RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 UTRNP46939 3433 aa24.93■■□□□ 1.58
SYNE2-211ENST00000553801 TESK2Q96S53 571 aa24.93■■□□□ 1.58
SYNE2-211ENST00000553801 ST20-MTHFSA0A0A6YYL1 179 aa24.92■■□□□ 1.58
SYNE2-211ENST00000553801 KCNQ4P56696 695 aa24.92■■□□□ 1.58
SYNE2-211ENST00000553801 C1QTNF8P60827 252 aa24.91■■□□□ 1.58
SYNE2-211ENST00000553801 CCNL1Q9UK58 526 aaPredicted RBP24.91■■□□□ 1.58
SYNE2-211ENST00000553801 CGNL1Q0VF96 1302 aa24.9■■□□□ 1.58
SYNE2-211ENST00000553801 COL24A1Q17RW2 1714 aa24.9■■□□□ 1.58
SYNE2-211ENST00000553801 FBLN1P23142 703 aa24.9■■□□□ 1.58
SYNE2-211ENST00000553801 PELP1Q8IZL8 1130 aaKnown RBP24.9■■□□□ 1.58
SYNE2-211ENST00000553801 RTL1A6NKG5 1358 aa24.9■■□□□ 1.58
SYNE2-211ENST00000553801 DOT1LQ8TEK3 1739 aa24.89■■□□□ 1.58
SYNE2-211ENST00000553801 HMGB2P26583 209 aaKnown RBP24.89■■□□□ 1.58
SYNE2-211ENST00000553801 NSD2O96028 1365 aa24.89■■□□□ 1.57
SYNE2-211ENST00000553801 LY75O60449 1722 aa24.89■■□□□ 1.57
SYNE2-211ENST00000553801 SENP3-EIF4A1A0A087X0R7 540 aa24.88■■□□□ 1.57
SYNE2-211ENST00000553801 USP47Q96K76 1375 aa24.88■■□□□ 1.57
SYNE2-211ENST00000553801 RAPGEF4Q8WZA2 1011 aa24.87■■□□□ 1.57
SYNE2-211ENST00000553801 RGPD2P0DJD1 1756 aa24.87■■□□□ 1.57
SYNE2-211ENST00000553801 MEGF6O75095 1541 aa24.86■■□□□ 1.57
SYNE2-211ENST00000553801 TUBGCP6Q96RT7 1819 aa24.86■■□□□ 1.57
SYNE2-211ENST00000553801 MSH5O43196 834 aa24.86■■□□□ 1.57
SYNE2-211ENST00000553801 NBPF6Q5VWK0 638 aa24.86■■□□□ 1.57
SYNE2-211ENST00000553801 NBPF4Q96M43 638 aa24.86■■□□□ 1.57
SYNE2-211ENST00000553801 SMG6Q86US8 1419 aaKnown RBP24.86■■□□□ 1.57
SYNE2-211ENST00000553801 RRS1Q15050 365 aaKnown RBP24.85■■□□□ 1.57
SYNE2-211ENST00000553801 SHANK3Q9BYB0 1731 aa24.84■■□□□ 1.57
SYNE2-211ENST00000553801 TATP17735 454 aaPredicted RBP24.84■■□□□ 1.57
SYNE2-211ENST00000553801 FYB1O15117 783 aa24.83■■□□□ 1.57
SYNE2-211ENST00000553801 GRIN3BO60391 1043 aa24.83■■□□□ 1.57
SYNE2-211ENST00000553801 NLGN2Q8NFZ4 835 aa24.83■■□□□ 1.57
SYNE2-211ENST00000553801 GIGYF1O75420 1035 aaPredicted RBP24.82■■□□□ 1.56
SYNE2-211ENST00000553801 COL23A1Q86Y22 540 aaPredicted RBP24.82■■□□□ 1.56
SYNE2-211ENST00000553801 GGNBP2Q9H3C7 697 aa24.82■■□□□ 1.56
SYNE2-211ENST00000553801 TMF1P82094 1093 aa24.81■■□□□ 1.56
SYNE2-211ENST00000553801 USHBP1Q8N6Y0 703 aa24.81■■□□□ 1.56
SYNE2-211ENST00000553801 FLAD1Q8NFF5 587 aa24.8■■□□□ 1.56
SYNE2-211ENST00000553801 PCDH11XQ9BZA7 1347 aa24.79■■□□□ 1.56
SYNE2-211ENST00000553801 PCDH11YQ9BZA8 1340 aa24.79■■□□□ 1.56
SYNE2-211ENST00000553801 INSRP06213 1382 aa24.78■■□□□ 1.56
SYNE2-211ENST00000553801 CDCA8Q53HL2 280 aa24.76■■□□□ 1.55
SYNE2-211ENST00000553801 KIF24Q5T7B8 1368 aa24.76■■□□□ 1.55
SYNE2-211ENST00000553801 YBX3P16989 372 aaKnown RBP eCLIP24.75■■□□□ 1.55
SYNE2-211ENST00000553801 HSP90AB2PQ58FF8 381 aa24.75■■□□□ 1.55
SYNE2-211ENST00000553801 MSL1Q68DK7 614 aa24.75■■□□□ 1.55
SYNE2-211ENST00000553801 FLT4P35916 1363 aa24.75■■□□□ 1.55
SYNE2-211ENST00000553801 MPRIPQ6WCQ1 1025 aa24.74■■□□□ 1.55
SYNE2-211ENST00000553801 SMARCC1Q92922 1105 aaPredicted RBP24.74■■□□□ 1.55
SYNE2-211ENST00000553801 CD2APQ9Y5K6 639 aa24.74■■□□□ 1.55
SYNE2-211ENST00000553801 PALLDQ8WX93 1383 aa24.73■■□□□ 1.55
SYNE2-211ENST00000553801 C5P01031 1676 aa24.72■■□□□ 1.55
SYNE2-211ENST00000553801 CYP27B1O15528 508 aa24.69■■□□□ 1.54
SYNE2-211ENST00000553801 AK7Q96M32 723 aa24.69■■□□□ 1.54
SYNE2-211ENST00000553801 KIF20BQ96Q89 1820 aa24.68■■□□□ 1.54
SYNE2-211ENST00000553801 TAF1LQ8IZX4 1826 aa24.68■■□□□ 1.54
SYNE2-211ENST00000553801 GOLGB1Q14789 3259 aaKnown RBP24.65■■□□□ 1.54
SYNE2-211ENST00000553801 NSD3Q9BZ95 1437 aa24.65■■□□□ 1.54
SYNE2-211ENST00000553801 SPG7Q9UQ90 795 aa24.65■■□□□ 1.54
SYNE2-211ENST00000553801 NKX1-1Q15270 411 aaPredicted RBP24.64■■□□□ 1.54
SYNE2-211ENST00000553801 PIGBQ92521 554 aa24.64■■□□□ 1.54
SYNE2-211ENST00000553801 EMILIN1Q9Y6C2 1016 aa24.64■■□□□ 1.54
SYNE2-211ENST00000553801 ITGB4P16144 1822 aa24.63■■□□□ 1.53
SYNE2-211ENST00000553801 C4BP0C0L5 1744 aa24.63■■□□□ 1.53
SYNE2-211ENST00000553801 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
SYNE2-211ENST00000553801 ATP10DQ9P241 1426 aa24.61■■□□□ 1.53
SYNE2-211ENST00000553801 CARD14Q9BXL6 1004 aa24.61■■□□□ 1.53
SYNE2-211ENST00000553801 PKD1L3Q7Z443 1732 aa24.61■■□□□ 1.53
SYNE2-211ENST00000553801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.6■■□□□ 1.53
SYNE2-211ENST00000553801 PHF14O94880 888 aa24.6■■□□□ 1.53
SYNE2-211ENST00000553801 SSFA2P28290 1259 aa24.6■■□□□ 1.53
SYNE2-211ENST00000553801 GPBP1L1Q9HC44 474 aaPredicted RBP24.6■■□□□ 1.53
SYNE2-211ENST00000553801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.6■■□□□ 1.53
SYNE2-211ENST00000553801 TOGARAM1Q9Y4F4 1720 aa24.6■■□□□ 1.53
SYNE2-211ENST00000553801 LOC102724428A0A0B4J2F2 783 aa24.59■■□□□ 1.53
SYNE2-211ENST00000553801 SIK1P57059 783 aa24.59■■□□□ 1.53
SYNE2-211ENST00000553801 TMOD3Q9NYL9 352 aa24.59■■□□□ 1.53
SYNE2-211ENST00000553801 NCAPD2Q15021 1401 aa24.59■■□□□ 1.53
SYNE2-211ENST00000553801 WASHC2AQ641Q2 1341 aa24.59■■□□□ 1.53
SYNE2-211ENST00000553801 UBR3Q6ZT12 1888 aa24.58■■□□□ 1.52
SYNE2-211ENST00000553801 IGSF1Q8N6C5 1336 aa24.57■■□□□ 1.52
SYNE2-211ENST00000553801 AMIGO3Q86WK7 504 aa24.56■■□□□ 1.52
SYNE2-211ENST00000553801 IFNL2Q8IZJ0 200 aa24.55■■□□□ 1.52
SYNE2-211ENST00000553801 LINC00116Q8NCU8 138 aa24.55■■□□□ 1.52
SYNE2-211ENST00000553801 EYA1Q99502 592 aa24.55■■□□□ 1.52
SYNE2-211ENST00000553801 ATP6V1AP38606 617 aa24.53■■□□□ 1.52
SYNE2-211ENST00000553801 SMIM5Q71RC9 77 aa24.53■■□□□ 1.52
SYNE2-211ENST00000553801 MAP2P11137 1827 aaKnown RBP24.53■■□□□ 1.52
SYNE2-211ENST00000553801 ADCY9O60503 1353 aa24.53■■□□□ 1.52
SYNE2-211ENST00000553801 GNPATO15228 680 aa24.52■■□□□ 1.52
SYNE2-211ENST00000553801 PHKG2P15735 406 aa24.52■■□□□ 1.52
SYNE2-211ENST00000553801 ASAP1Q9ULH1 1129 aa24.52■■□□□ 1.52
SYNE2-211ENST00000553801 ANKRD26Q9UPS8 1709 aa24.5■■□□□ 1.51
SYNE2-211ENST00000553801 ITPK1Q13572 414 aa24.5■■□□□ 1.51
SYNE2-211ENST00000553801 ZNF526Q8TF50 670 aaPredicted RBP24.5■■□□□ 1.51
SYNE2-211ENST00000553801 POLKQ9UBT6 870 aa24.5■■□□□ 1.51
SYNE2-211ENST00000553801 WWC3Q9ULE0 1092 aa24.49■■□□□ 1.51
SYNE2-211ENST00000553801 ATG3Q9NT62 314 aa24.48■■□□□ 1.51
SYNE2-211ENST00000553801 PLEKHG2Q9H7P9 1386 aa24.47■■□□□ 1.51
SYNE2-211ENST00000553801 HSPA6P17066 643 aa24.47■■□□□ 1.51
SYNE2-211ENST00000553801 IFFO2Q5TF58 517 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms