RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 NHSQ6T4R5 1651 aa15.9■□□□□ 0.14
TMEM253-203ENST00000554329 MORC1Q86VD1 984 aa15.9■□□□□ 0.14
TMEM253-203ENST00000554329 KNSTRNQ9Y448 316 aa15.9■□□□□ 0.14
TMEM253-203ENST00000554329 BTAF1O14981 1849 aa15.89■□□□□ 0.13
TMEM253-203ENST00000554329 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
TMEM253-203ENST00000554329 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
TMEM253-203ENST00000554329 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
TMEM253-203ENST00000554329 EYA1Q99502 592 aa15.87■□□□□ 0.13
TMEM253-203ENST00000554329 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
TMEM253-203ENST00000554329 PROM2Q8N271 834 aa15.86■□□□□ 0.13
TMEM253-203ENST00000554329 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
TMEM253-203ENST00000554329 RAPGEF4Q8WZA2 1011 aa15.86■□□□□ 0.13
TMEM253-203ENST00000554329 ANO8Q9HCE9 1232 aaPredicted RBP15.86■□□□□ 0.13
TMEM253-203ENST00000554329 TATP17735 454 aaPredicted RBP15.85■□□□□ 0.13
TMEM253-203ENST00000554329 KCNQ4P56696 695 aa15.85■□□□□ 0.13
TMEM253-203ENST00000554329 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
TMEM253-203ENST00000554329 PER1O15534 1290 aaPredicted RBP15.84■□□□□ 0.13
TMEM253-203ENST00000554329 NSD2O96028 1365 aa15.84■□□□□ 0.13
TMEM253-203ENST00000554329 PRIM1P49642 420 aaKnown RBP15.83■□□□□ 0.12
TMEM253-203ENST00000554329 AEBP1Q8IUX7 1158 aa15.83■□□□□ 0.12
TMEM253-203ENST00000554329 PDGFDQ9GZP0 370 aaPredicted RBP15.83■□□□□ 0.12
TMEM253-203ENST00000554329 KIF24Q5T7B8 1368 aa15.83■□□□□ 0.12
TMEM253-203ENST00000554329 BCL9O00512 1426 aa15.83■□□□□ 0.12
TMEM253-203ENST00000554329 PKD1L3Q7Z443 1732 aa15.82■□□□□ 0.12
TMEM253-203ENST00000554329 CYP27B1O15528 508 aa15.82■□□□□ 0.12
TMEM253-203ENST00000554329 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
TMEM253-203ENST00000554329 RGPD3A6NKT7 1758 aaPredicted RBP15.82■□□□□ 0.12
TMEM253-203ENST00000554329 RGPD4Q7Z3J3 1758 aa15.82■□□□□ 0.12
TMEM253-203ENST00000554329 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
TMEM253-203ENST00000554329 NCAPD2Q15021 1401 aa15.8■□□□□ 0.12
TMEM253-203ENST00000554329 PARD3Q8TEW0 1356 aa15.79■□□□□ 0.12
TMEM253-203ENST00000554329 PLSCR1O15162 318 aa15.79■□□□□ 0.12
TMEM253-203ENST00000554329 ITGB4P16144 1822 aa15.78■□□□□ 0.12
TMEM253-203ENST00000554329 MTHFSP49914 203 aa15.78■□□□□ 0.12
TMEM253-203ENST00000554329 LRRC4BQ9NT99 713 aa15.78■□□□□ 0.12
TMEM253-203ENST00000554329 IGSF1Q8N6C5 1336 aa15.77■□□□□ 0.12
TMEM253-203ENST00000554329 PCDH11XQ9BZA7 1347 aa15.77■□□□□ 0.12
TMEM253-203ENST00000554329 PCDH11YQ9BZA8 1340 aa15.77■□□□□ 0.12
TMEM253-203ENST00000554329 HMOX1P09601 288 aa15.76■□□□□ 0.11
TMEM253-203ENST00000554329 NBPF14Q5TI25 921 aa15.76■□□□□ 0.11
TMEM253-203ENST00000554329 MPRIPQ6WCQ1 1025 aa15.76■□□□□ 0.11
TMEM253-203ENST00000554329 IL13P35225 146 aa15.75■□□□□ 0.11
TMEM253-203ENST00000554329 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
TMEM253-203ENST00000554329 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
TMEM253-203ENST00000554329 PAPPAQ13219 1627 aa15.75■□□□□ 0.11
TMEM253-203ENST00000554329 TUBGCP6Q96RT7 1819 aa15.74■□□□□ 0.11
TMEM253-203ENST00000554329 CASZ1Q86V15 1759 aa15.74■□□□□ 0.11
TMEM253-203ENST00000554329 LY75O60449 1722 aa15.74■□□□□ 0.11
TMEM253-203ENST00000554329 LRP5O75197 1615 aa15.73■□□□□ 0.11
TMEM253-203ENST00000554329 ZBTB7AO95365 584 aa15.73■□□□□ 0.11
TMEM253-203ENST00000554329 PHKG2P15735 406 aa15.72■□□□□ 0.11
TMEM253-203ENST00000554329 SPG7Q9UQ90 795 aa15.72■□□□□ 0.11
TMEM253-203ENST00000554329 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.11
TMEM253-203ENST00000554329 SMIM5Q71RC9 77 aa15.71■□□□□ 0.11
TMEM253-203ENST00000554329 STK32BQ9NY57 414 aa15.71■□□□□ 0.11
TMEM253-203ENST00000554329 SLC15A2Q16348 729 aa15.7■□□□□ 0.1
TMEM253-203ENST00000554329 ZNF530Q6P9A1 599 aaPredicted RBP15.7■□□□□ 0.1
TMEM253-203ENST00000554329 PIGBQ92521 554 aa15.7■□□□□ 0.1
TMEM253-203ENST00000554329 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
TMEM253-203ENST00000554329 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
TMEM253-203ENST00000554329 CCNL1Q9UK58 526 aaPredicted RBP15.69■□□□□ 0.1
TMEM253-203ENST00000554329 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
TMEM253-203ENST00000554329 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
TMEM253-203ENST00000554329 DIAPH1O60610 1272 aaKnown RBP15.68■□□□□ 0.1
TMEM253-203ENST00000554329 IFNL2Q8IZJ0 200 aa15.68■□□□□ 0.1
TMEM253-203ENST00000554329 C5P01031 1676 aa15.67■□□□□ 0.1
TMEM253-203ENST00000554329 DDX10Q13206 875 aaKnown RBP15.67■□□□□ 0.1
TMEM253-203ENST00000554329 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
TMEM253-203ENST00000554329 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
TMEM253-203ENST00000554329 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
TMEM253-203ENST00000554329 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
TMEM253-203ENST00000554329 NKX1-1Q15270 411 aaPredicted RBP15.66■□□□□ 0.1
TMEM253-203ENST00000554329 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
TMEM253-203ENST00000554329 TAF1LQ8IZX4 1826 aa15.66■□□□□ 0.1
TMEM253-203ENST00000554329 KDRP35968 1356 aa15.65■□□□□ 0.1
TMEM253-203ENST00000554329 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
TMEM253-203ENST00000554329 TMOD3Q9NYL9 352 aa15.65■□□□□ 0.1
TMEM253-203ENST00000554329 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
TMEM253-203ENST00000554329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.64■□□□□ 0.09
TMEM253-203ENST00000554329 MTHFSDQ2M296 383 aaKnown RBP15.63■□□□□ 0.09
TMEM253-203ENST00000554329 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
TMEM253-203ENST00000554329 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
TMEM253-203ENST00000554329 SLC27A3Q5K4L6 730 aa15.62■□□□□ 0.09
TMEM253-203ENST00000554329 LGR6Q9HBX8 967 aa15.62■□□□□ 0.09
TMEM253-203ENST00000554329 SPON1Q9HCB6 807 aa15.62■□□□□ 0.09
TMEM253-203ENST00000554329 ATG3Q9NT62 314 aa15.62■□□□□ 0.09
TMEM253-203ENST00000554329 TFCP2L1Q9NZI6 479 aa15.62■□□□□ 0.09
TMEM253-203ENST00000554329 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
TMEM253-203ENST00000554329 C4BP0C0L5 1744 aa15.61■□□□□ 0.09
TMEM253-203ENST00000554329 PHF14O94880 888 aa15.61■□□□□ 0.09
TMEM253-203ENST00000554329 ITPK1Q13572 414 aa15.61■□□□□ 0.09
TMEM253-203ENST00000554329 MSL1Q68DK7 614 aa15.61■□□□□ 0.09
TMEM253-203ENST00000554329 LINC00116Q8NCU8 138 aa15.61■□□□□ 0.09
TMEM253-203ENST00000554329 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
TMEM253-203ENST00000554329 PPP1R1BQ9UD71 204 aaPredicted RBP15.61■□□□□ 0.09
TMEM253-203ENST00000554329 CABP4P57796 275 aa15.6■□□□□ 0.09
TMEM253-203ENST00000554329 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
TMEM253-203ENST00000554329 SLC4A9Q96Q91 983 aa15.6■□□□□ 0.09
TMEM253-203ENST00000554329 PTGER2P43116 358 aa15.59■□□□□ 0.09
TMEM253-203ENST00000554329 NFATC2IPQ8NCF5 419 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms