RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
ATXN3-228ENST00000554592 HPS1Q92902 700 aa8.2□□□□□ -1.1
ATXN3-228ENST00000554592 C1QTNF2Q9BXJ5 285 aa8.2□□□□□ -1.1
ATXN3-228ENST00000554592 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-228ENST00000554592 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
ATXN3-228ENST00000554592 OCSTAMPQ9BR26 566 aa8.19□□□□□ -1.1
ATXN3-228ENST00000554592 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
ATXN3-228ENST00000554592 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
ATXN3-228ENST00000554592 TLL2Q9Y6L7 1015 aa8.19□□□□□ -1.1
ATXN3-228ENST00000554592 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
ATXN3-228ENST00000554592 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
ATXN3-228ENST00000554592 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
ATXN3-228ENST00000554592 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-228ENST00000554592 DACH1Q9UI36 760 aa8.18□□□□□ -1.1
ATXN3-228ENST00000554592 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
ATXN3-228ENST00000554592 CTC1Q2NKJ3 1217 aa8.17□□□□□ -1.1
ATXN3-228ENST00000554592 PDXDC2PQ6P474 469 aa8.17□□□□□ -1.1
ATXN3-228ENST00000554592 BPHLQ86WA6 291 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-228ENST00000554592 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
ATXN3-228ENST00000554592 POTECB2RU33 542 aa8.16□□□□□ -1.1
ATXN3-228ENST00000554592 BCORL1Q5H9F3 1711 aa8.16□□□□□ -1.1
ATXN3-228ENST00000554592 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
ATXN3-228ENST00000554592 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
ATXN3-228ENST00000554592 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
ATXN3-228ENST00000554592 YEATS2Q9ULM3 1422 aa8.16□□□□□ -1.1
ATXN3-228ENST00000554592 FANCAO15360 1455 aa8.15□□□□□ -1.1
ATXN3-228ENST00000554592 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
ATXN3-228ENST00000554592 GRM5P41594 1212 aa8.15□□□□□ -1.1
ATXN3-228ENST00000554592 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-228ENST00000554592 TRMT44Q8IYL2 757 aaKnown RBP8.15□□□□□ -1.1
ATXN3-228ENST00000554592 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
ATXN3-228ENST00000554592 AXIN1O15169 862 aa8.14□□□□□ -1.11
ATXN3-228ENST00000554592 BANK1Q8NDB2 785 aa8.14□□□□□ -1.11
ATXN3-228ENST00000554592 KLF16Q9BXK1 252 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-228ENST00000554592 ADH1CP00326 375 aa8.13□□□□□ -1.11
ATXN3-228ENST00000554592 AGERQ15109 404 aa8.13□□□□□ -1.11
ATXN3-228ENST00000554592 ERFEQ4G0M1 354 aa8.13□□□□□ -1.11
ATXN3-228ENST00000554592 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-228ENST00000554592 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
ATXN3-228ENST00000554592 GPR37L1O60883 481 aa8.12□□□□□ -1.11
ATXN3-228ENST00000554592 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
ATXN3-228ENST00000554592 GPSM3Q9Y4H4 160 aa8.12□□□□□ -1.11
ATXN3-228ENST00000554592 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
ATXN3-228ENST00000554592 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
ATXN3-228ENST00000554592 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 NR3C2P08235 984 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-228ENST00000554592 NNTQ13423 1086 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 MTMR14Q8NCE2 650 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 SNRKQ9NRH2 765 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 MAP4K5Q9Y4K4 846 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 ATP10AO60312 1499 aa8.11□□□□□ -1.11
ATXN3-228ENST00000554592 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
ATXN3-228ENST00000554592 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
ATXN3-228ENST00000554592 RIMS1Q86UR5 1692 aaKnown RBP8.1□□□□□ -1.11
ATXN3-228ENST00000554592 PTPRTO14522 1441 aa8.1□□□□□ -1.11
ATXN3-228ENST00000554592 ZFYVE16Q7Z3T8 1539 aa8.09□□□□□ -1.11
ATXN3-228ENST00000554592 NR5A1Q13285 461 aa8.09□□□□□ -1.11
ATXN3-228ENST00000554592 ARID5BQ14865 1188 aa8.09□□□□□ -1.11
ATXN3-228ENST00000554592 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
ATXN3-228ENST00000554592 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
ATXN3-228ENST00000554592 PLCH2O75038 1416 aa8.09□□□□□ -1.11
ATXN3-228ENST00000554592 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
ATXN3-228ENST00000554592 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
ATXN3-228ENST00000554592 TIMP2P16035 220 aa8.08□□□□□ -1.12
ATXN3-228ENST00000554592 PTK2Q05397 1052 aa8.08□□□□□ -1.12
ATXN3-228ENST00000554592 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
ATXN3-228ENST00000554592 GMPR2Q9P2T1 348 aaKnown RBP8.08□□□□□ -1.12
ATXN3-228ENST00000554592 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
ATXN3-228ENST00000554592 CTTNBP2Q8WZ74 1663 aa8.08□□□□□ -1.12
ATXN3-228ENST00000554592 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
ATXN3-228ENST00000554592 CAPN5O15484 640 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-228ENST00000554592 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
ATXN3-228ENST00000554592 CDK11AQ9UQ88 783 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-228ENST00000554592 ARHGEF12Q9NZN5 1544 aa8.07□□□□□ -1.12
ATXN3-228ENST00000554592 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
ATXN3-228ENST00000554592 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-228ENST00000554592 TRIM46Q7Z4K8 759 aa8.06□□□□□ -1.12
ATXN3-228ENST00000554592 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
ATXN3-228ENST00000554592 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-228ENST00000554592 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
ATXN3-228ENST00000554592 FSHRP23945 695 aa8.05□□□□□ -1.12
ATXN3-228ENST00000554592 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
ATXN3-228ENST00000554592 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
ATXN3-228ENST00000554592 TTC37Q6PGP7 1564 aa8.05□□□□□ -1.12
ATXN3-228ENST00000554592 TRAPPC8Q9Y2L5 1435 aa8.04□□□□□ -1.12
ATXN3-228ENST00000554592 HECW1Q76N89 1606 aa8.04□□□□□ -1.12
ATXN3-228ENST00000554592 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
ATXN3-228ENST00000554592 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
ATXN3-228ENST00000554592 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
ATXN3-228ENST00000554592 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
ATXN3-228ENST00000554592 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
ATXN3-228ENST00000554592 CFAP74Q9C0B2 1584 aa8.03□□□□□ -1.12
ATXN3-228ENST00000554592 ZBBXA8MT70 800 aa8.03□□□□□ -1.12
ATXN3-228ENST00000554592 FBXO45P0C2W1 286 aa8.03□□□□□ -1.12
ATXN3-228ENST00000554592 BMP1P13497 986 aa8.03□□□□□ -1.12
ATXN3-228ENST00000554592 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-228ENST00000554592 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms