RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
PCNX4-207ENST00000553898 MSH5O43196 834 aa13.18□□□□□ -0.3
PCNX4-207ENST00000553898 NEFMP07197 916 aa13.18□□□□□ -0.3
PCNX4-207ENST00000553898 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
PCNX4-207ENST00000553898 CCDC125Q86Z20 511 aa13.18□□□□□ -0.3
PCNX4-207ENST00000553898 TNS1Q9HBL0 1735 aaKnown RBP13.18□□□□□ -0.3
PCNX4-207ENST00000553898 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
PCNX4-207ENST00000553898 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
PCNX4-207ENST00000553898 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
PCNX4-207ENST00000553898 IL13P35225 146 aa13.17□□□□□ -0.3
PCNX4-207ENST00000553898 MEGF6O75095 1541 aa13.17□□□□□ -0.3
PCNX4-207ENST00000553898 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
PCNX4-207ENST00000553898 TRIM37O94972 964 aa13.16□□□□□ -0.3
PCNX4-207ENST00000553898 HMOX1P09601 288 aa13.16□□□□□ -0.3
PCNX4-207ENST00000553898 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-207ENST00000553898 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCNX4-207ENST00000553898 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-207ENST00000553898 BAG6P46379 1132 aa13.15□□□□□ -0.3
PCNX4-207ENST00000553898 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
PCNX4-207ENST00000553898 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-207ENST00000553898 SYTL4Q96C24 671 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-207ENST00000553898 AMOTQ4VCS5 1084 aa13.14□□□□□ -0.31
PCNX4-207ENST00000553898 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
PCNX4-207ENST00000553898 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCNX4-207ENST00000553898 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
PCNX4-207ENST00000553898 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
PCNX4-207ENST00000553898 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
PCNX4-207ENST00000553898 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
PCNX4-207ENST00000553898 APBA3O96018 575 aa13.12□□□□□ -0.31
PCNX4-207ENST00000553898 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
PCNX4-207ENST00000553898 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
PCNX4-207ENST00000553898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCNX4-207ENST00000553898 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
PCNX4-207ENST00000553898 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
PCNX4-207ENST00000553898 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
PCNX4-207ENST00000553898 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
PCNX4-207ENST00000553898 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
PCNX4-207ENST00000553898 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
PCNX4-207ENST00000553898 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
PCNX4-207ENST00000553898 KDRP35968 1356 aa13.09□□□□□ -0.31
PCNX4-207ENST00000553898 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
PCNX4-207ENST00000553898 PRKAR2BP31323 418 aa13.08□□□□□ -0.32
PCNX4-207ENST00000553898 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
PCNX4-207ENST00000553898 BCL9O00512 1426 aa13.07□□□□□ -0.32
PCNX4-207ENST00000553898 CYP27B1O15528 508 aa13.07□□□□□ -0.32
PCNX4-207ENST00000553898 FCHSD2O94868 740 aa13.07□□□□□ -0.32
PCNX4-207ENST00000553898 PHKG2P15735 406 aa13.07□□□□□ -0.32
PCNX4-207ENST00000553898 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
PCNX4-207ENST00000553898 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
PCNX4-207ENST00000553898 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
PCNX4-207ENST00000553898 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
PCNX4-207ENST00000553898 NHSQ6T4R5 1651 aa13.06□□□□□ -0.32
PCNX4-207ENST00000553898 RREB1Q92766 1687 aa13.06□□□□□ -0.32
PCNX4-207ENST00000553898 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
PCNX4-207ENST00000553898 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
PCNX4-207ENST00000553898 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
PCNX4-207ENST00000553898 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
PCNX4-207ENST00000553898 KCNQ2O43526 872 aa13.05□□□□□ -0.32
PCNX4-207ENST00000553898 CABP4P57796 275 aa13.05□□□□□ -0.32
PCNX4-207ENST00000553898 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
PCNX4-207ENST00000553898 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
PCNX4-207ENST00000553898 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
PCNX4-207ENST00000553898 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
PCNX4-207ENST00000553898 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
PCNX4-207ENST00000553898 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
PCNX4-207ENST00000553898 NUP188Q5SRE5 1749 aa13.03□□□□□ -0.32
PCNX4-207ENST00000553898 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
PCNX4-207ENST00000553898 BTAF1O14981 1849 aa13.02□□□□□ -0.32
PCNX4-207ENST00000553898 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
PCNX4-207ENST00000553898 TEFQ10587 303 aa13.02□□□□□ -0.33
PCNX4-207ENST00000553898 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.33
PCNX4-207ENST00000553898 EZH2Q15910 746 aaKnown RBP13.02□□□□□ -0.33
PCNX4-207ENST00000553898 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
PCNX4-207ENST00000553898 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
PCNX4-207ENST00000553898 ERVV-2B6SEH9 535 aa13.01□□□□□ -0.33
PCNX4-207ENST00000553898 PLSCR1O15162 318 aa13.01□□□□□ -0.33
PCNX4-207ENST00000553898 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
PCNX4-207ENST00000553898 DIEXFQ68CQ4 756 aaKnown RBP13.01□□□□□ -0.33
PCNX4-207ENST00000553898 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
PCNX4-207ENST00000553898 PTF1AQ7RTS3 328 aa13□□□□□ -0.33
PCNX4-207ENST00000553898 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
PCNX4-207ENST00000553898 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
PCNX4-207ENST00000553898 ITGB4P16144 1822 aa12.99□□□□□ -0.33
PCNX4-207ENST00000553898 RNMTO43148 476 aaKnown RBP12.98□□□□□ -0.33
PCNX4-207ENST00000553898 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 PIGBQ92521 554 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 CAMKK2Q96RR4 588 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
PCNX4-207ENST00000553898 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 TOGARAM1Q9Y4F4 1720 aa12.98□□□□□ -0.33
PCNX4-207ENST00000553898 PALLDQ8WX93 1383 aa12.97□□□□□ -0.33
PCNX4-207ENST00000553898 NEUROD2Q15784 382 aa12.97□□□□□ -0.33
PCNX4-207ENST00000553898 NFE2L2Q16236 605 aa12.97□□□□□ -0.33
PCNX4-207ENST00000553898 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
PCNX4-207ENST00000553898 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
PCNX4-207ENST00000553898 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
PCNX4-207ENST00000553898 SCN11AQ9UI33 1791 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms