RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 FYB1O15117 783 aa37.16■■■■□ 3.54
KTN1-215ENST00000554567 KLHL34Q8N239 644 aa37.16■■■■□ 3.54
KTN1-215ENST00000554567 USHBP1Q8N6Y0 703 aa37.16■■■■□ 3.54
KTN1-215ENST00000554567 NBPF6Q5VWK0 638 aa37.15■■■■□ 3.54
KTN1-215ENST00000554567 NBPF4Q96M43 638 aa37.15■■■■□ 3.54
KTN1-215ENST00000554567 MEGF6O75095 1541 aa37.15■■■■□ 3.54
KTN1-215ENST00000554567 DOT1LQ8TEK3 1739 aa37.13■■■■□ 3.54
KTN1-215ENST00000554567 SLC16A10Q8TF71 515 aa37.13■■■■□ 3.53
KTN1-215ENST00000554567 PNPLA7Q6ZV29 1317 aa37.12■■■■□ 3.53
KTN1-215ENST00000554567 ZNF784Q8NCA9 323 aaPredicted RBP37.12■■■■□ 3.53
KTN1-215ENST00000554567 POLD1P28340 1107 aa37.11■■■■□ 3.53
KTN1-215ENST00000554567 RTL1A6NKG5 1358 aa37.11■■■■□ 3.53
KTN1-215ENST00000554567 NSD2O96028 1365 aa37.09■■■■□ 3.53
KTN1-215ENST00000554567 USP47Q96K76 1375 aa37.09■■■■□ 3.53
KTN1-215ENST00000554567 RAPGEF4Q8WZA2 1011 aa37.09■■■■□ 3.53
KTN1-215ENST00000554567 SHANK3Q9BYB0 1731 aa37.08■■■■□ 3.53
KTN1-215ENST00000554567 CCNL1Q9UK58 526 aaPredicted RBP37.08■■■■□ 3.53
KTN1-215ENST00000554567 MAP3K5Q99683 1374 aa37.07■■■■□ 3.53
KTN1-215ENST00000554567 GPR162Q16538 588 aa37.07■■■■□ 3.52
KTN1-215ENST00000554567 SMG6Q86US8 1419 aaKnown RBP37.06■■■■□ 3.52
KTN1-215ENST00000554567 HSP90AB2PQ58FF8 381 aa37.05■■■■□ 3.52
KTN1-215ENST00000554567 MSH5O43196 834 aa37.04■■■■□ 3.52
KTN1-215ENST00000554567 TATP17735 454 aaPredicted RBP37.04■■■■□ 3.52
KTN1-215ENST00000554567 QSER1Q2KHR3 1735 aa37.04■■■■□ 3.52
KTN1-215ENST00000554567 LY75O60449 1722 aa37.03■■■■□ 3.52
KTN1-215ENST00000554567 CGNL1Q0VF96 1302 aa37.03■■■■□ 3.52
KTN1-215ENST00000554567 TUBGCP6Q96RT7 1819 aa37.02■■■■□ 3.52
KTN1-215ENST00000554567 PELP1Q8IZL8 1130 aaKnown RBP37.02■■■■□ 3.52
KTN1-215ENST00000554567 CHD4Q14839 1912 aa37.01■■■■□ 3.52
KTN1-215ENST00000554567 CDCA8Q53HL2 280 aa37■■■■□ 3.51
KTN1-215ENST00000554567 INSRP06213 1382 aa36.98■■■■□ 3.51
KTN1-215ENST00000554567 FLT4P35916 1363 aa36.95■■■■□ 3.51
KTN1-215ENST00000554567 KIF20BQ96Q89 1820 aa36.95■■■■□ 3.51
KTN1-215ENST00000554567 COL23A1Q86Y22 540 aaPredicted RBP36.95■■■■□ 3.51
KTN1-215ENST00000554567 PCDH11XQ9BZA7 1347 aa36.94■■■■□ 3.5
KTN1-215ENST00000554567 PCDH11YQ9BZA8 1340 aa36.94■■■■□ 3.5
KTN1-215ENST00000554567 TRIM26Q12899 539 aaPredicted RBP36.94■■■■□ 3.5
KTN1-215ENST00000554567 NLGN2Q8NFZ4 835 aa36.93■■■■□ 3.5
KTN1-215ENST00000554567 CARD14Q9BXL6 1004 aa36.93■■■■□ 3.5
KTN1-215ENST00000554567 MPRIPQ6WCQ1 1025 aa36.92■■■■□ 3.5
KTN1-215ENST00000554567 COL24A1Q17RW2 1714 aa36.91■■■■□ 3.5
KTN1-215ENST00000554567 PPM1GO15355 546 aaPredicted RBP36.91■■■■□ 3.5
KTN1-215ENST00000554567 EMILIN1Q9Y6C2 1016 aa36.91■■■■□ 3.5
KTN1-215ENST00000554567 MSL1Q68DK7 614 aa36.9■■■■□ 3.5
KTN1-215ENST00000554567 CYP27B1O15528 508 aa36.88■■■■□ 3.49
KTN1-215ENST00000554567 KIF24Q5T7B8 1368 aa36.88■■■■□ 3.49
KTN1-215ENST00000554567 NSD3Q9BZ95 1437 aa36.87■■■■□ 3.49
KTN1-215ENST00000554567 PALLDQ8WX93 1383 aa36.86■■■■□ 3.49
KTN1-215ENST00000554567 C5P01031 1676 aa36.81■■■■□ 3.48
KTN1-215ENST00000554567 GOLGB1Q14789 3259 aaKnown RBP36.79■■■■□ 3.48
KTN1-215ENST00000554567 C1QTNF8P60827 252 aa36.78■■■■□ 3.48
KTN1-215ENST00000554567 SMARCC1Q92922 1105 aaPredicted RBP36.78■■■■□ 3.48
KTN1-215ENST00000554567 YBX3P16989 372 aaKnown RBP eCLIP36.77■■■■□ 3.48
KTN1-215ENST00000554567 HMGB2P26583 209 aaKnown RBP36.77■■■■□ 3.48
KTN1-215ENST00000554567 FLAD1Q8NFF5 587 aa36.77■■■■□ 3.48
KTN1-215ENST00000554567 PIGBQ92521 554 aa36.76■■■■□ 3.48
KTN1-215ENST00000554567 POLR3GLQ9BT43 218 aa36.76■■■■□ 3.48
KTN1-215ENST00000554567 SPG7Q9UQ90 795 aa36.76■■■■□ 3.48
KTN1-215ENST00000554567 AK7Q96M32 723 aa36.75■■■■□ 3.47
KTN1-215ENST00000554567 ITGB4P16144 1822 aa36.75■■■■□ 3.47
KTN1-215ENST00000554567 TOGARAM1Q9Y4F4 1720 aa36.74■■■■□ 3.47
KTN1-215ENST00000554567 SENP3-EIF4A1A0A087X0R7 540 aa36.74■■■■□ 3.47
KTN1-215ENST00000554567 TAF1LQ8IZX4 1826 aa36.73■■■■□ 3.47
KTN1-215ENST00000554567 GRIN3BO60391 1043 aa36.73■■■■□ 3.47
KTN1-215ENST00000554567 EYA1Q99502 592 aa36.73■■■■□ 3.47
KTN1-215ENST00000554567 WASHC2AQ641Q2 1341 aa36.72■■■■□ 3.47
KTN1-215ENST00000554567 PKD1L3Q7Z443 1732 aa36.71■■■■□ 3.47
KTN1-215ENST00000554567 PHF14O94880 888 aa36.71■■■■□ 3.47
KTN1-215ENST00000554567 SMIM5Q71RC9 77 aa36.71■■■■□ 3.47
KTN1-215ENST00000554567 NKX1-1Q15270 411 aaPredicted RBP36.7■■■■□ 3.47
KTN1-215ENST00000554567 AMIGO3Q86WK7 504 aa36.69■■■■□ 3.46
KTN1-215ENST00000554567 MAP2P11137 1827 aaKnown RBP36.69■■■■□ 3.46
KTN1-215ENST00000554567 C4BP0C0L5 1744 aa36.68■■■■□ 3.46
KTN1-215ENST00000554567 TNNT2P45379 298 aaPredicted RBP36.68■■■■□ 3.46
KTN1-215ENST00000554567 POLKQ9UBT6 870 aa36.68■■■■□ 3.46
KTN1-215ENST00000554567 CD2APQ9Y5K6 639 aa36.68■■■■□ 3.46
KTN1-215ENST00000554567 NCAPD2Q15021 1401 aa36.68■■■■□ 3.46
KTN1-215ENST00000554567 GIGYF1O75420 1035 aaPredicted RBP36.67■■■■□ 3.46
KTN1-215ENST00000554567 TIMELESSQ9UNS1 1208 aa36.67■■■■□ 3.46
KTN1-215ENST00000554567 TMOD3Q9NYL9 352 aa36.66■■■■□ 3.46
KTN1-215ENST00000554567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.64■■■■□ 3.46
KTN1-215ENST00000554567 LOC102724428A0A0B4J2F2 783 aa36.64■■■■□ 3.46
KTN1-215ENST00000554567 SIK1P57059 783 aa36.64■■■■□ 3.46
KTN1-215ENST00000554567 ANKRD26Q9UPS8 1709 aa36.63■■■■□ 3.45
KTN1-215ENST00000554567 PCGF6Q9BYE7 350 aa36.63■■■■□ 3.45
KTN1-215ENST00000554567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.63■■■■□ 3.457e-10■■■■■ 32.9
KTN1-215ENST00000554567 ASAP1Q9ULH1 1129 aa36.63■■■■□ 3.45
KTN1-215ENST00000554567 IFNL2Q8IZJ0 200 aa36.62■■■■□ 3.45
KTN1-215ENST00000554567 LINC00116Q8NCU8 138 aa36.62■■■■□ 3.45
KTN1-215ENST00000554567 PHKG2P15735 406 aa36.6■■■■□ 3.45
KTN1-215ENST00000554567 EIF4A2Q14240 407 aaKnown RBP36.59■■■■□ 3.45
KTN1-215ENST00000554567 UBR3Q6ZT12 1888 aa36.58■■■■□ 3.45
KTN1-215ENST00000554567 ATP6V1AP38606 617 aa36.57■■■■□ 3.44
KTN1-215ENST00000554567 WWC3Q9ULE0 1092 aa36.57■■■■□ 3.44
KTN1-215ENST00000554567 SSFA2P28290 1259 aa36.56■■■■□ 3.44
KTN1-215ENST00000554567 ITPK1Q13572 414 aa36.56■■■■□ 3.44
KTN1-215ENST00000554567 GNPATO15228 680 aa36.55■■■■□ 3.44
KTN1-215ENST00000554567 ATG3Q9NT62 314 aa36.54■■■■□ 3.44
KTN1-215ENST00000554567 IGSF1Q8N6C5 1336 aa36.5■■■■□ 3.43
KTN1-215ENST00000554567 PANK3Q9H999 370 aa36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms