RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 TECPR2O15040 1411 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 MST1RQ04912 1400 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 MYO3AQ8NEV4 1616 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.3□□□□□ -1.88
PRPF39-205ENST00000554081 DIAPH1O60610 1272 aaKnown RBP3.3□□□□□ -1.88
PRPF39-205ENST00000554081 PLEKHO1Q53GL0 409 aaPredicted RBP3.3□□□□□ -1.88
PRPF39-205ENST00000554081 MCM10Q7L590 875 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 KRTAP3-3Q9BYR6 98 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 KRTAP3-2Q9BYR7 98 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 ARHGAP31Q2M1Z3 1444 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 INO80Q9ULG1 1556 aaPredicted RBP3.3□□□□□ -1.88
PRPF39-205ENST00000554081 ADGBQ8N7X0 1667 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 HOXC9P31274 260 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 ARHGEF25Q86VW2 580 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 ZNF408Q9H9D4 720 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 ANO8Q9HCE9 1232 aaPredicted RBP3.3□□□□□ -1.88
PRPF39-205ENST00000554081 RTCBQ9Y3I0 505 aaKnown RBP3.3□□□□□ -1.88
PRPF39-205ENST00000554081 ARHGEF5Q12774 1597 aa3.3□□□□□ -1.88
PRPF39-205ENST00000554081 SPATA31A1Q5TZJ5 1347 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 ANP32CO43423 234 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 ATXN8OSP0DMR3 200 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 PRKAR2BP31323 418 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 JARID2Q92833 1246 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-205ENST00000554081 EYA1Q99502 592 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 MRS2Q9HD23 443 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 MAST1Q9Y2H9 1570 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 PIK3R4Q99570 1358 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 SPATA31A5Q5VU36 1347 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 SPATA31A7Q8IWB4 1347 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 A0A0G2JLW4 131 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 C11orf95C9JLR9 678 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-205ENST00000554081 MMP10P09238 476 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 ATN1P54259 1190 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-205ENST00000554081 EAPPQ56P03 285 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-205ENST00000554081 TRAPPC3LQ5T215 181 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 IFNL2Q8IZJ0 200 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 GPBP1L1Q9HC44 474 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-205ENST00000554081 CREBZFQ9NS37 354 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 STRCQ7RTU9 1775 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 CEP290O15078 2479 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 WDR17Q8IZU2 1322 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 PLEKHG3A1L390 1219 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 PLIN1O60240 522 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 RBM26Q5T8P6 1007 aaKnown RBP3.29□□□□□ -1.88
PRPF39-205ENST00000554081 IP6K1Q92551 441 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 SIRT1Q96EB6 747 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 MS4A3Q96HJ5 214 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 ZBTB3Q9H5J0 574 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 SRP68Q9UHB9 627 aaKnown RBP3.29□□□□□ -1.88
PRPF39-205ENST00000554081 PARP3Q9Y6F1 533 aa3.29□□□□□ -1.88
PRPF39-205ENST00000554081 IQGAP1P46940 1657 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 ZFYVE9O95405 1425 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 TNS3Q68CZ2 1445 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 SMG6Q86US8 1419 aaKnown RBP3.28□□□□□ -1.88
PRPF39-205ENST00000554081 LTBP4Q8N2S1 1624 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 SLC15A2Q16348 729 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 SLC4A10Q6U841 1118 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 DNAJC10Q8IXB1 793 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 STAC3Q96MF2 364 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 CARD10Q9BWT7 1032 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 LGR6Q9HBX8 967 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 GJA3Q9Y6H8 435 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 RPRD2Q5VT52 1461 aaKnown RBP3.28□□□□□ -1.88
PRPF39-205ENST00000554081 NSD3Q9BZ95 1437 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 ADGRB3O60242 1522 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 TRPM2O94759 1503 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 MAP3K1Q13233 1512 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 LOC102724428A0A0B4J2F2 783 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 TIE1P35590 1138 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 PTGER2P43116 358 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 SIK1P57059 783 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 CCDC125Q86Z20 511 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 SLAIN1Q8ND83 568 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 SYT17Q9BSW7 474 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 CARD14Q9BXL6 1004 aa3.28□□□□□ -1.88
PRPF39-205ENST00000554081 MED1Q15648 1581 aaPredicted RBP3.28□□□□□ -1.88
PRPF39-205ENST00000554081 LRP6O75581 1613 aa3.28□□□□□ -1.89
PRPF39-205ENST00000554081 ERBB3P21860 1342 aa3.28□□□□□ -1.89
PRPF39-205ENST00000554081 ROBO1Q9Y6N7 1651 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 SYNMO15061 1565 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 A0A1W2PP64 1363 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 BTBD11A6QL63 1104 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 FRAT2O75474 233 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-205ENST00000554081 A1BGP04217 495 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 HTRA3P83110 453 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 EIF4A2Q14240 407 aaKnown RBP3.27□□□□□ -1.89
PRPF39-205ENST00000554081 ADGRL2O95490 1459 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 CHRNA5P30532 468 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 NLGN2Q8NFZ4 835 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 PIGBQ92521 554 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 POLKQ9UBT6 870 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 TSPYL4Q9UJ04 414 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 RGS12O14924 1447 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 RALGAPBQ86X10 1494 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 BRD4O60885 1362 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-205ENST00000554081 ALKQ9UM73 1620 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 MYCP01106 439 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-205ENST00000554081 RIPK4P57078 832 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 BCL2L13Q9BXK5 485 aa3.27□□□□□ -1.89
PRPF39-205ENST00000554081 LRRC4BQ9NT99 713 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms