RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 HDGFL2Q7Z4V5 671 aaPredicted RBP19.77■□□□□ 0.76
NEDD1-206ENST00000554226 A0A1W2PP64 1363 aa19.77■□□□□ 0.76
NEDD1-206ENST00000554226 RGPD2P0DJD1 1756 aa19.75■□□□□ 0.75
NEDD1-206ENST00000554226 DDX54Q8TDD1 881 aaKnown RBP19.75■□□□□ 0.75
NEDD1-206ENST00000554226 C5P01031 1676 aa19.75■□□□□ 0.75
NEDD1-206ENST00000554226 ADCY9O60503 1353 aa19.74■□□□□ 0.75
NEDD1-206ENST00000554226 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
NEDD1-206ENST00000554226 TERF2IPQ9NYB0 399 aa19.74■□□□□ 0.75
NEDD1-206ENST00000554226 MEGF6O75095 1541 aa19.73■□□□□ 0.75
NEDD1-206ENST00000554226 HSPA6P17066 643 aa19.73■□□□□ 0.75
NEDD1-206ENST00000554226 SLC12A5Q9H2X9 1139 aa19.73■□□□□ 0.75
NEDD1-206ENST00000554226 TAF1LQ8IZX4 1826 aa19.73■□□□□ 0.75
NEDD1-206ENST00000554226 SYTL4Q96C24 671 aaPredicted RBP19.72■□□□□ 0.75
NEDD1-206ENST00000554226 GPBP1L1Q9HC44 474 aaPredicted RBP19.72■□□□□ 0.75
NEDD1-206ENST00000554226 COL23A1Q86Y22 540 aaPredicted RBP19.71■□□□□ 0.75
NEDD1-206ENST00000554226 SIN3AQ96ST3 1273 aa19.71■□□□□ 0.75
NEDD1-206ENST00000554226 CCNL1Q9UK58 526 aaPredicted RBP19.71■□□□□ 0.75
NEDD1-206ENST00000554226 HMGB2P26583 209 aaKnown RBP19.7■□□□□ 0.74
NEDD1-206ENST00000554226 ZCRB1Q8TBF4 217 aaKnown RBP19.7■□□□□ 0.74
NEDD1-206ENST00000554226 TMC1Q8TDI8 760 aa19.7■□□□□ 0.74
NEDD1-206ENST00000554226 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
NEDD1-206ENST00000554226 MAP3K19Q56UN5 1328 aa19.7■□□□□ 0.74
NEDD1-206ENST00000554226 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
NEDD1-206ENST00000554226 HOXC9P31274 260 aa19.69■□□□□ 0.74
NEDD1-206ENST00000554226 CD2APQ9Y5K6 639 aa19.69■□□□□ 0.74
NEDD1-206ENST00000554226 USP47Q96K76 1375 aa19.69■□□□□ 0.74
NEDD1-206ENST00000554226 MSL1Q68DK7 614 aa19.68■□□□□ 0.74
NEDD1-206ENST00000554226 MSH5O43196 834 aa19.67■□□□□ 0.74
NEDD1-206ENST00000554226 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
NEDD1-206ENST00000554226 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
NEDD1-206ENST00000554226 FLAD1Q8NFF5 587 aa19.65■□□□□ 0.74
NEDD1-206ENST00000554226 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
NEDD1-206ENST00000554226 COG3Q96JB2 828 aa19.64■□□□□ 0.73
NEDD1-206ENST00000554226 UBR3Q6ZT12 1888 aa19.64■□□□□ 0.73
NEDD1-206ENST00000554226 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
NEDD1-206ENST00000554226 ZNF526Q8TF50 670 aaPredicted RBP19.63■□□□□ 0.73
NEDD1-206ENST00000554226 ITGB4P16144 1822 aa19.62■□□□□ 0.73
NEDD1-206ENST00000554226 AMPHP49418 695 aa19.61■□□□□ 0.73
NEDD1-206ENST00000554226 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
NEDD1-206ENST00000554226 CICQ96RK0 1608 aaPredicted RBP19.61■□□□□ 0.73
NEDD1-206ENST00000554226 PKD1L3Q7Z443 1732 aa19.6■□□□□ 0.73
NEDD1-206ENST00000554226 NBPF6Q5VWK0 638 aa19.6■□□□□ 0.73
NEDD1-206ENST00000554226 NBPF4Q96M43 638 aa19.6■□□□□ 0.73
NEDD1-206ENST00000554226 SMG6Q86US8 1419 aaKnown RBP19.59■□□□□ 0.73
NEDD1-206ENST00000554226 PALLDQ8WX93 1383 aa19.59■□□□□ 0.73
NEDD1-206ENST00000554226 PCDH11XQ9BZA7 1347 aa19.59■□□□□ 0.73
NEDD1-206ENST00000554226 PCDH11YQ9BZA8 1340 aa19.59■□□□□ 0.73
NEDD1-206ENST00000554226 KIF3CO14782 793 aa19.59■□□□□ 0.73
NEDD1-206ENST00000554226 TESK2Q96S53 571 aa19.59■□□□□ 0.73
NEDD1-206ENST00000554226 MAP2P11137 1827 aaKnown RBP19.59■□□□□ 0.73
NEDD1-206ENST00000554226 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
NEDD1-206ENST00000554226 KIF24Q5T7B8 1368 aa19.58■□□□□ 0.73
NEDD1-206ENST00000554226 SLC24A1O60721 1099 aa19.58■□□□□ 0.72
NEDD1-206ENST00000554226 RAPGEF4Q8WZA2 1011 aa19.58■□□□□ 0.72
NEDD1-206ENST00000554226 IGSF1Q8N6C5 1336 aa19.57■□□□□ 0.72
NEDD1-206ENST00000554226 INSRP06213 1382 aa19.57■□□□□ 0.72
NEDD1-206ENST00000554226 FBLN1P23142 703 aa19.56■□□□□ 0.72
NEDD1-206ENST00000554226 KIF13BQ9NQT8 1826 aa19.55■□□□□ 0.72
NEDD1-206ENST00000554226 NCAPD2Q15021 1401 aa19.55■□□□□ 0.72
NEDD1-206ENST00000554226 KIF20BQ96Q89 1820 aa19.54■□□□□ 0.72
NEDD1-206ENST00000554226 TATP17735 454 aaPredicted RBP19.54■□□□□ 0.72
NEDD1-206ENST00000554226 SMARCC1Q92922 1105 aaPredicted RBP19.54■□□□□ 0.72
NEDD1-206ENST00000554226 APLP1P51693 650 aa19.53■□□□□ 0.72
NEDD1-206ENST00000554226 AMIGO3Q86WK7 504 aa19.53■□□□□ 0.72
NEDD1-206ENST00000554226 KIAA1551Q9HCM1 1747 aa19.52■□□□□ 0.72
NEDD1-206ENST00000554226 ANKRD26Q9UPS8 1709 aa19.52■□□□□ 0.72
NEDD1-206ENST00000554226 FYB1O15117 783 aa19.52■□□□□ 0.72
NEDD1-206ENST00000554226 CYP27B1O15528 508 aa19.52■□□□□ 0.72
NEDD1-206ENST00000554226 RRS1Q15050 365 aaKnown RBP19.52■□□□□ 0.72
NEDD1-206ENST00000554226 USHBP1Q8N6Y0 703 aa19.52■□□□□ 0.72
NEDD1-206ENST00000554226 WWC3Q9ULE0 1092 aa19.52■□□□□ 0.72
NEDD1-206ENST00000554226 FLT4P35916 1363 aa19.52■□□□□ 0.72
NEDD1-206ENST00000554226 SSFA2P28290 1259 aa19.51■□□□□ 0.71
NEDD1-206ENST00000554226 NKX1-1Q15270 411 aaPredicted RBP19.5■□□□□ 0.71
NEDD1-206ENST00000554226 MPRIPQ6WCQ1 1025 aa19.5■□□□□ 0.71
NEDD1-206ENST00000554226 DNAJC5GQ8N7S2 189 aa19.5■□□□□ 0.71
NEDD1-206ENST00000554226 AK7Q96M32 723 aa19.5■□□□□ 0.71
NEDD1-206ENST00000554226 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
NEDD1-206ENST00000554226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.49■□□□□ 0.71
NEDD1-206ENST00000554226 HSP90AB2PQ58FF8 381 aa19.49■□□□□ 0.71
NEDD1-206ENST00000554226 ZNF831Q5JPB2 1677 aa19.48■□□□□ 0.71
NEDD1-206ENST00000554226 TOMM70O94826 608 aa19.47■□□□□ 0.71
NEDD1-206ENST00000554226 PHF14O94880 888 aa19.47■□□□□ 0.71
NEDD1-206ENST00000554226 GGNBP2Q9H3C7 697 aa19.47■□□□□ 0.71
NEDD1-206ENST00000554226 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
NEDD1-206ENST00000554226 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
NEDD1-206ENST00000554226 PIGBQ92521 554 aa19.46■□□□□ 0.71
NEDD1-206ENST00000554226 PXDNLA1KZ92 1463 aa19.45■□□□□ 0.7
NEDD1-206ENST00000554226 BRCA1P38398 1863 aaKnown RBP19.45■□□□□ 0.7
NEDD1-206ENST00000554226 PLEKHG2Q9H7P9 1386 aa19.44■□□□□ 0.7
NEDD1-206ENST00000554226 LOC102724428A0A0B4J2F2 783 aa19.44■□□□□ 0.7
NEDD1-206ENST00000554226 SIK1P57059 783 aa19.44■□□□□ 0.7
NEDD1-206ENST00000554226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.7
NEDD1-206ENST00000554226 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
NEDD1-206ENST00000554226 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
NEDD1-206ENST00000554226 WDR90Q96KV7 1748 aa19.41■□□□□ 0.7
NEDD1-206ENST00000554226 C10orf71Q711Q0 1435 aa19.41■□□□□ 0.7
NEDD1-206ENST00000554226 COL5A3P25940 1745 aaPredicted RBP19.4■□□□□ 0.7
NEDD1-206ENST00000554226 ARFGEF1Q9Y6D6 1849 aa19.4■□□□□ 0.7
NEDD1-206ENST00000554226 TGFB2P61812 414 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms