RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 ZCRB1Q8TBF4 217 aaKnown RBP13.81□□□□□ -0.2
ACTN1-210ENST00000553779 RAPGEF4Q8WZA2 1011 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 ARXQ96QS3 562 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 TESK2Q96S53 571 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 TFCP2L1Q9NZI6 479 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 C5P01031 1676 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 MEGF6O75095 1541 aa13.8□□□□□ -0.2
ACTN1-210ENST00000553779 MSH5O43196 834 aa13.8□□□□□ -0.2
ACTN1-210ENST00000553779 RRS1Q15050 365 aaKnown RBP13.8□□□□□ -0.2
ACTN1-210ENST00000553779 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
ACTN1-210ENST00000553779 GGNBP2Q9H3C7 697 aa13.8□□□□□ -0.2
ACTN1-210ENST00000553779 TAF1LQ8IZX4 1826 aa13.79□□□□□ -0.2
ACTN1-210ENST00000553779 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
ACTN1-210ENST00000553779 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
ACTN1-210ENST00000553779 USHBP1Q8N6Y0 703 aa13.79□□□□□ -0.2
ACTN1-210ENST00000553779 SYT17Q9BSW7 474 aa13.79□□□□□ -0.2
ACTN1-210ENST00000553779 TATP17735 454 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-210ENST00000553779 FBLN1P23142 703 aa13.78□□□□□ -0.2
ACTN1-210ENST00000553779 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-210ENST00000553779 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
ACTN1-210ENST00000553779 GPR162Q16538 588 aa13.77□□□□□ -0.21
ACTN1-210ENST00000553779 LRRC4BQ9NT99 713 aa13.77□□□□□ -0.21
ACTN1-210ENST00000553779 CCNL1Q9UK58 526 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-210ENST00000553779 FLT4P35916 1363 aa13.76□□□□□ -0.21
ACTN1-210ENST00000553779 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
ACTN1-210ENST00000553779 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
ACTN1-210ENST00000553779 KCNQ4P56696 695 aa13.76□□□□□ -0.21
ACTN1-210ENST00000553779 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
ACTN1-210ENST00000553779 UTRNP46939 3433 aa13.76□□□□□ -0.21
ACTN1-210ENST00000553779 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
ACTN1-210ENST00000553779 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-210ENST00000553779 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
ACTN1-210ENST00000553779 COL24A1Q17RW2 1714 aa13.75□□□□□ -0.21
ACTN1-210ENST00000553779 PKD1L3Q7Z443 1732 aa13.75□□□□□ -0.21
ACTN1-210ENST00000553779 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
ACTN1-210ENST00000553779 FYB1O15117 783 aa13.74□□□□□ -0.21
ACTN1-210ENST00000553779 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
ACTN1-210ENST00000553779 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
ACTN1-210ENST00000553779 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
ACTN1-210ENST00000553779 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
ACTN1-210ENST00000553779 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
ACTN1-210ENST00000553779 GOLGB1Q14789 3259 aaKnown RBP13.73□□□□□ -0.21
ACTN1-210ENST00000553779 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
ACTN1-210ENST00000553779 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
ACTN1-210ENST00000553779 INSRP06213 1382 aa13.72□□□□□ -0.21
ACTN1-210ENST00000553779 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
ACTN1-210ENST00000553779 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
ACTN1-210ENST00000553779 NSD2O96028 1365 aa13.71□□□□□ -0.21
ACTN1-210ENST00000553779 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
ACTN1-210ENST00000553779 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
ACTN1-210ENST00000553779 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
ACTN1-210ENST00000553779 MPRIPQ6WCQ1 1025 aa13.7□□□□□ -0.22
ACTN1-210ENST00000553779 ZNF784Q8NCA9 323 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-210ENST00000553779 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
ACTN1-210ENST00000553779 MSL1Q68DK7 614 aa13.69□□□□□ -0.22
ACTN1-210ENST00000553779 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
ACTN1-210ENST00000553779 EMILIN1Q9Y6C2 1016 aa13.69□□□□□ -0.22
ACTN1-210ENST00000553779 AK7Q96M32 723 aa13.68□□□□□ -0.22
ACTN1-210ENST00000553779 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
ACTN1-210ENST00000553779 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-210ENST00000553779 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
ACTN1-210ENST00000553779 PHF14O94880 888 aa13.65□□□□□ -0.22
ACTN1-210ENST00000553779 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-210ENST00000553779 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-210ENST00000553779 NLGN2Q8NFZ4 835 aa13.65□□□□□ -0.22
ACTN1-210ENST00000553779 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
ACTN1-210ENST00000553779 TMOD3Q9NYL9 352 aa13.64□□□□□ -0.23
ACTN1-210ENST00000553779 SENP3-EIF4A1A0A087X0R7 540 aa13.63□□□□□ -0.23
ACTN1-210ENST00000553779 CYP27B1O15528 508 aa13.63□□□□□ -0.23
ACTN1-210ENST00000553779 GRIN3BO60391 1043 aa13.63□□□□□ -0.23
ACTN1-210ENST00000553779 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-210ENST00000553779 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
ACTN1-210ENST00000553779 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
ACTN1-210ENST00000553779 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
ACTN1-210ENST00000553779 IFNL2Q8IZJ0 200 aa13.6□□□□□ -0.23
ACTN1-210ENST00000553779 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
ACTN1-210ENST00000553779 NCAPD2Q15021 1401 aa13.59□□□□□ -0.23
ACTN1-210ENST00000553779 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.23
ACTN1-210ENST00000553779 PIGBQ92521 554 aa13.59□□□□□ -0.23
ACTN1-210ENST00000553779 EYA1Q99502 592 aa13.59□□□□□ -0.23
ACTN1-210ENST00000553779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
ACTN1-210ENST00000553779 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
ACTN1-210ENST00000553779 GNPATO15228 680 aa13.58□□□□□ -0.24
ACTN1-210ENST00000553779 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
ACTN1-210ENST00000553779 SIK1P57059 783 aa13.58□□□□□ -0.24
ACTN1-210ENST00000553779 C1QTNF8P60827 252 aa13.58□□□□□ -0.24
ACTN1-210ENST00000553779 CD2APQ9Y5K6 639 aa13.58□□□□□ -0.24
ACTN1-210ENST00000553779 COL5A3P25940 1745 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-210ENST00000553779 YBX3P16989 372 aaKnown RBP eCLIP13.57□□□□□ -0.242e-8■■■■■ 29.2
ACTN1-210ENST00000553779 SSFA2P28290 1259 aa13.57□□□□□ -0.24
ACTN1-210ENST00000553779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.247e-7■■■□□ 15.2
ACTN1-210ENST00000553779 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
ACTN1-210ENST00000553779 WWC3Q9ULE0 1092 aa13.57□□□□□ -0.24
ACTN1-210ENST00000553779 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-210ENST00000553779 PHKG2P15735 406 aa13.56□□□□□ -0.24
ACTN1-210ENST00000553779 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
ACTN1-210ENST00000553779 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-210ENST00000553779 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-210ENST00000553779 HSP90AB1P08238 724 aaKnown RBP13.55□□□□□ -0.24
ACTN1-210ENST00000553779 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms