RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 TATP17735 454 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-208ENST00000553753 ACSBG1Q96GR2 724 aa13.93□□□□□ -0.18
HNRNPC-208ENST00000553753 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
HNRNPC-208ENST00000553753 EYA1Q99502 592 aa13.92□□□□□ -0.18
HNRNPC-208ENST00000553753 EIF4A2Q14240 407 aaKnown RBP13.91□□□□□ -0.18
HNRNPC-208ENST00000553753 PSDA5PKW4 1024 aaPredicted RBP13.9□□□□□ -0.18
HNRNPC-208ENST00000553753 CC2D1BQ5T0F9 858 aaKnown RBP13.9□□□□□ -0.18
HNRNPC-208ENST00000553753 NCAPD2Q15021 1401 aa13.9□□□□□ -0.19
HNRNPC-208ENST00000553753 R3HDM1Q15032 1099 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 NBPF14Q5TI25 921 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 PROM2Q8N271 834 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 NPC1L1Q9UHC9 1359 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 PCDH11XQ9BZA7 1347 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 PCDH11YQ9BZA8 1340 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 RREB1Q92766 1687 aa13.88□□□□□ -0.19
HNRNPC-208ENST00000553753 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
HNRNPC-208ENST00000553753 SYTL4Q96C24 671 aaPredicted RBP13.87□□□□□ -0.19
HNRNPC-208ENST00000553753 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 MTHFSP49914 203 aa13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 TXNRD1Q16881 649 aa13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 IGSF1Q8N6C5 1336 aa13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 NUP188Q5SRE5 1749 aa13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 CYP27B1O15528 508 aa13.86□□□□□ -0.19
HNRNPC-208ENST00000553753 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.194e-12■■■□□ 16.5
HNRNPC-208ENST00000553753 BTAF1O14981 1849 aa13.84□□□□□ -0.19
HNRNPC-208ENST00000553753 IL13P35225 146 aa13.83□□□□□ -0.19
HNRNPC-208ENST00000553753 PKD1L3Q7Z443 1732 aa13.83□□□□□ -0.2
HNRNPC-208ENST00000553753 DOT1LQ8TEK3 1739 aa13.83□□□□□ -0.2
HNRNPC-208ENST00000553753 PLEKHG2Q9H7P9 1386 aa13.82□□□□□ -0.2
HNRNPC-208ENST00000553753 NKX1-1Q15270 411 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-208ENST00000553753 SULT6B1Q6IMI4 303 aa13.81□□□□□ -0.2
HNRNPC-208ENST00000553753 IFNL2Q8IZJ0 200 aa13.81□□□□□ -0.2
HNRNPC-208ENST00000553753 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-208ENST00000553753 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
HNRNPC-208ENST00000553753 PHKG2P15735 406 aa13.8□□□□□ -0.2
HNRNPC-208ENST00000553753 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
HNRNPC-208ENST00000553753 MPRIPQ6WCQ1 1025 aa13.8□□□□□ -0.2
HNRNPC-208ENST00000553753 KDRP35968 1356 aa13.79□□□□□ -0.2
HNRNPC-208ENST00000553753 DIAPH1O60610 1272 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-208ENST00000553753 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
HNRNPC-208ENST00000553753 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
HNRNPC-208ENST00000553753 LRRC4BQ9NT99 713 aa13.79□□□□□ -0.2
HNRNPC-208ENST00000553753 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
HNRNPC-208ENST00000553753 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
HNRNPC-208ENST00000553753 PIGBQ92521 554 aa13.76□□□□□ -0.21
HNRNPC-208ENST00000553753 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-208ENST00000553753 HMOX1P09601 288 aa13.76□□□□□ -0.21
HNRNPC-208ENST00000553753 KCNQ4P56696 695 aa13.76□□□□□ -0.21
HNRNPC-208ENST00000553753 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
HNRNPC-208ENST00000553753 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
HNRNPC-208ENST00000553753 LRP5O75197 1615 aa13.75□□□□□ -0.21
HNRNPC-208ENST00000553753 TOGARAM1Q9Y4F4 1720 aa13.75□□□□□ -0.21
HNRNPC-208ENST00000553753 ITGB4P16144 1822 aa13.75□□□□□ -0.21
HNRNPC-208ENST00000553753 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
HNRNPC-208ENST00000553753 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-208ENST00000553753 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
HNRNPC-208ENST00000553753 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
HNRNPC-208ENST00000553753 C1orf141Q5JVX7 400 aa13.74□□□□□ -0.21
HNRNPC-208ENST00000553753 SMARCC1Q92922 1105 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-208ENST00000553753 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
HNRNPC-208ENST00000553753 PDGFDQ9GZP0 370 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-208ENST00000553753 LY75O60449 1722 aa13.74□□□□□ -0.21
HNRNPC-208ENST00000553753 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 COL3A1P02461 1466 aaPredicted RBP13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 PALLDQ8WX93 1383 aa13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 U2SURPO15042 1029 aaKnown RBP13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 ZNF827Q17R98 1081 aa13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
HNRNPC-208ENST00000553753 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
HNRNPC-208ENST00000553753 HMGB2P26583 209 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-208ENST00000553753 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.21
HNRNPC-208ENST00000553753 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.22
HNRNPC-208ENST00000553753 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.22
HNRNPC-208ENST00000553753 NUDCQ9Y266 331 aa13.71□□□□□ -0.22
HNRNPC-208ENST00000553753 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-208ENST00000553753 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
HNRNPC-208ENST00000553753 ZBTB7AO95365 584 aa13.7□□□□□ -0.22
HNRNPC-208ENST00000553753 CABP4P57796 275 aa13.7□□□□□ -0.22
HNRNPC-208ENST00000553753 LOC102724428A0A0B4J2F2 783 aa13.69□□□□□ -0.22
HNRNPC-208ENST00000553753 SIK1P57059 783 aa13.69□□□□□ -0.22
HNRNPC-208ENST00000553753 MTHFSDQ2M296 383 aaKnown RBP13.69□□□□□ -0.22
HNRNPC-208ENST00000553753 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
HNRNPC-208ENST00000553753 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
HNRNPC-208ENST00000553753 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
HNRNPC-208ENST00000553753 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
HNRNPC-208ENST00000553753 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
HNRNPC-208ENST00000553753 MSH5O43196 834 aa13.67□□□□□ -0.22
HNRNPC-208ENST00000553753 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
HNRNPC-208ENST00000553753 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.226e-11■■□□□ 14.2
HNRNPC-208ENST00000553753 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
HNRNPC-208ENST00000553753 ATP6V1AP38606 617 aa13.66□□□□□ -0.22
HNRNPC-208ENST00000553753 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
HNRNPC-208ENST00000553753 C5P01031 1676 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms