RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 ANP32CO43423 234 aa23.23■■□□□ 1.31
TUBB3-205ENST00000554336 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
TUBB3-205ENST00000554336 PTF1AQ7RTS3 328 aa23.23■■□□□ 1.31
TUBB3-205ENST00000554336 CSB-PGBD3P0DP91 1061 aa23.21■■□□□ 1.31
TUBB3-205ENST00000554336 MARCH10Q8NA82 808 aaPredicted RBP23.21■■□□□ 1.31
TUBB3-205ENST00000554336 CARD10Q9BWT7 1032 aa23.21■■□□□ 1.31
TUBB3-205ENST00000554336 IL13P35225 146 aa23.2■■□□□ 1.3
TUBB3-205ENST00000554336 NBPF6Q5VWK0 638 aa23.2■■□□□ 1.3
TUBB3-205ENST00000554336 NBPF4Q96M43 638 aa23.2■■□□□ 1.3
TUBB3-205ENST00000554336 CCDC184Q52MB2 194 aa23.19■■□□□ 1.3
TUBB3-205ENST00000554336 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
TUBB3-205ENST00000554336 USHBP1Q8N6Y0 703 aa23.18■■□□□ 1.3
TUBB3-205ENST00000554336 NLRP2Q9NX02 1062 aa23.18■■□□□ 1.3
TUBB3-205ENST00000554336 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
TUBB3-205ENST00000554336 EYA1Q99502 592 aa23.17■■□□□ 1.3
TUBB3-205ENST00000554336 CDCA7Q9BWT1 371 aaPredicted RBP23.17■■□□□ 1.3
TUBB3-205ENST00000554336 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
TUBB3-205ENST00000554336 MEGF6O75095 1541 aa23.16■■□□□ 1.3
TUBB3-205ENST00000554336 SHANK3Q9BYB0 1731 aa23.16■■□□□ 1.3
TUBB3-205ENST00000554336 PLSCR1O15162 318 aa23.15■■□□□ 1.3
TUBB3-205ENST00000554336 BCL11BQ9C0K0 894 aaPredicted RBP23.15■■□□□ 1.3
TUBB3-205ENST00000554336 BCL9O00512 1426 aa23.15■■□□□ 1.3
TUBB3-205ENST00000554336 CFAP53Q96M91 514 aa23.14■■□□□ 1.29
TUBB3-205ENST00000554336 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
TUBB3-205ENST00000554336 TNS2Q63HR2 1409 aa23.13■■□□□ 1.29
TUBB3-205ENST00000554336 KDRP35968 1356 aa23.13■■□□□ 1.29
TUBB3-205ENST00000554336 PKD1L3Q7Z443 1732 aa23.12■■□□□ 1.29
TUBB3-205ENST00000554336 AEBP1Q8IUX7 1158 aa23.12■■□□□ 1.29
TUBB3-205ENST00000554336 CASZ1Q86V15 1759 aa23.12■■□□□ 1.29
TUBB3-205ENST00000554336 EXOC5O00471 708 aa23.11■■□□□ 1.29
TUBB3-205ENST00000554336 PROM2Q8N271 834 aa23.11■■□□□ 1.29
TUBB3-205ENST00000554336 NHSQ6T4R5 1651 aa23.09■■□□□ 1.29
TUBB3-205ENST00000554336 U2SURPO15042 1029 aaKnown RBP23.07■■□□□ 1.28
TUBB3-205ENST00000554336 KCNQ2O43526 872 aa23.07■■□□□ 1.28
TUBB3-205ENST00000554336 MIER1Q8N108 512 aa23.07■■□□□ 1.28
TUBB3-205ENST00000554336 PDGFDQ9GZP0 370 aaPredicted RBP23.07■■□□□ 1.28
TUBB3-205ENST00000554336 HMOX1P09601 288 aa23.06■■□□□ 1.28
TUBB3-205ENST00000554336 SULT6B1Q6IMI4 303 aa23.06■■□□□ 1.28
TUBB3-205ENST00000554336 SPON1Q9HCB6 807 aa23.06■■□□□ 1.28
TUBB3-205ENST00000554336 IL2RBP14784 551 aa23.04■■□□□ 1.28
TUBB3-205ENST00000554336 ACSBG1Q96GR2 724 aa23.04■■□□□ 1.28
TUBB3-205ENST00000554336 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
TUBB3-205ENST00000554336 BTAF1O14981 1849 aa23.03■■□□□ 1.28
TUBB3-205ENST00000554336 TXNRD1Q16881 649 aa23.03■■□□□ 1.28
TUBB3-205ENST00000554336 U2AF1L5P0DN76 240 aaPredicted RBP23.02■■□□□ 1.28
TUBB3-205ENST00000554336 U2AF1Q01081 240 aaKnown RBP eCLIP23.02■■□□□ 1.28
TUBB3-205ENST00000554336 RSPH6AQ9H0K4 717 aa23.02■■□□□ 1.28
TUBB3-205ENST00000554336 PPP1R1BQ9UD71 204 aaPredicted RBP23.02■■□□□ 1.28
TUBB3-205ENST00000554336 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
TUBB3-205ENST00000554336 KAT6BQ8WYB5 2073 aa23.01■■□□□ 1.27
TUBB3-205ENST00000554336 RAPGEF4Q8WZA2 1011 aa23■■□□□ 1.27
TUBB3-205ENST00000554336 ZBTB7AO95365 584 aa22.98■■□□□ 1.27
TUBB3-205ENST00000554336 PNISRQ8TF01 805 aaKnown RBP22.98■■□□□ 1.27
TUBB3-205ENST00000554336 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
TUBB3-205ENST00000554336 PAPPAQ13219 1627 aa22.97■■□□□ 1.27
TUBB3-205ENST00000554336 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
TUBB3-205ENST00000554336 TATP17735 454 aaPredicted RBP22.97■■□□□ 1.27
TUBB3-205ENST00000554336 PRKAR2BP31323 418 aa22.96■■□□□ 1.27
TUBB3-205ENST00000554336 SLC15A2Q16348 729 aa22.96■■□□□ 1.27
TUBB3-205ENST00000554336 STK32BQ9NY57 414 aa22.96■■□□□ 1.27
TUBB3-205ENST00000554336 ADAMTS8Q9UP79 889 aa22.96■■□□□ 1.27
TUBB3-205ENST00000554336 TOGARAM1Q9Y4F4 1720 aa22.96■■□□□ 1.27
TUBB3-205ENST00000554336 VIRMAQ69YN4 1812 aaKnown RBP22.95■■□□□ 1.26
TUBB3-205ENST00000554336 DLG5Q8TDM6 1919 aa22.94■■□□□ 1.26
TUBB3-205ENST00000554336 FCHSD2O94868 740 aa22.94■■□□□ 1.26
TUBB3-205ENST00000554336 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
TUBB3-205ENST00000554336 PHACTR3Q96KR7 559 aa22.94■■□□□ 1.26
TUBB3-205ENST00000554336 PLEKHF1Q96S99 279 aa22.94■■□□□ 1.26
TUBB3-205ENST00000554336 DOT1LQ8TEK3 1739 aa22.93■■□□□ 1.26
TUBB3-205ENST00000554336 CYP27B1O15528 508 aa22.92■■□□□ 1.26
TUBB3-205ENST00000554336 PTGER2P43116 358 aa22.92■■□□□ 1.26
TUBB3-205ENST00000554336 ZCRB1Q8TBF4 217 aaKnown RBP22.92■■□□□ 1.26
TUBB3-205ENST00000554336 DDX54Q8TDD1 881 aaKnown RBP22.92■■□□□ 1.26
TUBB3-205ENST00000554336 ATF5Q9Y2D1 282 aaPredicted RBP22.92■■□□□ 1.26
TUBB3-205ENST00000554336 ADAMTS7Q9UKP4 1686 aa22.91■■□□□ 1.26
TUBB3-205ENST00000554336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.91■■□□□ 1.26
TUBB3-205ENST00000554336 PCDH11XQ9BZA7 1347 aa22.89■■□□□ 1.26
TUBB3-205ENST00000554336 PCDH11YQ9BZA8 1340 aa22.89■■□□□ 1.26
TUBB3-205ENST00000554336 MTHFSDQ2M296 383 aaKnown RBP22.89■■□□□ 1.25
TUBB3-205ENST00000554336 CCDC146Q8IYE0 955 aa22.89■■□□□ 1.25
TUBB3-205ENST00000554336 LRRC4BQ9NT99 713 aa22.89■■□□□ 1.25
TUBB3-205ENST00000554336 SCN11AQ9UI33 1791 aa22.88■■□□□ 1.25
TUBB3-205ENST00000554336 ZNF827Q17R98 1081 aa22.87■■□□□ 1.25
TUBB3-205ENST00000554336 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
TUBB3-205ENST00000554336 SPG7Q9UQ90 795 aa22.87■■□□□ 1.25
TUBB3-205ENST00000554336 KDM6AO15550 1401 aaPredicted RBP22.86■■□□□ 1.25
TUBB3-205ENST00000554336 PHKG2P15735 406 aa22.86■■□□□ 1.25
TUBB3-205ENST00000554336 YY1P25490 414 aa22.86■■□□□ 1.25
TUBB3-205ENST00000554336 AMOTQ4VCS5 1084 aa22.86■■□□□ 1.25
TUBB3-205ENST00000554336 ZNF530Q6P9A1 599 aaPredicted RBP22.86■■□□□ 1.25
TUBB3-205ENST00000554336 ITGB4P16144 1822 aa22.85■■□□□ 1.25
TUBB3-205ENST00000554336 TUBGCP6Q96RT7 1819 aa22.85■■□□□ 1.25
TUBB3-205ENST00000554336 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
TUBB3-205ENST00000554336 MTFR1LQ9H019 292 aa22.85■■□□□ 1.25
TUBB3-205ENST00000554336 SGIP1Q9BQI5 828 aa22.84■■□□□ 1.25
TUBB3-205ENST00000554336 LY75O60449 1722 aa22.84■■□□□ 1.25
TUBB3-205ENST00000554336 SYTL4Q96C24 671 aaPredicted RBP22.83■■□□□ 1.25
TUBB3-205ENST00000554336 QSER1Q2KHR3 1735 aa22.82■■□□□ 1.24
TUBB3-205ENST00000554336 PRIM1P49642 420 aaKnown RBP22.82■■□□□ 1.24
TUBB3-205ENST00000554336 KCNQ4P56696 695 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms