RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 ZCRB1Q8TBF4 217 aaKnown RBP28.55■■■□□ 2.16
NEMP1-204ENST00000554340 LRRC4BQ9NT99 713 aa28.55■■■□□ 2.16
NEMP1-204ENST00000554340 ZNF827Q17R98 1081 aa28.53■■■□□ 2.16
NEMP1-204ENST00000554340 NBPF6Q5VWK0 638 aa28.53■■■□□ 2.16
NEMP1-204ENST00000554340 NBPF4Q96M43 638 aa28.53■■■□□ 2.16
NEMP1-204ENST00000554340 SLC27A3Q5K4L6 730 aa28.52■■■□□ 2.16
NEMP1-204ENST00000554340 KIF24Q5T7B8 1368 aa28.52■■■□□ 2.16
NEMP1-204ENST00000554340 SGIP1Q9BQI5 828 aa28.51■■■□□ 2.16
NEMP1-204ENST00000554340 INSRP06213 1382 aa28.51■■■□□ 2.15
NEMP1-204ENST00000554340 CGNL1Q0VF96 1302 aa28.51■■■□□ 2.15
NEMP1-204ENST00000554340 YY1P25490 414 aa28.5■■■□□ 2.15
NEMP1-204ENST00000554340 PRIM1P49642 420 aaKnown RBP28.5■■■□□ 2.15
NEMP1-204ENST00000554340 SYTL4Q96C24 671 aaPredicted RBP28.5■■■□□ 2.15
NEMP1-204ENST00000554340 TUBGCP6Q96RT7 1819 aa28.5■■■□□ 2.15
NEMP1-204ENST00000554340 NSD2O96028 1365 aa28.5■■■□□ 2.15
NEMP1-204ENST00000554340 FLT4P35916 1363 aa28.5■■■□□ 2.15
NEMP1-204ENST00000554340 NSD3Q9BZ95 1437 aa28.48■■■□□ 2.15
NEMP1-204ENST00000554340 USHBP1Q8N6Y0 703 aa28.48■■■□□ 2.15
NEMP1-204ENST00000554340 AKT1S1Q96B36 256 aa28.48■■■□□ 2.15
NEMP1-204ENST00000554340 CARD14Q9BXL6 1004 aa28.48■■■□□ 2.15
NEMP1-204ENST00000554340 ANKRD26Q9UPS8 1709 aa28.47■■■□□ 2.15
NEMP1-204ENST00000554340 HSP90AB2PQ58FF8 381 aa28.47■■■□□ 2.15
NEMP1-204ENST00000554340 RAPGEF4Q8WZA2 1011 aa28.47■■■□□ 2.15
NEMP1-204ENST00000554340 FHDC1Q9C0D6 1143 aaPredicted RBP28.46■■■□□ 2.15
NEMP1-204ENST00000554340 COL24A1Q17RW2 1714 aa28.46■■■□□ 2.15
NEMP1-204ENST00000554340 SYT17Q9BSW7 474 aa28.45■■■□□ 2.14
NEMP1-204ENST00000554340 TATP17735 454 aaPredicted RBP28.43■■■□□ 2.14
NEMP1-204ENST00000554340 ARXQ96QS3 562 aa28.42■■■□□ 2.14
NEMP1-204ENST00000554340 MAP2P11137 1827 aaKnown RBP28.41■■■□□ 2.14
NEMP1-204ENST00000554340 SLC16A10Q8TF71 515 aa28.41■■■□□ 2.14
NEMP1-204ENST00000554340 PKD1L3Q7Z443 1732 aa28.41■■■□□ 2.14
NEMP1-204ENST00000554340 KCNQ4P56696 695 aa28.4■■■□□ 2.14
NEMP1-204ENST00000554340 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
NEMP1-204ENST00000554340 PNPLA7Q6ZV29 1317 aa28.4■■■□□ 2.14
NEMP1-204ENST00000554340 PCDH11XQ9BZA7 1347 aa28.4■■■□□ 2.14
NEMP1-204ENST00000554340 PCDH11YQ9BZA8 1340 aa28.4■■■□□ 2.14
NEMP1-204ENST00000554340 MAP3K5Q99683 1374 aa28.4■■■□□ 2.14
NEMP1-204ENST00000554340 EMILIN1Q9Y6C2 1016 aa28.39■■■□□ 2.14
NEMP1-204ENST00000554340 UTRNP46939 3433 aa28.39■■■□□ 2.14
NEMP1-204ENST00000554340 TFCP2L1Q9NZI6 479 aa28.37■■■□□ 2.13
NEMP1-204ENST00000554340 CCNL1Q9UK58 526 aaPredicted RBP28.37■■■□□ 2.13
NEMP1-204ENST00000554340 ITGB4P16144 1822 aa28.37■■■□□ 2.13
NEMP1-204ENST00000554340 TOGARAM1Q9Y4F4 1720 aa28.37■■■□□ 2.13
NEMP1-204ENST00000554340 C5P01031 1676 aa28.37■■■□□ 2.13
NEMP1-204ENST00000554340 NCAPD2Q15021 1401 aa28.37■■■□□ 2.13
NEMP1-204ENST00000554340 CHD4Q14839 1912 aa28.36■■■□□ 2.13
NEMP1-204ENST00000554340 TAF1LQ8IZX4 1826 aa28.34■■■□□ 2.13
NEMP1-204ENST00000554340 POLD1P28340 1107 aa28.32■■■□□ 2.12
NEMP1-204ENST00000554340 WASHC2AQ641Q2 1341 aa28.31■■■□□ 2.12
NEMP1-204ENST00000554340 PPM1GO15355 546 aaPredicted RBP28.31■■■□□ 2.12
NEMP1-204ENST00000554340 CYP27B1O15528 508 aa28.31■■■□□ 2.12
NEMP1-204ENST00000554340 EIF4G2P78344 907 aaKnown RBP eCLIP28.27■■■□□ 2.12
NEMP1-204ENST00000554340 MPRIPQ6WCQ1 1025 aa28.27■■■□□ 2.12
NEMP1-204ENST00000554340 POLR3GLQ9BT43 218 aa28.27■■■□□ 2.12
NEMP1-204ENST00000554340 PALLDQ8WX93 1383 aa28.27■■■□□ 2.12
NEMP1-204ENST00000554340 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
NEMP1-204ENST00000554340 HMGB2P26583 209 aaKnown RBP28.24■■■□□ 2.11
NEMP1-204ENST00000554340 EYA1Q99502 592 aa28.24■■■□□ 2.11
NEMP1-204ENST00000554340 SPG7Q9UQ90 795 aa28.24■■■□□ 2.11
NEMP1-204ENST00000554340 COL23A1Q86Y22 540 aaPredicted RBP28.24■■■□□ 2.11
NEMP1-204ENST00000554340 C4BP0C0L5 1744 aa28.23■■■□□ 2.11
NEMP1-204ENST00000554340 NKX1-1Q15270 411 aaPredicted RBP28.23■■■□□ 2.11
NEMP1-204ENST00000554340 KLHL34Q8N239 644 aa28.23■■■□□ 2.11
NEMP1-204ENST00000554340 MSH5O43196 834 aa28.22■■■□□ 2.11
NEMP1-204ENST00000554340 SMARCC1Q92922 1105 aaPredicted RBP28.22■■■□□ 2.11
NEMP1-204ENST00000554340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.22■■■□□ 2.11
NEMP1-204ENST00000554340 HSPA5P11021 654 aaKnown RBP28.2■■■□□ 2.1
NEMP1-204ENST00000554340 GOLGB1Q14789 3259 aaKnown RBP28.19■■■□□ 2.1
NEMP1-204ENST00000554340 UBR3Q6ZT12 1888 aa28.19■■■□□ 2.1
NEMP1-204ENST00000554340 PIGBQ92521 554 aa28.18■■■□□ 2.1
NEMP1-204ENST00000554340 PLEKHG2Q9H7P9 1386 aa28.18■■■□□ 2.1
NEMP1-204ENST00000554340 TNNT2P45379 298 aaPredicted RBP28.17■■■□□ 2.1
NEMP1-204ENST00000554340 EIF4A2Q14240 407 aaKnown RBP28.17■■■□□ 2.1
NEMP1-204ENST00000554340 GPR162Q16538 588 aa28.17■■■□□ 2.1
NEMP1-204ENST00000554340 ZNF784Q8NCA9 323 aaPredicted RBP28.17■■■□□ 2.1
NEMP1-204ENST00000554340 FLAD1Q8NFF5 587 aa28.17■■■□□ 2.1
NEMP1-204ENST00000554340 PANK3Q9H999 370 aa28.15■■■□□ 2.1
NEMP1-204ENST00000554340 NLGN2Q8NFZ4 835 aa28.14■■■□□ 2.1
NEMP1-204ENST00000554340 PHKG2P15735 406 aa28.13■■■□□ 2.09
NEMP1-204ENST00000554340 MSL1Q68DK7 614 aa28.13■■■□□ 2.09
NEMP1-204ENST00000554340 IFNL2Q8IZJ0 200 aa28.13■■■□□ 2.09
NEMP1-204ENST00000554340 TMOD3Q9NYL9 352 aa28.12■■■□□ 2.09
NEMP1-204ENST00000554340 IGSF1Q8N6C5 1336 aa28.12■■■□□ 2.09
NEMP1-204ENST00000554340 AK7Q96M32 723 aa28.11■■■□□ 2.09
NEMP1-204ENST00000554340 LOC102724428A0A0B4J2F2 783 aa28.1■■■□□ 2.09
NEMP1-204ENST00000554340 SIK1P57059 783 aa28.1■■■□□ 2.09
NEMP1-204ENST00000554340 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
NEMP1-204ENST00000554340 AMIGO3Q86WK7 504 aa28.07■■■□□ 2.08
NEMP1-204ENST00000554340 ASAP1Q9ULH1 1129 aa28.07■■■□□ 2.08
NEMP1-204ENST00000554340 LINC00116Q8NCU8 138 aa28.05■■■□□ 2.08
NEMP1-204ENST00000554340 ZNF831Q5JPB2 1677 aa28.04■■■□□ 2.08
NEMP1-204ENST00000554340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.04■■■□□ 2.08
NEMP1-204ENST00000554340 CD2APQ9Y5K6 639 aa28.04■■■□□ 2.08
NEMP1-204ENST00000554340 PHF14O94880 888 aa28.03■■■□□ 2.08
NEMP1-204ENST00000554340 SSFA2P28290 1259 aa28.03■■■□□ 2.08
NEMP1-204ENST00000554340 MORC1Q86VD1 984 aa28.03■■■□□ 2.08
NEMP1-204ENST00000554340 ITPK1Q13572 414 aa28.02■■■□□ 2.08
NEMP1-204ENST00000554340 ATG3Q9NT62 314 aa28.02■■■□□ 2.08
NEMP1-204ENST00000554340 GRIN3BO60391 1043 aa28.01■■■□□ 2.07
NEMP1-204ENST00000554340 YBX3P16989 372 aaKnown RBP eCLIP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms