RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
LINC00520-203ENST00000554221 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
LINC00520-203ENST00000554221 KCNQ4P56696 695 aa9.17□□□□□ -0.94
LINC00520-203ENST00000554221 SPDYE2Q495Y8 402 aa9.17□□□□□ -0.94
LINC00520-203ENST00000554221 NBPF6Q5VWK0 638 aa9.17□□□□□ -0.94
LINC00520-203ENST00000554221 NBPF4Q96M43 638 aa9.17□□□□□ -0.94
LINC00520-203ENST00000554221 COL18A1P39060 1754 aa9.17□□□□□ -0.94
LINC00520-203ENST00000554221 USP47Q96K76 1375 aa9.16□□□□□ -0.94
LINC00520-203ENST00000554221 NINLQ9Y2I6 1382 aa9.16□□□□□ -0.94
LINC00520-203ENST00000554221 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
LINC00520-203ENST00000554221 YY1P25490 414 aa9.16□□□□□ -0.94
LINC00520-203ENST00000554221 HSP90AB2PQ58FF8 381 aa9.16□□□□□ -0.94
LINC00520-203ENST00000554221 RAPGEF4Q8WZA2 1011 aa9.16□□□□□ -0.94
LINC00520-203ENST00000554221 CARD14Q9BXL6 1004 aa9.16□□□□□ -0.94
LINC00520-203ENST00000554221 LRRC4BQ9NT99 713 aa9.16□□□□□ -0.94
LINC00520-203ENST00000554221 TNS1Q9HBL0 1735 aaKnown RBP9.16□□□□□ -0.94
LINC00520-203ENST00000554221 BCL9O00512 1426 aa9.15□□□□□ -0.94
LINC00520-203ENST00000554221 HAX1O00165 279 aa9.15□□□□□ -0.94
LINC00520-203ENST00000554221 TFCP2L1Q9NZI6 479 aa9.15□□□□□ -0.94
LINC00520-203ENST00000554221 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
LINC00520-203ENST00000554221 TNS2Q63HR2 1409 aa9.14□□□□□ -0.95
LINC00520-203ENST00000554221 PARP4Q9UKK3 1724 aaKnown RBP9.14□□□□□ -0.95
LINC00520-203ENST00000554221 ANKRD36BQ8N2N9 1353 aa9.14□□□□□ -0.95
LINC00520-203ENST00000554221 PTGER2P43116 358 aa9.14□□□□□ -0.95
LINC00520-203ENST00000554221 TNNT2P45379 298 aaPredicted RBP9.14□□□□□ -0.95
LINC00520-203ENST00000554221 KLHL34Q8N239 644 aa9.14□□□□□ -0.95
LINC00520-203ENST00000554221 CCER1Q8TC90 406 aaPredicted RBP9.14□□□□□ -0.95
LINC00520-203ENST00000554221 MTFR1LQ9H019 292 aa9.14□□□□□ -0.95
LINC00520-203ENST00000554221 LRP5O75197 1615 aa9.13□□□□□ -0.95
LINC00520-203ENST00000554221 ZNF827Q17R98 1081 aa9.13□□□□□ -0.95
LINC00520-203ENST00000554221 SLC27A3Q5K4L6 730 aa9.13□□□□□ -0.95
LINC00520-203ENST00000554221 ARXQ96QS3 562 aa9.13□□□□□ -0.95
LINC00520-203ENST00000554221 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
LINC00520-203ENST00000554221 EMILIN1Q9Y6C2 1016 aa9.13□□□□□ -0.95
LINC00520-203ENST00000554221 AKAP12Q02952 1782 aa9.12□□□□□ -0.95
LINC00520-203ENST00000554221 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
LINC00520-203ENST00000554221 SYT17Q9BSW7 474 aa9.12□□□□□ -0.95
LINC00520-203ENST00000554221 CCNL1Q9UK58 526 aaPredicted RBP9.12□□□□□ -0.95
LINC00520-203ENST00000554221 LRRC37A3O60309 1634 aa9.12□□□□□ -0.95
LINC00520-203ENST00000554221 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
LINC00520-203ENST00000554221 EIF4G2P78344 907 aaKnown RBP eCLIP9.11□□□□□ -0.95
LINC00520-203ENST00000554221 RGPD5Q99666 1765 aa9.11□□□□□ -0.95
LINC00520-203ENST00000554221 HSPA5P11021 654 aaKnown RBP9.1□□□□□ -0.95
LINC00520-203ENST00000554221 POLD1P28340 1107 aa9.1□□□□□ -0.95
LINC00520-203ENST00000554221 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC00520-203ENST00000554221 PELP1Q8IZL8 1130 aaKnown RBP9.1□□□□□ -0.95
LINC00520-203ENST00000554221 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
LINC00520-203ENST00000554221 SMG6Q86US8 1419 aaKnown RBP9.1□□□□□ -0.95
LINC00520-203ENST00000554221 INSRP06213 1382 aa9.1□□□□□ -0.95
LINC00520-203ENST00000554221 ABCC6O95255 1503 aa9.1□□□□□ -0.95
LINC00520-203ENST00000554221 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
LINC00520-203ENST00000554221 NUP188Q5SRE5 1749 aa9.09□□□□□ -0.95
LINC00520-203ENST00000554221 MON2Q7Z3U7 1717 aa9.09□□□□□ -0.95
LINC00520-203ENST00000554221 NSD3Q9BZ95 1437 aa9.09□□□□□ -0.95
LINC00520-203ENST00000554221 GPR162Q16538 588 aa9.09□□□□□ -0.95
LINC00520-203ENST00000554221 SPG7Q9UQ90 795 aa9.09□□□□□ -0.95
LINC00520-203ENST00000554221 CYP27B1O15528 508 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 EYA1Q99502 592 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 SGIP1Q9BQI5 828 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 PANK3Q9H999 370 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 POLKQ9UBT6 870 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 RTL1A6NKG5 1358 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 FLT4P35916 1363 aa9.08□□□□□ -0.96
LINC00520-203ENST00000554221 PNPLA7Q6ZV29 1317 aa9.07□□□□□ -0.96
LINC00520-203ENST00000554221 PCDH11XQ9BZA7 1347 aa9.07□□□□□ -0.96
LINC00520-203ENST00000554221 PCDH11YQ9BZA8 1340 aa9.07□□□□□ -0.96
LINC00520-203ENST00000554221 CLSPNQ9HAW4 1339 aa9.07□□□□□ -0.96
LINC00520-203ENST00000554221 RREB1Q92766 1687 aa9.07□□□□□ -0.96
LINC00520-203ENST00000554221 MSL1Q68DK7 614 aa9.07□□□□□ -0.96
LINC00520-203ENST00000554221 PIGBQ92521 554 aa9.07□□□□□ -0.96
LINC00520-203ENST00000554221 WASHC2AQ641Q2 1341 aa9.06□□□□□ -0.96
LINC00520-203ENST00000554221 MEGF6O75095 1541 aa9.06□□□□□ -0.96
LINC00520-203ENST00000554221 MORC1Q86VD1 984 aa9.06□□□□□ -0.96
LINC00520-203ENST00000554221 COL23A1Q86Y22 540 aaPredicted RBP9.06□□□□□ -0.96
LINC00520-203ENST00000554221 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
LINC00520-203ENST00000554221 PHF14O94880 888 aa9.05□□□□□ -0.96
LINC00520-203ENST00000554221 EIF4A2Q14240 407 aaKnown RBP9.05□□□□□ -0.96
LINC00520-203ENST00000554221 SMIM5Q71RC9 77 aa9.05□□□□□ -0.96
LINC00520-203ENST00000554221 IFNL2Q8IZJ0 200 aa9.05□□□□□ -0.96
LINC00520-203ENST00000554221 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
LINC00520-203ENST00000554221 AK7Q96M32 723 aa9.05□□□□□ -0.96
LINC00520-203ENST00000554221 SBF2Q86WG5 1849 aa9.05□□□□□ -0.96
LINC00520-203ENST00000554221 LTN1O94822 1766 aa9.04□□□□□ -0.96
LINC00520-203ENST00000554221 NSD2O96028 1365 aa9.04□□□□□ -0.96
LINC00520-203ENST00000554221 HMGB2P26583 209 aaKnown RBP9.04□□□□□ -0.96
LINC00520-203ENST00000554221 MKRN4PQ13434 485 aaPredicted RBP9.04□□□□□ -0.96
LINC00520-203ENST00000554221 CNGB1Q14028 1251 aaPredicted RBP9.04□□□□□ -0.96
LINC00520-203ENST00000554221 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
LINC00520-203ENST00000554221 TMOD3Q9NYL9 352 aa9.04□□□□□ -0.96
LINC00520-203ENST00000554221 ASAP1Q9ULH1 1129 aa9.04□□□□□ -0.96
LINC00520-203ENST00000554221 KNSTRNQ9Y448 316 aa9.04□□□□□ -0.96
LINC00520-203ENST00000554221 KIF24Q5T7B8 1368 aa9.03□□□□□ -0.96
LINC00520-203ENST00000554221 PALLDQ8WX93 1383 aa9.03□□□□□ -0.96
LINC00520-203ENST00000554221 PHKG2P15735 406 aa9.03□□□□□ -0.96
LINC00520-203ENST00000554221 NKX1-1Q15270 411 aaPredicted RBP9.03□□□□□ -0.96
LINC00520-203ENST00000554221 NLGN2Q8NFZ4 835 aa9.03□□□□□ -0.96
LINC00520-203ENST00000554221 KAT6BQ8WYB5 2073 aa9.02□□□□□ -0.97
LINC00520-203ENST00000554221 USP54Q70EL1 1684 aa9.02□□□□□ -0.97
LINC00520-203ENST00000554221 ATP6V1AP38606 617 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms