RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 NECTIN2Q92692 538 aa20.78■□□□□ 0.92
PPP4R3A-202ENST00000554390 RBM27Q9P2N5 1060 aaKnown RBP20.78■□□□□ 0.92
PPP4R3A-202ENST00000554390 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
PPP4R3A-202ENST00000554390 PRDM10Q9NQV6 1147 aa20.78■□□□□ 0.92
PPP4R3A-202ENST00000554390 F6X3S4 739 aa20.77■□□□□ 0.92
PPP4R3A-202ENST00000554390 NUCB2P80303 420 aa20.77■□□□□ 0.92
PPP4R3A-202ENST00000554390 CDC45O75419 566 aa20.76■□□□□ 0.91
PPP4R3A-202ENST00000554390 IL13P35225 146 aa20.76■□□□□ 0.91
PPP4R3A-202ENST00000554390 GNAI1P63096 354 aa20.76■□□□□ 0.91
PPP4R3A-202ENST00000554390 CFAP74Q9C0B2 1584 aa20.76■□□□□ 0.91
PPP4R3A-202ENST00000554390 MEIS3Q99687 375 aa20.76■□□□□ 0.91
PPP4R3A-202ENST00000554390 SASS6Q6UVJ0 657 aa20.76■□□□□ 0.91
PPP4R3A-202ENST00000554390 PRPF40AO75400 957 aaKnown RBP20.75■□□□□ 0.91
PPP4R3A-202ENST00000554390 MCM5P33992 734 aa20.75■□□□□ 0.91
PPP4R3A-202ENST00000554390 SULT6B1Q6IMI4 303 aa20.75■□□□□ 0.91
PPP4R3A-202ENST00000554390 CYP2E1P05181 493 aaPredicted RBP20.74■□□□□ 0.91
PPP4R3A-202ENST00000554390 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
PPP4R3A-202ENST00000554390 PNPLA6Q8IY17 1366 aa20.74■□□□□ 0.91
PPP4R3A-202ENST00000554390 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
PPP4R3A-202ENST00000554390 GPT2Q8TD30 523 aa20.73■□□□□ 0.91
PPP4R3A-202ENST00000554390 ZHX1Q9UKY1 873 aaPredicted RBP20.73■□□□□ 0.91
PPP4R3A-202ENST00000554390 ABCC4O15439 1325 aa20.73■□□□□ 0.91
PPP4R3A-202ENST00000554390 FOXO3O43524 673 aa20.73■□□□□ 0.91
PPP4R3A-202ENST00000554390 SDSP20132 328 aa20.73■□□□□ 0.91
PPP4R3A-202ENST00000554390 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
PPP4R3A-202ENST00000554390 MPNDQ8N594 471 aa20.73■□□□□ 0.91
PPP4R3A-202ENST00000554390 A0A0U1RQG5 324 aaPredicted RBP20.72■□□□□ 0.91
PPP4R3A-202ENST00000554390 CCDC39Q9UFE4 941 aa20.72■□□□□ 0.91
PPP4R3A-202ENST00000554390 DIP2CQ9Y2E4 1556 aa20.72■□□□□ 0.91
PPP4R3A-202ENST00000554390 RABEP1Q15276 862 aa20.71■□□□□ 0.91
PPP4R3A-202ENST00000554390 IFT57Q9NWB7 429 aa20.71■□□□□ 0.91
PPP4R3A-202ENST00000554390 CFAP44Q96MT7 982 aa20.71■□□□□ 0.91
PPP4R3A-202ENST00000554390 SYCE3A1L190 88 aa20.7■□□□□ 0.9
PPP4R3A-202ENST00000554390 TTC22Q5TAA0 569 aa20.7■□□□□ 0.9
PPP4R3A-202ENST00000554390 LRSAM1Q6UWE0 723 aa20.7■□□□□ 0.9
PPP4R3A-202ENST00000554390 NSFL1CQ9UNZ2 370 aaKnown RBP20.7■□□□□ 0.9
PPP4R3A-202ENST00000554390 G2E3Q7L622 706 aa20.7■□□□□ 0.9
PPP4R3A-202ENST00000554390 ZNF853P0CG23 659 aa20.69■□□□□ 0.9
PPP4R3A-202ENST00000554390 CCDC94Q9BW85 323 aaPredicted RBP20.69■□□□□ 0.9
PPP4R3A-202ENST00000554390 TMEM63CQ9P1W3 806 aa20.69■□□□□ 0.9
PPP4R3A-202ENST00000554390 EXOC6BQ9Y2D4 811 aa20.69■□□□□ 0.9
PPP4R3A-202ENST00000554390 COG3Q96JB2 828 aa20.69■□□□□ 0.9
PPP4R3A-202ENST00000554390 USP26Q9BXU7 913 aa20.68■□□□□ 0.9
PPP4R3A-202ENST00000554390 MAP2P11137 1827 aaKnown RBP20.68■□□□□ 0.9
PPP4R3A-202ENST00000554390 ANKRD26Q9UPS8 1709 aa20.68■□□□□ 0.9
PPP4R3A-202ENST00000554390 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
PPP4R3A-202ENST00000554390 RNF214Q8ND24 703 aa20.67■□□□□ 0.9
PPP4R3A-202ENST00000554390 MSH6P52701 1360 aa20.67■□□□□ 0.9
PPP4R3A-202ENST00000554390 MED14O60244 1454 aa20.67■□□□□ 0.9
PPP4R3A-202ENST00000554390 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
PPP4R3A-202ENST00000554390 DCTPP1Q9H773 170 aa20.67■□□□□ 0.9
PPP4R3A-202ENST00000554390 API5Q9BZZ5 524 aaKnown RBP20.67■□□□□ 0.9
PPP4R3A-202ENST00000554390 ZFYVE9O95405 1425 aa20.66■□□□□ 0.9
PPP4R3A-202ENST00000554390 CEP85Q6P2H3 762 aa20.66■□□□□ 0.9
PPP4R3A-202ENST00000554390 NUDT16Q96DE0 195 aaKnown RBP20.66■□□□□ 0.9
PPP4R3A-202ENST00000554390 DMTNQ08495 405 aa20.65■□□□□ 0.9
PPP4R3A-202ENST00000554390 CWC22Q9HCG8 908 aaKnown RBP20.65■□□□□ 0.9
PPP4R3A-202ENST00000554390 ARHGAP45Q92619 1136 aa20.65■□□□□ 0.9
PPP4R3A-202ENST00000554390 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
PPP4R3A-202ENST00000554390 ZDHHC9Q9Y397 364 aa20.65■□□□□ 0.9
PPP4R3A-202ENST00000554390 ARHGEF40Q8TER5 1519 aa20.65■□□□□ 0.9
PPP4R3A-202ENST00000554390 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
PPP4R3A-202ENST00000554390 TMEM131LA2VDJ0 1609 aa20.64■□□□□ 0.9
PPP4R3A-202ENST00000554390 RIMS2Q9UQ26 1411 aa20.64■□□□□ 0.89
PPP4R3A-202ENST00000554390 KIF20BQ96Q89 1820 aa20.64■□□□□ 0.89
PPP4R3A-202ENST00000554390 PTMAP06454 111 aaKnown RBP20.64■□□□□ 0.89
PPP4R3A-202ENST00000554390 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.89
PPP4R3A-202ENST00000554390 ZSCAN20P17040 1043 aaPredicted RBP20.64■□□□□ 0.89
PPP4R3A-202ENST00000554390 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
PPP4R3A-202ENST00000554390 ALKQ9UM73 1620 aa20.63■□□□□ 0.89
PPP4R3A-202ENST00000554390 EIF4A2Q14240 407 aaKnown RBP20.63■□□□□ 0.89
PPP4R3A-202ENST00000554390 UTP14CQ5TAP6 766 aaKnown RBP20.63■□□□□ 0.89
PPP4R3A-202ENST00000554390 WASLO00401 505 aaPredicted RBP20.63■□□□□ 0.89
PPP4R3A-202ENST00000554390 DNTTIP2Q5QJE6 756 aaKnown RBP20.63■□□□□ 0.89
PPP4R3A-202ENST00000554390 ZNF428Q96B54 188 aa20.63■□□□□ 0.89
PPP4R3A-202ENST00000554390 KIAA2012Q0VF49 1180 aa20.62■□□□□ 0.89
PPP4R3A-202ENST00000554390 MYRIPQ8NFW9 859 aa20.62■□□□□ 0.89
PPP4R3A-202ENST00000554390 KNDC1Q76NI1 1749 aa20.62■□□□□ 0.89
PPP4R3A-202ENST00000554390 PREX1Q8TCU6 1659 aa20.62■□□□□ 0.89
PPP4R3A-202ENST00000554390 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
PPP4R3A-202ENST00000554390 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
PPP4R3A-202ENST00000554390 MAP4K4O95819 1239 aaPredicted RBP20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 NEK4P51957 841 aa20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 TSC1Q92574 1164 aa20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 INTS3Q68E01 1043 aaKnown RBP20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 RILPL2Q969X0 211 aa20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 UPF3BQ9BZI7 483 aaKnown RBP20.61■□□□□ 0.89
PPP4R3A-202ENST00000554390 BRPF1P55201 1214 aaPredicted RBP20.6■□□□□ 0.89
PPP4R3A-202ENST00000554390 PALD1Q9ULE6 856 aa20.6■□□□□ 0.89
PPP4R3A-202ENST00000554390 METP08581 1390 aa20.6■□□□□ 0.89
PPP4R3A-202ENST00000554390 CLTCQ00610 1675 aaKnown RBP20.59■□□□□ 0.89
PPP4R3A-202ENST00000554390 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
PPP4R3A-202ENST00000554390 CPS1P31327 1500 aa20.59■□□□□ 0.89
PPP4R3A-202ENST00000554390 NEO1Q92859 1461 aa20.59■□□□□ 0.89
PPP4R3A-202ENST00000554390 PIK3R4Q99570 1358 aa20.59■□□□□ 0.89
PPP4R3A-202ENST00000554390 CHMP4BQ9H444 224 aaKnown RBP20.58■□□□□ 0.89
PPP4R3A-202ENST00000554390 ST18O60284 1047 aa20.58■□□□□ 0.89
PPP4R3A-202ENST00000554390 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms