RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 APLP1P51693 650 aa9.44□□□□□ -0.9
GPHN-206ENST00000553936 FLAD1Q8NFF5 587 aa9.44□□□□□ -0.9
GPHN-206ENST00000553936 DDX54Q8TDD1 881 aaKnown RBP9.44□□□□□ -0.9
GPHN-206ENST00000553936 ANKRD24Q8TF21 1146 aa9.44□□□□□ -0.9
GPHN-206ENST00000553936 ZNF526Q8TF50 670 aaPredicted RBP9.44□□□□□ -0.9
GPHN-206ENST00000553936 CCNL1Q9UK58 526 aaPredicted RBP9.44□□□□□ -0.9
GPHN-206ENST00000553936 COL24A1Q17RW2 1714 aa9.44□□□□□ -0.9
GPHN-206ENST00000553936 ANKRD36BQ8N2N9 1353 aa9.43□□□□□ -0.9
GPHN-206ENST00000553936 CEP350Q5VT06 3117 aa9.42□□□□□ -0.9
GPHN-206ENST00000553936 ADCY9O60503 1353 aa9.42□□□□□ -0.9
GPHN-206ENST00000553936 USP31Q70CQ4 1352 aa9.42□□□□□ -0.9
GPHN-206ENST00000553936 USP47Q96K76 1375 aa9.42□□□□□ -0.9
GPHN-206ENST00000553936 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
GPHN-206ENST00000553936 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
GPHN-206ENST00000553936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.95e-6■■■■□ 20.3
GPHN-206ENST00000553936 GOLGB1Q14789 3259 aaKnown RBP9.41□□□□□ -0.9
GPHN-206ENST00000553936 KAT6BQ8WYB5 2073 aa9.4□□□□□ -0.9
GPHN-206ENST00000553936 KCNQ4P56696 695 aa9.4□□□□□ -0.9
GPHN-206ENST00000553936 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
GPHN-206ENST00000553936 HDGFL2Q7Z4V5 671 aaPredicted RBP9.4□□□□□ -0.9
GPHN-206ENST00000553936 TOMM70O94826 608 aa9.39□□□□□ -0.91
GPHN-206ENST00000553936 KIF3CO14782 793 aa9.38□□□□□ -0.91
GPHN-206ENST00000553936 NME9Q86XW9 330 aa9.38□□□□□ -0.91
GPHN-206ENST00000553936 ZCRB1Q8TBF4 217 aaKnown RBP9.38□□□□□ -0.91
GPHN-206ENST00000553936 IP6K1Q92551 441 aa9.38□□□□□ -0.91
GPHN-206ENST00000553936 NSD3Q9BZ95 1437 aa9.38□□□□□ -0.91
GPHN-206ENST00000553936 ROCK2O75116 1388 aaKnown RBP9.37□□□□□ -0.91
GPHN-206ENST00000553936 LTN1O94822 1766 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 CGNL1Q0VF96 1302 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 IGSF1Q8N6C5 1336 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 LY75O60449 1722 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 FAM208AQ9UK61 1670 aaKnown RBP9.37□□□□□ -0.91
GPHN-206ENST00000553936 TMC1Q8TDI8 760 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 LTV1Q96GA3 475 aaPredicted RBP9.37□□□□□ -0.91
GPHN-206ENST00000553936 AK7Q96M32 723 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 TERF2IPQ9NYB0 399 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 TUBGCP6Q96RT7 1819 aa9.37□□□□□ -0.91
GPHN-206ENST00000553936 USP54Q70EL1 1684 aa9.36□□□□□ -0.91
GPHN-206ENST00000553936 C16orf71Q8IYS4 520 aaPredicted RBP9.36□□□□□ -0.91
GPHN-206ENST00000553936 EDC4Q6P2E9 1401 aaKnown RBP9.36□□□□□ -0.91
GPHN-206ENST00000553936 MON2Q7Z3U7 1717 aa9.36□□□□□ -0.91
GPHN-206ENST00000553936 DOT1LQ8TEK3 1739 aa9.36□□□□□ -0.91
GPHN-206ENST00000553936 NSD2O96028 1365 aa9.36□□□□□ -0.91
GPHN-206ENST00000553936 AMPHP49418 695 aa9.35□□□□□ -0.91
GPHN-206ENST00000553936 SAMD1Q6SPF0 538 aaPredicted RBP9.35□□□□□ -0.91
GPHN-206ENST00000553936 RAPGEF4Q8WZA2 1011 aa9.35□□□□□ -0.91
GPHN-206ENST00000553936 SMARCC1Q92922 1105 aaPredicted RBP9.35□□□□□ -0.91
GPHN-206ENST00000553936 SBNO2Q9Y2G9 1366 aa9.35□□□□□ -0.91
GPHN-206ENST00000553936 COG3Q96JB2 828 aa9.34□□□□□ -0.91
GPHN-206ENST00000553936 SPINK5Q9NQ38 1064 aaPredicted RBP9.34□□□□□ -0.91
GPHN-206ENST00000553936 PALLDQ8WX93 1383 aa9.34□□□□□ -0.91
GPHN-206ENST00000553936 SMG6Q86US8 1419 aaKnown RBP9.33□□□□□ -0.92
GPHN-206ENST00000553936 SSFA2P28290 1259 aa9.33□□□□□ -0.92
GPHN-206ENST00000553936 HOXC9P31274 260 aa9.33□□□□□ -0.92
GPHN-206ENST00000553936 DNAJC5GQ8N7S2 189 aa9.33□□□□□ -0.92
GPHN-206ENST00000553936 WWC3Q9ULE0 1092 aa9.33□□□□□ -0.92
GPHN-206ENST00000553936 C5P01031 1676 aa9.32□□□□□ -0.92
GPHN-206ENST00000553936 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
GPHN-206ENST00000553936 PCDH11YQ9BZA8 1340 aa9.32□□□□□ -0.92
GPHN-206ENST00000553936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
GPHN-206ENST00000553936 PHF14O94880 888 aa9.32□□□□□ -0.92
GPHN-206ENST00000553936 TATP17735 454 aaPredicted RBP9.32□□□□□ -0.92
GPHN-206ENST00000553936 TNS4Q8IZW8 715 aa9.32□□□□□ -0.92
GPHN-206ENST00000553936 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
GPHN-206ENST00000553936 L3MBTL2Q969R5 705 aa9.32□□□□□ -0.92
GPHN-206ENST00000553936 KLRG1Q96E93 195 aa9.32□□□□□ -0.92
GPHN-206ENST00000553936 CAPN15O75808 1086 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 PRELPP51888 382 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 TGFB2P61812 414 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 FSTL1Q12841 308 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 MPRIPQ6WCQ1 1025 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 SLC12A5Q9H2X9 1139 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 RTL1A6NKG5 1358 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 CICQ96RK0 1608 aaPredicted RBP9.31□□□□□ -0.92
GPHN-206ENST00000553936 MEGF6O75095 1541 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 MAP3K19Q56UN5 1328 aa9.31□□□□□ -0.92
GPHN-206ENST00000553936 CD163L1Q9NR16 1453 aa9.3□□□□□ -0.92
GPHN-206ENST00000553936 PLEKHG2Q9H7P9 1386 aa9.3□□□□□ -0.92
GPHN-206ENST00000553936 ATXN8OSP0DMR3 200 aa9.3□□□□□ -0.92
GPHN-206ENST00000553936 COL13A1Q5TAT6 717 aaPredicted RBP9.3□□□□□ -0.92
GPHN-206ENST00000553936 JMYQ8N9B5 988 aa9.3□□□□□ -0.92
GPHN-206ENST00000553936 PUS7Q96PZ0 661 aaKnown RBP9.3□□□□□ -0.92
GPHN-206ENST00000553936 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
GPHN-206ENST00000553936 A0A1W2PP64 1363 aa9.29□□□□□ -0.92
GPHN-206ENST00000553936 C4BP0C0L5 1744 aa9.29□□□□□ -0.92
GPHN-206ENST00000553936 SLC24A1O60721 1099 aa9.29□□□□□ -0.92
GPHN-206ENST00000553936 ARHGAP27Q6ZUM4 889 aa9.29□□□□□ -0.92
GPHN-206ENST00000553936 KDM2BQ8NHM5 1336 aa9.29□□□□□ -0.92
GPHN-206ENST00000553936 NBPF6Q5VWK0 638 aa9.28□□□□□ -0.92
GPHN-206ENST00000553936 NBPF4Q96M43 638 aa9.28□□□□□ -0.92
GPHN-206ENST00000553936 NMRK2Q9NPI5 230 aa9.28□□□□□ -0.92
GPHN-206ENST00000553936 WDR90Q96KV7 1748 aa9.28□□□□□ -0.92
GPHN-206ENST00000553936 LOC102724428A0A0B4J2F2 783 aa9.27□□□□□ -0.93
GPHN-206ENST00000553936 GNPATO15228 680 aa9.27□□□□□ -0.93
GPHN-206ENST00000553936 MMP10P09238 476 aa9.27□□□□□ -0.93
GPHN-206ENST00000553936 SIK1P57059 783 aa9.27□□□□□ -0.93
GPHN-206ENST00000553936 NLGN1Q8N2Q7 840 aa9.27□□□□□ -0.93
GPHN-206ENST00000553936 CARD11Q9BXL7 1154 aa9.27□□□□□ -0.93
GPHN-206ENST00000553936 CCDC87Q9NVE4 849 aa9.27□□□□□ -0.93
GPHN-206ENST00000553936 TAF1LQ8IZX4 1826 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 254.7 ms