RNA–Protein interactions for RNA: ENST00000554207.1

PSMA3-205, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-205ENST00000554207 TMPRSS4Q9NRS4 437 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 KIAA1024Q9UPX6 916 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 MAP4K5Q9Y4K4 846 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 ATG7O95352 703 aa9.67□□□□□ -0.86
PSMA3-205ENST00000554207 NR3C2P08235 984 aa9.67□□□□□ -0.86
PSMA3-205ENST00000554207 NFX1Q12986 1120 aaKnown RBP9.67□□□□□ -0.86
PSMA3-205ENST00000554207 EML3Q32P44 896 aa9.67□□□□□ -0.86
PSMA3-205ENST00000554207 MAP7D1Q3KQU3 841 aa9.67□□□□□ -0.86
PSMA3-205ENST00000554207 ACIN1Q9UKV3 1341 aaKnown RBP9.66□□□□□ -0.86
PSMA3-205ENST00000554207 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L15C9J2P7 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L13C9JLJ4 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L11C9JVI0 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L21D6R901 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L18D6R9N7 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L22D6RA61 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
PSMA3-205ENST00000554207 RASA1P20936 1047 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 ATP13A2Q9NQ11 1180 aa9.66□□□□□ -0.86
PSMA3-205ENST00000554207 CDV3Q9UKY7 258 aaKnown RBP9.66□□□□□ -0.86
PSMA3-205ENST00000554207 PTK7Q13308 1070 aa9.65□□□□□ -0.86
PSMA3-205ENST00000554207 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
PSMA3-205ENST00000554207 OGFOD1Q8N543 542 aa9.65□□□□□ -0.86
PSMA3-205ENST00000554207 ZNF594Q96JF6 807 aaPredicted RBP9.65□□□□□ -0.86
PSMA3-205ENST00000554207 TMEM88BA6NKF7 163 aa9.64□□□□□ -0.87
PSMA3-205ENST00000554207 STAU1O95793 577 aaKnown RBP9.64□□□□□ -0.87
PSMA3-205ENST00000554207 SEPT12Q8IYM1 358 aa9.64□□□□□ -0.87
PSMA3-205ENST00000554207 NOVA2Q9UNW9 492 aaKnown RBP9.64□□□□□ -0.87
PSMA3-205ENST00000554207 ZBTB7BO15156 539 aaPredicted RBP9.63□□□□□ -0.87
PSMA3-205ENST00000554207 ADH1CP00326 375 aa9.63□□□□□ -0.87
PSMA3-205ENST00000554207 TMEM164Q5U3C3 297 aa9.63□□□□□ -0.87
PSMA3-205ENST00000554207 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
PSMA3-205ENST00000554207 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 ATP5J2-PTCD1G3V325 749 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 DKK1O94907 266 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 GTF2IP78347 998 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
PSMA3-205ENST00000554207 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
PSMA3-205ENST00000554207 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 PCDHGA11Q9Y5H2 935 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 WASF2Q9Y6W5 498 aa9.62□□□□□ -0.87
PSMA3-205ENST00000554207 LGR5O75473 907 aa9.61□□□□□ -0.87
PSMA3-205ENST00000554207 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
PSMA3-205ENST00000554207 LARP1Q6PKG0 1096 aaKnown RBP9.61□□□□□ -0.87
PSMA3-205ENST00000554207 MPNDQ8N594 471 aa9.61□□□□□ -0.87
PSMA3-205ENST00000554207 TRAIPQ9BWF2 469 aa9.61□□□□□ -0.87
PSMA3-205ENST00000554207 SLAIN2Q9P270 581 aa9.61□□□□□ -0.87
PSMA3-205ENST00000554207 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
PSMA3-205ENST00000554207 SNRPBP14678 240 aaKnown RBP9.6□□□□□ -0.87
PSMA3-205ENST00000554207 DPYDQ12882 1025 aa9.6□□□□□ -0.87
PSMA3-205ENST00000554207 CCDC116Q8IYX3 515 aa9.6□□□□□ -0.87
PSMA3-205ENST00000554207 SENP2Q9HC62 589 aa9.6□□□□□ -0.87
PSMA3-205ENST00000554207 DNAAF2Q9NVR5 837 aaKnown RBP9.6□□□□□ -0.87
PSMA3-205ENST00000554207 PODXL2Q9NZ53 605 aa9.6□□□□□ -0.87
PSMA3-205ENST00000554207 LILRA1O75019 489 aa9.59□□□□□ -0.87
PSMA3-205ENST00000554207 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
PSMA3-205ENST00000554207 ELOAQ14241 798 aaKnown RBP9.59□□□□□ -0.87
PSMA3-205ENST00000554207 ANKMY2Q8IV38 441 aa9.59□□□□□ -0.87
PSMA3-205ENST00000554207 OSBPL3Q9H4L5 887 aa9.59□□□□□ -0.87
PSMA3-205ENST00000554207 SFI1A8K8P3 1242 aa9.58□□□□□ -0.88
PSMA3-205ENST00000554207 ADD1P35611 737 aaKnown RBP9.58□□□□□ -0.88
PSMA3-205ENST00000554207 USP4Q13107 963 aa9.58□□□□□ -0.88
PSMA3-205ENST00000554207 NNTQ13423 1086 aa9.58□□□□□ -0.88
PSMA3-205ENST00000554207 TPCN2Q8NHX9 752 aa9.58□□□□□ -0.88
PSMA3-205ENST00000554207 TRIM47Q96LD4 638 aa9.58□□□□□ -0.88
PSMA3-205ENST00000554207 PSME1Q06323 249 aa9.57□□□□□ -0.88
PSMA3-205ENST00000554207 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
PSMA3-205ENST00000554207 NR5A1Q13285 461 aa9.57□□□□□ -0.88
PSMA3-205ENST00000554207 CCDC102BQ68D86 513 aa9.57□□□□□ -0.88
PSMA3-205ENST00000554207 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
PSMA3-205ENST00000554207 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
PSMA3-205ENST00000554207 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
PSMA3-205ENST00000554207 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
PSMA3-205ENST00000554207 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
PSMA3-205ENST00000554207 MYCP01106 439 aaPredicted RBP9.55□□□□□ -0.88
PSMA3-205ENST00000554207 ATP1A2P50993 1020 aa9.55□□□□□ -0.88
PSMA3-205ENST00000554207 CBLBQ13191 982 aa9.55□□□□□ -0.88
PSMA3-205ENST00000554207 SIX5Q8N196 739 aa9.55□□□□□ -0.88
PSMA3-205ENST00000554207 LARGE2Q8N3Y3 721 aa9.55□□□□□ -0.88
PSMA3-205ENST00000554207 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
PSMA3-205ENST00000554207 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
PSMA3-205ENST00000554207 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
PSMA3-205ENST00000554207 TERTO14746 1132 aaKnown RBP9.54□□□□□ -0.88
PSMA3-205ENST00000554207 DHX9Q08211 1270 aaKnown RBP9.54□□□□□ -0.88
PSMA3-205ENST00000554207 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
PSMA3-205ENST00000554207 ITPKCQ96DU7 683 aa9.54□□□□□ -0.88
PSMA3-205ENST00000554207 ZFAND3Q9H8U3 227 aa9.54□□□□□ -0.88
PSMA3-205ENST00000554207 TMEM229AB2RXF0 380 aa9.53□□□□□ -0.88
PSMA3-205ENST00000554207 SCNN1AP37088 669 aa9.53□□□□□ -0.88
PSMA3-205ENST00000554207 SCNN1DP51172 638 aa9.53□□□□□ -0.88
PSMA3-205ENST00000554207 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
PSMA3-205ENST00000554207 BMP1P13497 986 aa9.52□□□□□ -0.89
PSMA3-205ENST00000554207 TRIM46Q7Z4K8 759 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms