST00000554873 HMOX1P09601 288 aa19.04■□□□□ 0.64
SYNE3-203ENST00000554873 NFE2L2Q16236 605 aa19.04■□□□□ 0.64
SYNE3-203ENST00000554873 ARHGAP45Q92619 1136 aa19.04■□□□□ 0.64
SYNE3-203ENST00000554873 SIRT2Q8IXJ6 389 aa19.04■□□□□ 0.64
SYNE3-203ENST00000554873 RNF214Q8ND24 703 aa19.04■□□□□ 0.64
SYNE3-203ENST00000554873 DNAJC2Q99543 621 aaKnown RBP19.03■□□□□ 0.64
SYNE3-203ENST00000554873 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
SYNE3-203ENST00000554873 ELL2O00472 640 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-203ENST00000554873 KCNJ4P48050 445 aa19.03■□□□□ 0.64
SYNE3-203ENST00000554873 CCDC66A2RUB6 948 aa19.02■□□□□ 0.64
SYNE3-203ENST00000554873 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
SYNE3-203ENST00000554873 DIAPH3Q9NSV4 1193 aa19.02■□□□□ 0.64
SYNE3-203ENST00000554873 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
SYNE3-203ENST00000554873 DIP2CQ9Y2E4 1556 aa19.01■□□□□ 0.63
SYNE3-203ENST00000554873 PIK3R4Q99570 1358 aa19.01■□□□□ 0.63
SYNE3-203ENST00000554873 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
SYNE3-203ENST00000554873 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
SYNE3-203ENST00000554873 TSPY26PQ9H489 355 aa19■□□□□ 0.63
SYNE3-203ENST00000554873 CWC22Q9HCG8 908 aaKnown RBP19■□□□□ 0.63
SYNE3-203ENST00000554873 MBD3O95983 291 aa19■□□□□ 0.63
SYNE3-203ENST00000554873 MBIPQ9NS73 344 aa19■□□□□ 0.63
SYNE3-203ENST00000554873 PTCH1Q13635 1447 aa19■□□□□ 0.63
SYNE3-203ENST00000554873 GNAI1P63096 354 aa18.99■□□□□ 0.63
SYNE3-203ENST00000554873 ZNF853P0CG23 659 aa18.99■□□□□ 0.63
SYNE3-203ENST00000554873 FBXO31Q5XUX0 539 aaPredicted RBP18.99■□□□□ 0.63
SYNE3-203ENST00000554873 IFT57Q9NWB7 429 aa18.99■□□□□ 0.63
SYNE3-203ENST00000554873 KIF20BQ96Q89 1820 aa18.98■□□□□ 0.63
SYNE3-203ENST00000554873 ABCC4O15439 1325 aa18.98■□□□□ 0.63
SYNE3-203ENST00000554873 CTIFO43310 598 aaKnown RBP18.98■□□□□ 0.63
SYNE3-203ENST00000554873 CHAF1AQ13111 956 aaPredicted RBP18.98■□□□□ 0.63
SYNE3-203ENST00000554873 SLFN14P0C7P3 912 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 PKP1Q13835 747 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 WAPLQ7Z5K2 1190 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 NEO1Q92859 1461 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 AK9Q5TCS8 1911 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 IL13P35225 146 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 RABEP1Q15276 862 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 TIGD1Q96MW7 591 aa18.97■□□□□ 0.63
SYNE3-203ENST00000554873 C8orf58Q8NAV2 365 aa18.96■□□□□ 0.63
SYNE3-203ENST00000554873 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
SYNE3-203ENST00000554873 RIOK3O14730 519 aaKnown RBP18.96■□□□□ 0.63
SYNE3-203ENST00000554873 TWISTNBQ3B726 338 aaPredicted RBP18.96■□□□□ 0.63
SYNE3-203ENST00000554873 MAP2P11137 1827 aaKnown RBP18.96■□□□□ 0.63
SYNE3-203ENST00000554873 UVSSAQ2YD98 709 aa18.95■□□□□ 0.62
SYNE3-203ENST00000554873 C17orf53Q8N3J3 647 aaPredicted RBP18.95■□□□□ 0.62
SYNE3-203ENST00000554873 YEATS2Q9ULM3 1422 aa18.95■□□□□ 0.62
SYNE3-203ENST00000554873 NSFL1CQ9UNZ2 370 aaKnown RBP18.95■□□□□ 0.62
SYNE3-203ENST00000554873 TTC12Q9H892 705 aaPredicted RBP18.95■□□□□ 0.62
SYNE3-203ENST00000554873 PREX1Q8TCU6 1659 aa18.94■□□□□ 0.62
SYNE3-203ENST00000554873 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
SYNE3-203ENST00000554873 CDC45O75419 566 aa18.93■□□□□ 0.62
SYNE3-203ENST00000554873 FAM184AQ8NB25 1140 aa18.93■□□□□ 0.62
SYNE3-203ENST00000554873 CFAP44Q96MT7 982 aa18.93■□□□□ 0.62
SYNE3-203ENST00000554873 GSPT1P15170 499 aaKnown RBP18.93■□□□□ 0.62
SYNE3-203ENST00000554873 IRX3P78415 501 aaPredicted RBP18.93■□□□□ 0.62
SYNE3-203ENST00000554873 ZRANB1Q9UGI0 708 aa18.93■□□□□ 0.62
SYNE3-203ENST00000554873 NME9Q86XW9 330 aa18.92■□□□□ 0.62
SYNE3-203ENST00000554873 PLEKHM2Q8IWE5 1019 aa18.92■□□□□ 0.62
SYNE3-203ENST00000554873 SYAP1Q96A49 352 aaPredicted RBP18.92■□□□□ 0.62
SYNE3-203ENST00000554873 API5Q9BZZ5 524 aaKnown RBP18.92■□□□□ 0.62
SYNE3-203ENST00000554873 CTNNA3Q9UI47 895 aa18.92■□□□□ 0.62
SYNE3-203ENST00000554873 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
SYNE3-203ENST00000554873 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms