RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
TDP1-209ENST00000554180 TATP17735 454 aaPredicted RBP9.99□□□□□ -0.81
TDP1-209ENST00000554180 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
TDP1-209ENST00000554180 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
TDP1-209ENST00000554180 LRP6O75581 1613 aa9.98□□□□□ -0.81
TDP1-209ENST00000554180 NUTM2BA6NNL0 878 aaPredicted RBP9.98□□□□□ -0.81
TDP1-209ENST00000554180 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
TDP1-209ENST00000554180 NUTM2EB1AL46 878 aaPredicted RBP9.98□□□□□ -0.81
TDP1-209ENST00000554180 LARP1Q6PKG0 1096 aaKnown RBP9.98□□□□□ -0.81
TDP1-209ENST00000554180 NUTM2AQ8IVF1 878 aaPredicted RBP9.98□□□□□ -0.81
TDP1-209ENST00000554180 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
TDP1-209ENST00000554180 CDCA7LQ96GN5 454 aa9.98□□□□□ -0.81
TDP1-209ENST00000554180 STRN4Q9NRL3 753 aa9.98□□□□□ -0.81
TDP1-209ENST00000554180 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
TDP1-209ENST00000554180 NRAPQ86VF7 1730 aa9.98□□□□□ -0.81
TDP1-209ENST00000554180 PKD1L3Q7Z443 1732 aa9.97□□□□□ -0.81
TDP1-209ENST00000554180 PARP4Q9UKK3 1724 aaKnown RBP9.97□□□□□ -0.81
TDP1-209ENST00000554180 IL2RBP14784 551 aa9.97□□□□□ -0.81
TDP1-209ENST00000554180 GNAI1P63096 354 aa9.97□□□□□ -0.81
TDP1-209ENST00000554180 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
TDP1-209ENST00000554180 ZNF530Q6P9A1 599 aaPredicted RBP9.97□□□□□ -0.81
TDP1-209ENST00000554180 FNBP4Q8N3X1 1017 aaPredicted RBP9.97□□□□□ -0.81
TDP1-209ENST00000554180 CDCA7Q9BWT1 371 aaPredicted RBP9.97□□□□□ -0.81
TDP1-209ENST00000554180 IFT57Q9NWB7 429 aa9.97□□□□□ -0.81
TDP1-209ENST00000554180 THRAP3Q9Y2W1 955 aaKnown RBP9.97□□□□□ -0.81
TDP1-209ENST00000554180 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
TDP1-209ENST00000554180 DISP2A7MBM2 1401 aa9.97□□□□□ -0.81
TDP1-209ENST00000554180 LRRC37A3O60309 1634 aa9.96□□□□□ -0.81
TDP1-209ENST00000554180 CT47B1P0C2W7 299 aaPredicted RBP9.96□□□□□ -0.82
TDP1-209ENST00000554180 C1orf141Q5JVX7 400 aa9.96□□□□□ -0.82
TDP1-209ENST00000554180 UNC5CLQ8IV45 518 aa9.96□□□□□ -0.82
TDP1-209ENST00000554180 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
TDP1-209ENST00000554180 SPINK5Q9NQ38 1064 aaPredicted RBP9.96□□□□□ -0.82
TDP1-209ENST00000554180 PCDH11XQ9BZA7 1347 aa9.96□□□□□ -0.82
TDP1-209ENST00000554180 PCDH11YQ9BZA8 1340 aa9.96□□□□□ -0.82
TDP1-209ENST00000554180 DLG5Q8TDM6 1919 aa9.95□□□□□ -0.82
TDP1-209ENST00000554180 ZNF853P0CG23 659 aa9.95□□□□□ -0.82
TDP1-209ENST00000554180 NGLY1Q96IV0 654 aa9.95□□□□□ -0.82
TDP1-209ENST00000554180 BABAM1Q9NWV8 329 aa9.95□□□□□ -0.82
TDP1-209ENST00000554180 SPATA31A1Q5TZJ5 1347 aa9.95□□□□□ -0.82
TDP1-209ENST00000554180 FANCIQ9NVI1 1328 aa9.95□□□□□ -0.82
TDP1-209ENST00000554180 BCL9LQ86UU0 1499 aa9.95□□□□□ -0.82
TDP1-209ENST00000554180 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.95□□□□□ -0.82
TDP1-209ENST00000554180 ADAMTS7Q9UKP4 1686 aa9.94□□□□□ -0.82
TDP1-209ENST00000554180 SPATA31A5Q5VU36 1347 aa9.94□□□□□ -0.82
TDP1-209ENST00000554180 SPATA31A7Q8IWB4 1347 aa9.94□□□□□ -0.82
TDP1-209ENST00000554180 HSP90AB1P08238 724 aaKnown RBP9.94□□□□□ -0.82
TDP1-209ENST00000554180 VPS72Q15906 364 aa9.94□□□□□ -0.82
TDP1-209ENST00000554180 MCM10Q7L590 875 aa9.94□□□□□ -0.82
TDP1-209ENST00000554180 IFNL2Q8IZJ0 200 aa9.94□□□□□ -0.82
TDP1-209ENST00000554180 C8orf37Q96NL8 207 aa9.94□□□□□ -0.82
TDP1-209ENST00000554180 CHL1O00533 1208 aa9.93□□□□□ -0.82
TDP1-209ENST00000554180 PHKG2P15735 406 aa9.93□□□□□ -0.82
TDP1-209ENST00000554180 DCTN1Q14203 1278 aa9.93□□□□□ -0.82
TDP1-209ENST00000554180 MEX3CQ5U5Q3 659 aaKnown RBP9.93□□□□□ -0.82
TDP1-209ENST00000554180 BARGINQ6ZT62 677 aa9.93□□□□□ -0.82
TDP1-209ENST00000554180 ZCRB1Q8TBF4 217 aaKnown RBP9.93□□□□□ -0.82
TDP1-209ENST00000554180 FBXO41Q8TF61 875 aa9.93□□□□□ -0.82
TDP1-209ENST00000554180 THUMPD2Q9BTF0 503 aaKnown RBP9.93□□□□□ -0.82
TDP1-209ENST00000554180 MRC1P22897 1456 aa9.92□□□□□ -0.82
TDP1-209ENST00000554180 TNS2Q63HR2 1409 aa9.92□□□□□ -0.82
TDP1-209ENST00000554180 CYP27B1O15528 508 aa9.92□□□□□ -0.82
TDP1-209ENST00000554180 RNMTO43148 476 aaKnown RBP9.92□□□□□ -0.82
TDP1-209ENST00000554180 IL17REQ8NFR9 667 aa9.92□□□□□ -0.82
TDP1-209ENST00000554180 ZNF428Q96B54 188 aa9.92□□□□□ -0.82
TDP1-209ENST00000554180 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
TDP1-209ENST00000554180 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
TDP1-209ENST00000554180 KDM6AO15550 1401 aaPredicted RBP9.91□□□□□ -0.82
TDP1-209ENST00000554180 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
TDP1-209ENST00000554180 RNF123Q5XPI4 1314 aa9.91□□□□□ -0.82
TDP1-209ENST00000554180 NKX1-1Q15270 411 aaPredicted RBP9.91□□□□□ -0.82
TDP1-209ENST00000554180 TAF7Q15545 349 aaPredicted RBP9.91□□□□□ -0.82
TDP1-209ENST00000554180 MBIPQ9NS73 344 aa9.91□□□□□ -0.82
TDP1-209ENST00000554180 USP35Q9P2H5 1018 aa9.91□□□□□ -0.82
TDP1-209ENST00000554180 USP21Q9UK80 565 aa9.91□□□□□ -0.82
TDP1-209ENST00000554180 AFF2P51816 1311 aa9.9□□□□□ -0.82
TDP1-209ENST00000554180 SOS1Q07889 1333 aaPredicted RBP9.9□□□□□ -0.82
TDP1-209ENST00000554180 TEFQ10587 303 aa9.9□□□□□ -0.82
TDP1-209ENST00000554180 MPRIPQ6WCQ1 1025 aa9.9□□□□□ -0.82
TDP1-209ENST00000554180 TSR2Q969E8 191 aaKnown RBP9.9□□□□□ -0.82
TDP1-209ENST00000554180 ATRNO75882 1429 aa9.9□□□□□ -0.83
TDP1-209ENST00000554180 EXOSC9Q06265 439 aaKnown RBP9.89□□□□□ -0.83
TDP1-209ENST00000554180 LGR6Q9HBX8 967 aa9.89□□□□□ -0.83
TDP1-209ENST00000554180 TSPYL4Q9UJ04 414 aa9.89□□□□□ -0.83
TDP1-209ENST00000554180 LAS1LQ9Y4W2 734 aaKnown RBP9.89□□□□□ -0.83
TDP1-209ENST00000554180 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
TDP1-209ENST00000554180 ERVV-2B6SEH9 535 aa9.88□□□□□ -0.83
TDP1-209ENST00000554180 EXOC5O00471 708 aa9.88□□□□□ -0.83
TDP1-209ENST00000554180 SLC52A2Q9HAB3 445 aa9.88□□□□□ -0.83
TDP1-209ENST00000554180 TRPC5Q9UL62 973 aaPredicted RBP9.88□□□□□ -0.83
TDP1-209ENST00000554180 CCDC9Q9Y3X0 531 aaKnown RBP9.88□□□□□ -0.83
TDP1-209ENST00000554180 SUPT16HQ9Y5B9 1047 aaKnown RBP9.88□□□□□ -0.83
TDP1-209ENST00000554180 NEFLP07196 543 aa9.87□□□□□ -0.83
TDP1-209ENST00000554180 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
TDP1-209ENST00000554180 RRP1P56182 461 aaKnown RBP9.87□□□□□ -0.83
TDP1-209ENST00000554180 DDB1Q16531 1140 aa9.87□□□□□ -0.83
TDP1-209ENST00000554180 ALDH1L2Q3SY69 923 aa9.87□□□□□ -0.83
TDP1-209ENST00000554180 SCN11AQ9UI33 1791 aa9.87□□□□□ -0.83
TDP1-209ENST00000554180 THSD7AQ9UPZ6 1657 aa9.87□□□□□ -0.83
TDP1-209ENST00000554180 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms