RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 ZBTB7AO95365 584 aa30.47■■■□□ 2.47
RCCD1-202ENST00000554302 PTGER2P43116 358 aa30.47■■■□□ 2.47
RCCD1-202ENST00000554302 ZCRB1Q8TBF4 217 aaKnown RBP30.46■■■□□ 2.47
RCCD1-202ENST00000554302 LRRC4BQ9NT99 713 aa30.46■■■□□ 2.47
RCCD1-202ENST00000554302 INSRP06213 1382 aa30.45■■■□□ 2.47
RCCD1-202ENST00000554302 NPM3O75607 178 aaKnown RBP30.45■■■□□ 2.47
RCCD1-202ENST00000554302 FLT4P35916 1363 aa30.43■■■□□ 2.46
RCCD1-202ENST00000554302 HSP90AB2PQ58FF8 381 aa30.43■■■□□ 2.46
RCCD1-202ENST00000554302 SMG6Q86US8 1419 aaKnown RBP30.43■■■□□ 2.46
RCCD1-202ENST00000554302 DOT1LQ8TEK3 1739 aa30.43■■■□□ 2.46
RCCD1-202ENST00000554302 NSD3Q9BZ95 1437 aa30.43■■■□□ 2.46
RCCD1-202ENST00000554302 CGNL1Q0VF96 1302 aa30.43■■■□□ 2.46
RCCD1-202ENST00000554302 KAT6BQ8WYB5 2073 aa30.42■■■□□ 2.46
RCCD1-202ENST00000554302 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
RCCD1-202ENST00000554302 NSD2O96028 1365 aa30.41■■■□□ 2.46
RCCD1-202ENST00000554302 MTFR1LQ9H019 292 aa30.41■■■□□ 2.46
RCCD1-202ENST00000554302 ATF5Q9Y2D1 282 aaPredicted RBP30.41■■■□□ 2.46
RCCD1-202ENST00000554302 PRIM1P49642 420 aaKnown RBP30.4■■■□□ 2.46
RCCD1-202ENST00000554302 MAPK8IP2Q13387 824 aaPredicted RBP30.4■■■□□ 2.46
RCCD1-202ENST00000554302 ZNF827Q17R98 1081 aa30.4■■■□□ 2.46
RCCD1-202ENST00000554302 SLC27A3Q5K4L6 730 aa30.4■■■□□ 2.46
RCCD1-202ENST00000554302 SGIP1Q9BQI5 828 aa30.4■■■□□ 2.46
RCCD1-202ENST00000554302 USHBP1Q8N6Y0 703 aa30.39■■■□□ 2.46
RCCD1-202ENST00000554302 LY75O60449 1722 aa30.37■■■□□ 2.45
RCCD1-202ENST00000554302 AKT1S1Q96B36 256 aa30.37■■■□□ 2.45
RCCD1-202ENST00000554302 RAPGEF4Q8WZA2 1011 aa30.36■■■□□ 2.45
RCCD1-202ENST00000554302 ANKRD26Q9UPS8 1709 aa30.36■■■□□ 2.45
RCCD1-202ENST00000554302 SYTL4Q96C24 671 aaPredicted RBP30.35■■■□□ 2.45
RCCD1-202ENST00000554302 QSER1Q2KHR3 1735 aa30.35■■■□□ 2.45
RCCD1-202ENST00000554302 EMILIN1Q9Y6C2 1016 aa30.34■■■□□ 2.45
RCCD1-202ENST00000554302 NCAPD2Q15021 1401 aa30.33■■■□□ 2.45
RCCD1-202ENST00000554302 TATP17735 454 aaPredicted RBP30.33■■■□□ 2.45
RCCD1-202ENST00000554302 WASHC2AQ641Q2 1341 aa30.28■■■□□ 2.44
RCCD1-202ENST00000554302 PCDH11XQ9BZA7 1347 aa30.28■■■□□ 2.44
RCCD1-202ENST00000554302 PCDH11YQ9BZA8 1340 aa30.28■■■□□ 2.44
RCCD1-202ENST00000554302 DCAF8L1A6NGE4 600 aa30.28■■■□□ 2.44
RCCD1-202ENST00000554302 SYT17Q9BSW7 474 aa30.28■■■□□ 2.44
RCCD1-202ENST00000554302 FHDC1Q9C0D6 1143 aaPredicted RBP30.28■■■□□ 2.44
RCCD1-202ENST00000554302 KCNQ4P56696 695 aa30.27■■■□□ 2.44
RCCD1-202ENST00000554302 SLC16A10Q8TF71 515 aa30.27■■■□□ 2.44
RCCD1-202ENST00000554302 PNPLA7Q6ZV29 1317 aa30.26■■■□□ 2.44
RCCD1-202ENST00000554302 COL24A1Q17RW2 1714 aa30.26■■■□□ 2.43
RCCD1-202ENST00000554302 PKD1L3Q7Z443 1732 aa30.26■■■□□ 2.43
RCCD1-202ENST00000554302 TUBGCP6Q96RT7 1819 aa30.26■■■□□ 2.43
RCCD1-202ENST00000554302 UTRNP46939 3433 aa30.25■■■□□ 2.43
RCCD1-202ENST00000554302 MAP2P11137 1827 aaKnown RBP30.24■■■□□ 2.43
RCCD1-202ENST00000554302 CYP27B1O15528 508 aa30.24■■■□□ 2.43
RCCD1-202ENST00000554302 YY1P25490 414 aa30.24■■■□□ 2.43
RCCD1-202ENST00000554302 EIF4G2P78344 907 aaKnown RBP eCLIP30.24■■■□□ 2.43
RCCD1-202ENST00000554302 ARXQ96QS3 562 aa30.24■■■□□ 2.43
RCCD1-202ENST00000554302 MAP3K5Q99683 1374 aa30.24■■■□□ 2.43
RCCD1-202ENST00000554302 POLKQ9UBT6 870 aa30.23■■■□□ 2.43
RCCD1-202ENST00000554302 HSPA5P11021 654 aaKnown RBP30.22■■■□□ 2.43
RCCD1-202ENST00000554302 CCNL1Q9UK58 526 aaPredicted RBP30.22■■■□□ 2.43
RCCD1-202ENST00000554302 PPM1GO15355 546 aaPredicted RBP30.21■■■□□ 2.43
RCCD1-202ENST00000554302 TFCP2L1Q9NZI6 479 aa30.21■■■□□ 2.43
RCCD1-202ENST00000554302 TOGARAM1Q9Y4F4 1720 aa30.2■■■□□ 2.43
RCCD1-202ENST00000554302 EYA1Q99502 592 aa30.19■■■□□ 2.42
RCCD1-202ENST00000554302 NKX1-1Q15270 411 aaPredicted RBP30.18■■■□□ 2.42
RCCD1-202ENST00000554302 POLR3GLQ9BT43 218 aa30.18■■■□□ 2.42
RCCD1-202ENST00000554302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.16■■■□□ 2.42
RCCD1-202ENST00000554302 ITGB4P16144 1822 aa30.15■■■□□ 2.42
RCCD1-202ENST00000554302 CCER1Q8TC90 406 aaPredicted RBP30.15■■■□□ 2.42
RCCD1-202ENST00000554302 MPRIPQ6WCQ1 1025 aa30.14■■■□□ 2.42
RCCD1-202ENST00000554302 PALLDQ8WX93 1383 aa30.14■■■□□ 2.41
RCCD1-202ENST00000554302 C5P01031 1676 aa30.14■■■□□ 2.41
RCCD1-202ENST00000554302 PANK3Q9H999 370 aa30.13■■■□□ 2.41
RCCD1-202ENST00000554302 SPG7Q9UQ90 795 aa30.13■■■□□ 2.41
RCCD1-202ENST00000554302 TAF1LQ8IZX4 1826 aa30.11■■■□□ 2.41
RCCD1-202ENST00000554302 POLD1P28340 1107 aa30.11■■■□□ 2.41
RCCD1-202ENST00000554302 EIF4A2Q14240 407 aaKnown RBP30.11■■■□□ 2.41
RCCD1-202ENST00000554302 PLEKHG2Q9H7P9 1386 aa30.11■■■□□ 2.41
RCCD1-202ENST00000554302 HMGB2P26583 209 aaKnown RBP30.1■■■□□ 2.41
RCCD1-202ENST00000554302 COL23A1Q86Y22 540 aaPredicted RBP30.1■■■□□ 2.41
RCCD1-202ENST00000554302 TNNT2P45379 298 aaPredicted RBP30.08■■■□□ 2.41
RCCD1-202ENST00000554302 PIGBQ92521 554 aa30.08■■■□□ 2.41
RCCD1-202ENST00000554302 SMARCC1Q92922 1105 aaPredicted RBP30.08■■■□□ 2.41
RCCD1-202ENST00000554302 IGSF1Q8N6C5 1336 aa30.05■■■□□ 2.4
RCCD1-202ENST00000554302 PHKG2P15735 406 aa30.05■■■□□ 2.4
RCCD1-202ENST00000554302 GOLGB1Q14789 3259 aaKnown RBP30.04■■■□□ 2.4
RCCD1-202ENST00000554302 IFNL2Q8IZJ0 200 aa30.04■■■□□ 2.4
RCCD1-202ENST00000554302 C4BP0C0L5 1744 aa30.03■■■□□ 2.4
RCCD1-202ENST00000554302 FLAD1Q8NFF5 587 aa30.02■■■□□ 2.4
RCCD1-202ENST00000554302 TMOD3Q9NYL9 352 aa29.98■■■□□ 2.39
RCCD1-202ENST00000554302 CHD4Q14839 1912 aa29.98■■■□□ 2.39
RCCD1-202ENST00000554302 UBR3Q6ZT12 1888 aa29.96■■■□□ 2.39
RCCD1-202ENST00000554302 LOC102724428A0A0B4J2F2 783 aa29.96■■■□□ 2.39
RCCD1-202ENST00000554302 SIK1P57059 783 aa29.96■■■□□ 2.39
RCCD1-202ENST00000554302 MORC1Q86VD1 984 aa29.96■■■□□ 2.39
RCCD1-202ENST00000554302 AMIGO3Q86WK7 504 aa29.96■■■□□ 2.39
RCCD1-202ENST00000554302 KLHL34Q8N239 644 aa29.96■■■□□ 2.39
RCCD1-202ENST00000554302 NLGN2Q8NFZ4 835 aa29.96■■■□□ 2.39
RCCD1-202ENST00000554302 ASAP1Q9ULH1 1129 aa29.95■■■□□ 2.39
RCCD1-202ENST00000554302 MSL1Q68DK7 614 aa29.94■■■□□ 2.38
RCCD1-202ENST00000554302 AK7Q96M32 723 aa29.94■■■□□ 2.38
RCCD1-202ENST00000554302 GPR162Q16538 588 aa29.93■■■□□ 2.38
RCCD1-202ENST00000554302 ZNF784Q8NCA9 323 aaPredicted RBP29.93■■■□□ 2.38
RCCD1-202ENST00000554302 LINC00116Q8NCU8 138 aa29.93■■■□□ 2.38
RCCD1-202ENST00000554302 ATG3Q9NT62 314 aa29.93■■■□□ 2.38
RCCD1-202ENST00000554302 KNSTRNQ9Y448 316 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms