RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 KCNQ4P56696 695 aa25.51■■□□□ 1.67
PRKCH-210ENST00000554835 NBPF6Q5VWK0 638 aa25.51■■□□□ 1.67
PRKCH-210ENST00000554835 NBPF4Q96M43 638 aa25.51■■□□□ 1.67
PRKCH-210ENST00000554835 RTL1A6NKG5 1358 aa25.5■■□□□ 1.67
PRKCH-210ENST00000554835 ZCRB1Q8TBF4 217 aaKnown RBP25.5■■□□□ 1.67
PRKCH-210ENST00000554835 TMF1P82094 1093 aa25.49■■□□□ 1.67
PRKCH-210ENST00000554835 SLC27A3Q5K4L6 730 aa25.49■■□□□ 1.67
PRKCH-210ENST00000554835 SYTL4Q96C24 671 aaPredicted RBP25.48■■□□□ 1.67
PRKCH-210ENST00000554835 ARXQ96QS3 562 aa25.48■■□□□ 1.67
PRKCH-210ENST00000554835 QSER1Q2KHR3 1735 aa25.48■■□□□ 1.67
PRKCH-210ENST00000554835 TUBGCP6Q96RT7 1819 aa25.47■■□□□ 1.67
PRKCH-210ENST00000554835 LY75O60449 1722 aa25.47■■□□□ 1.67
PRKCH-210ENST00000554835 USHBP1Q8N6Y0 703 aa25.47■■□□□ 1.67
PRKCH-210ENST00000554835 PNPLA7Q6ZV29 1317 aa25.46■■□□□ 1.67
PRKCH-210ENST00000554835 COL24A1Q17RW2 1714 aa25.44■■□□□ 1.66
PRKCH-210ENST00000554835 TRIM26Q12899 539 aaPredicted RBP25.44■■□□□ 1.66
PRKCH-210ENST00000554835 HSP90AB2PQ58FF8 381 aa25.44■■□□□ 1.66
PRKCH-210ENST00000554835 KIF20BQ96Q89 1820 aa25.44■■□□□ 1.66
PRKCH-210ENST00000554835 MAP3K5Q99683 1374 aa25.44■■□□□ 1.66
PRKCH-210ENST00000554835 CARD14Q9BXL6 1004 aa25.42■■□□□ 1.66
PRKCH-210ENST00000554835 INSRP06213 1382 aa25.41■■□□□ 1.66
PRKCH-210ENST00000554835 SLC16A10Q8TF71 515 aa25.4■■□□□ 1.66
PRKCH-210ENST00000554835 TFCP2L1Q9NZI6 479 aa25.4■■□□□ 1.66
PRKCH-210ENST00000554835 CGNL1Q0VF96 1302 aa25.39■■□□□ 1.66
PRKCH-210ENST00000554835 SMG6Q86US8 1419 aaKnown RBP25.38■■□□□ 1.65
PRKCH-210ENST00000554835 RAPGEF4Q8WZA2 1011 aa25.38■■□□□ 1.65
PRKCH-210ENST00000554835 FLT4P35916 1363 aa25.38■■□□□ 1.65
PRKCH-210ENST00000554835 ZNF784Q8NCA9 323 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-210ENST00000554835 CCNL1Q9UK58 526 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-210ENST00000554835 CHD4Q14839 1912 aa25.37■■□□□ 1.65
PRKCH-210ENST00000554835 KIF24Q5T7B8 1368 aa25.35■■□□□ 1.65
PRKCH-210ENST00000554835 TATP17735 454 aaPredicted RBP25.35■■□□□ 1.65
PRKCH-210ENST00000554835 CDCA8Q53HL2 280 aa25.35■■□□□ 1.65
PRKCH-210ENST00000554835 EMILIN1Q9Y6C2 1016 aa25.35■■□□□ 1.65
PRKCH-210ENST00000554835 NSD3Q9BZ95 1437 aa25.34■■□□□ 1.65
PRKCH-210ENST00000554835 CYP27B1O15528 508 aa25.33■■□□□ 1.65
PRKCH-210ENST00000554835 POLD1P28340 1107 aa25.32■■□□□ 1.64
PRKCH-210ENST00000554835 COL23A1Q86Y22 540 aaPredicted RBP25.32■■□□□ 1.64
PRKCH-210ENST00000554835 PCDH11XQ9BZA7 1347 aa25.32■■□□□ 1.64
PRKCH-210ENST00000554835 PCDH11YQ9BZA8 1340 aa25.32■■□□□ 1.64
PRKCH-210ENST00000554835 TOGARAM1Q9Y4F4 1720 aa25.32■■□□□ 1.64
PRKCH-210ENST00000554835 KLHL34Q8N239 644 aa25.3■■□□□ 1.64
PRKCH-210ENST00000554835 C5P01031 1676 aa25.29■■□□□ 1.64
PRKCH-210ENST00000554835 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
PRKCH-210ENST00000554835 ANKRD26Q9UPS8 1709 aa25.29■■□□□ 1.64
PRKCH-210ENST00000554835 NLGN2Q8NFZ4 835 aa25.29■■□□□ 1.64
PRKCH-210ENST00000554835 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
PRKCH-210ENST00000554835 ITGB4P16144 1822 aa25.28■■□□□ 1.64
PRKCH-210ENST00000554835 TAF1LQ8IZX4 1826 aa25.28■■□□□ 1.64
PRKCH-210ENST00000554835 GPR162Q16538 588 aa25.27■■□□□ 1.64
PRKCH-210ENST00000554835 MPRIPQ6WCQ1 1025 aa25.27■■□□□ 1.64
PRKCH-210ENST00000554835 PALLDQ8WX93 1383 aa25.27■■□□□ 1.64
PRKCH-210ENST00000554835 MAP2P11137 1827 aaKnown RBP25.25■■□□□ 1.63
PRKCH-210ENST00000554835 PPM1GO15355 546 aaPredicted RBP25.24■■□□□ 1.63
PRKCH-210ENST00000554835 TIMELESSQ9UNS1 1208 aa25.24■■□□□ 1.63
PRKCH-210ENST00000554835 WASHC2AQ641Q2 1341 aa25.23■■□□□ 1.63
PRKCH-210ENST00000554835 MSH5O43196 834 aa25.23■■□□□ 1.63
PRKCH-210ENST00000554835 MSL1Q68DK7 614 aa25.23■■□□□ 1.63
PRKCH-210ENST00000554835 NKX1-1Q15270 411 aaPredicted RBP25.22■■□□□ 1.63
PRKCH-210ENST00000554835 AMIGO3Q86WK7 504 aa25.22■■□□□ 1.63
PRKCH-210ENST00000554835 EYA1Q99502 592 aa25.22■■□□□ 1.63
PRKCH-210ENST00000554835 PIGBQ92521 554 aa25.21■■□□□ 1.63
PRKCH-210ENST00000554835 POLKQ9UBT6 870 aa25.21■■□□□ 1.63
PRKCH-210ENST00000554835 PELP1Q8IZL8 1130 aaKnown RBP25.2■■□□□ 1.62
PRKCH-210ENST00000554835 C4BP0C0L5 1744 aa25.2■■□□□ 1.62
PRKCH-210ENST00000554835 YBX3P16989 372 aaKnown RBP eCLIP25.19■■□□□ 1.62
PRKCH-210ENST00000554835 SMIM5Q71RC9 77 aa25.17■■□□□ 1.62
PRKCH-210ENST00000554835 UBR3Q6ZT12 1888 aa25.16■■□□□ 1.62
PRKCH-210ENST00000554835 SMARCC1Q92922 1105 aaPredicted RBP25.16■■□□□ 1.62
PRKCH-210ENST00000554835 SPG7Q9UQ90 795 aa25.16■■□□□ 1.62
PRKCH-210ENST00000554835 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
PRKCH-210ENST00000554835 FLAD1Q8NFF5 587 aa25.14■■□□□ 1.62
PRKCH-210ENST00000554835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.14■■□□□ 1.62
PRKCH-210ENST00000554835 TNNT2P45379 298 aaPredicted RBP25.13■■□□□ 1.61
PRKCH-210ENST00000554835 EIF4A2Q14240 407 aaKnown RBP25.13■■□□□ 1.61
PRKCH-210ENST00000554835 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
PRKCH-210ENST00000554835 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
PRKCH-210ENST00000554835 PHKG2P15735 406 aa25.12■■□□□ 1.61
PRKCH-210ENST00000554835 LINC00116Q8NCU8 138 aa25.12■■□□□ 1.61
PRKCH-210ENST00000554835 ASAP1Q9ULH1 1129 aa25.12■■□□□ 1.61
PRKCH-210ENST00000554835 LOC102724428A0A0B4J2F2 783 aa25.11■■□□□ 1.61
PRKCH-210ENST00000554835 SIK1P57059 783 aa25.11■■□□□ 1.61
PRKCH-210ENST00000554835 AK7Q96M32 723 aa25.11■■□□□ 1.61
PRKCH-210ENST00000554835 HMGB2P26583 209 aaKnown RBP25.1■■□□□ 1.61
PRKCH-210ENST00000554835 C1QTNF8P60827 252 aa25.1■■□□□ 1.61
PRKCH-210ENST00000554835 CD2APQ9Y5K6 639 aa25.1■■□□□ 1.61
PRKCH-210ENST00000554835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.09■■□□□ 1.61
PRKCH-210ENST00000554835 PHF14O94880 888 aa25.09■■□□□ 1.61
PRKCH-210ENST00000554835 ITPK1Q13572 414 aa25.09■■□□□ 1.61
PRKCH-210ENST00000554835 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
PRKCH-210ENST00000554835 TMOD3Q9NYL9 352 aa25.09■■□□□ 1.61
PRKCH-210ENST00000554835 GRIN3BO60391 1043 aa25.07■■□□□ 1.6
PRKCH-210ENST00000554835 HSPA5P11021 654 aaKnown RBP25.07■■□□□ 1.6
PRKCH-210ENST00000554835 PANK3Q9H999 370 aa25.06■■□□□ 1.6
PRKCH-210ENST00000554835 ATG3Q9NT62 314 aa25.06■■□□□ 1.6
PRKCH-210ENST00000554835 IGSF1Q8N6C5 1336 aa25.06■■□□□ 1.6
PRKCH-210ENST00000554835 SSFA2P28290 1259 aa25.05■■□□□ 1.6
PRKCH-210ENST00000554835 ATP6V1AP38606 617 aa25.03■■□□□ 1.6
PRKCH-210ENST00000554835 EIF4G2P78344 907 aaKnown RBP eCLIP25.03■■□□□ 1.6
PRKCH-210ENST00000554835 SLC4A9Q96Q91 983 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms