RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.09
NPC2-205ENST00000554482 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
NPC2-205ENST00000554482 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
NPC2-205ENST00000554482 ARXQ96QS3 562 aa15.63■□□□□ 0.09
NPC2-205ENST00000554482 KIF20BQ96Q89 1820 aa15.62■□□□□ 0.09
NPC2-205ENST00000554482 PRIM1P49642 420 aaKnown RBP15.62■□□□□ 0.09
NPC2-205ENST00000554482 KCNQ4P56696 695 aa15.62■□□□□ 0.09
NPC2-205ENST00000554482 SLC27A3Q5K4L6 730 aa15.62■□□□□ 0.09
NPC2-205ENST00000554482 USHBP1Q8N6Y0 703 aa15.62■□□□□ 0.09
NPC2-205ENST00000554482 ZCRB1Q8TBF4 217 aaKnown RBP15.62■□□□□ 0.09
NPC2-205ENST00000554482 SGIP1Q9BQI5 828 aa15.62■□□□□ 0.09
NPC2-205ENST00000554482 FYB1O15117 783 aa15.6■□□□□ 0.09
NPC2-205ENST00000554482 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
NPC2-205ENST00000554482 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
NPC2-205ENST00000554482 TFCP2L1Q9NZI6 479 aa15.6■□□□□ 0.09
NPC2-205ENST00000554482 QSER1Q2KHR3 1735 aa15.6■□□□□ 0.09
NPC2-205ENST00000554482 KCNA4P22459 653 aa15.59■□□□□ 0.09
NPC2-205ENST00000554482 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
NPC2-205ENST00000554482 NBPF6Q5VWK0 638 aa15.59■□□□□ 0.09
NPC2-205ENST00000554482 NBPF4Q96M43 638 aa15.59■□□□□ 0.09
NPC2-205ENST00000554482 PNPLA7Q6ZV29 1317 aa15.59■□□□□ 0.09
NPC2-205ENST00000554482 LY75O60449 1722 aa15.59■□□□□ 0.09
NPC2-205ENST00000554482 NSD2O96028 1365 aa15.59■□□□□ 0.09
NPC2-205ENST00000554482 TUBGCP6Q96RT7 1819 aa15.59■□□□□ 0.09
NPC2-205ENST00000554482 POLD1P28340 1107 aa15.58■□□□□ 0.08
NPC2-205ENST00000554482 CDCA8Q53HL2 280 aa15.58■□□□□ 0.08
NPC2-205ENST00000554482 CCNL1Q9UK58 526 aaPredicted RBP15.58■□□□□ 0.08
NPC2-205ENST00000554482 TATP17735 454 aaPredicted RBP15.57■□□□□ 0.08
NPC2-205ENST00000554482 SLC16A10Q8TF71 515 aa15.57■□□□□ 0.08
NPC2-205ENST00000554482 FLT4P35916 1363 aa15.57■□□□□ 0.08
NPC2-205ENST00000554482 HSP90AB2PQ58FF8 381 aa15.56■□□□□ 0.08
NPC2-205ENST00000554482 CGNL1Q0VF96 1302 aa15.56■□□□□ 0.08
NPC2-205ENST00000554482 MAP3K5Q99683 1374 aa15.56■□□□□ 0.08
NPC2-205ENST00000554482 NSD3Q9BZ95 1437 aa15.55■□□□□ 0.08
NPC2-205ENST00000554482 INSRP06213 1382 aa15.55■□□□□ 0.08
NPC2-205ENST00000554482 PCDH11XQ9BZA7 1347 aa15.55■□□□□ 0.08
NPC2-205ENST00000554482 PCDH11YQ9BZA8 1340 aa15.55■□□□□ 0.08
NPC2-205ENST00000554482 GPR162Q16538 588 aa15.55■□□□□ 0.08
NPC2-205ENST00000554482 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
NPC2-205ENST00000554482 ZNF784Q8NCA9 323 aaPredicted RBP15.54■□□□□ 0.08
NPC2-205ENST00000554482 CHD4Q14839 1912 aa15.53■□□□□ 0.08
NPC2-205ENST00000554482 PPM1GO15355 546 aaPredicted RBP15.53■□□□□ 0.08
NPC2-205ENST00000554482 KIF24Q5T7B8 1368 aa15.52■□□□□ 0.08
NPC2-205ENST00000554482 C5P01031 1676 aa15.52■□□□□ 0.08
NPC2-205ENST00000554482 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.08
NPC2-205ENST00000554482 MPRIPQ6WCQ1 1025 aa15.51■□□□□ 0.07
NPC2-205ENST00000554482 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
NPC2-205ENST00000554482 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
NPC2-205ENST00000554482 COL24A1Q17RW2 1714 aa15.51■□□□□ 0.07
NPC2-205ENST00000554482 PALLDQ8WX93 1383 aa15.5■□□□□ 0.07
NPC2-205ENST00000554482 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
NPC2-205ENST00000554482 CARD14Q9BXL6 1004 aa15.5■□□□□ 0.07
NPC2-205ENST00000554482 TOGARAM1Q9Y4F4 1720 aa15.49■□□□□ 0.07
NPC2-205ENST00000554482 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
NPC2-205ENST00000554482 COL23A1Q86Y22 540 aaPredicted RBP15.49■□□□□ 0.07
NPC2-205ENST00000554482 NLGN2Q8NFZ4 835 aa15.49■□□□□ 0.07
NPC2-205ENST00000554482 PKD1L3Q7Z443 1732 aa15.48■□□□□ 0.07
NPC2-205ENST00000554482 CYP27B1O15528 508 aa15.48■□□□□ 0.07
NPC2-205ENST00000554482 ANKRD26Q9UPS8 1709 aa15.48■□□□□ 0.07
NPC2-205ENST00000554482 UTRNP46939 3433 aa15.48■□□□□ 0.07
NPC2-205ENST00000554482 ITGB4P16144 1822 aa15.47■□□□□ 0.07
NPC2-205ENST00000554482 TAF1LQ8IZX4 1826 aa15.46■□□□□ 0.07
NPC2-205ENST00000554482 SMARCC1Q92922 1105 aaPredicted RBP15.45■□□□□ 0.06
NPC2-205ENST00000554482 AK7Q96M32 723 aa15.45■□□□□ 0.06
NPC2-205ENST00000554482 PCGF6Q9BYE7 350 aa15.45■□□□□ 0.06
NPC2-205ENST00000554482 SPG7Q9UQ90 795 aa15.45■□□□□ 0.06
NPC2-205ENST00000554482 C4BP0C0L5 1744 aa15.45■□□□□ 0.06
NPC2-205ENST00000554482 HMGB2P26583 209 aaKnown RBP15.44■□□□□ 0.06
NPC2-205ENST00000554482 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
NPC2-205ENST00000554482 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
NPC2-205ENST00000554482 NCAPD2Q15021 1401 aa15.43■□□□□ 0.06
NPC2-205ENST00000554482 PHF14O94880 888 aa15.43■□□□□ 0.06
NPC2-205ENST00000554482 FLAD1Q8NFF5 587 aa15.43■□□□□ 0.06
NPC2-205ENST00000554482 TIMELESSQ9UNS1 1208 aa15.43■□□□□ 0.06
NPC2-205ENST00000554482 WASHC2AQ641Q2 1341 aa15.43■□□□□ 0.06
NPC2-205ENST00000554482 EYA1Q99502 592 aa15.42■□□□□ 0.06
NPC2-205ENST00000554482 PIGBQ92521 554 aa15.41■□□□□ 0.06
NPC2-205ENST00000554482 TMOD3Q9NYL9 352 aa15.41■□□□□ 0.06
NPC2-205ENST00000554482 SENP3-EIF4A1A0A087X0R7 540 aa15.4■□□□□ 0.06
NPC2-205ENST00000554482 GRIN3BO60391 1043 aa15.4■□□□□ 0.06
NPC2-205ENST00000554482 YBX3P16989 372 aaKnown RBP eCLIP15.4■□□□□ 0.063e-8■■■□□ 18.3
NPC2-205ENST00000554482 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
NPC2-205ENST00000554482 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
NPC2-205ENST00000554482 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
NPC2-205ENST00000554482 SMIM5Q71RC9 77 aa15.39■□□□□ 0.05
NPC2-205ENST00000554482 IFNL2Q8IZJ0 200 aa15.39■□□□□ 0.05
NPC2-205ENST00000554482 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
NPC2-205ENST00000554482 CLSPNQ9HAW4 1339 aa15.39■□□□□ 0.05
NPC2-205ENST00000554482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.38■□□□□ 0.05
NPC2-205ENST00000554482 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
NPC2-205ENST00000554482 GIGYF1O75420 1035 aaPredicted RBP15.38■□□□□ 0.05
NPC2-205ENST00000554482 PHKG2P15735 406 aa15.38■□□□□ 0.05
NPC2-205ENST00000554482 SIK1P57059 783 aa15.38■□□□□ 0.05
NPC2-205ENST00000554482 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
NPC2-205ENST00000554482 AMIGO3Q86WK7 504 aa15.38■□□□□ 0.05
NPC2-205ENST00000554482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.05
NPC2-205ENST00000554482 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
NPC2-205ENST00000554482 ASAP1Q9ULH1 1129 aa15.37■□□□□ 0.05
NPC2-205ENST00000554482 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
NPC2-205ENST00000554482 GNPATO15228 680 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms