RNA–Protein interactions for RNA: ENST00000553666.1

NDUFB1-203, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 2

Gene NDUFB1, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-203ENST00000553666 IL2RBP14784 551 aa16.57■□□□□ 0.24
NDUFB1-203ENST00000553666 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
NDUFB1-203ENST00000553666 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
NDUFB1-203ENST00000553666 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
NDUFB1-203ENST00000553666 THRAP3Q9Y2W1 955 aaKnown RBP16.57■□□□□ 0.24
NDUFB1-203ENST00000553666 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
NDUFB1-203ENST00000553666 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
NDUFB1-203ENST00000553666 BARGINQ6ZT62 677 aa16.56■□□□□ 0.24
NDUFB1-203ENST00000553666 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
NDUFB1-203ENST00000553666 GLI3P10071 1580 aa16.55■□□□□ 0.24
NDUFB1-203ENST00000553666 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
NDUFB1-203ENST00000553666 RUNDC1Q96C34 613 aa16.54■□□□□ 0.24
NDUFB1-203ENST00000553666 MEGF6O75095 1541 aa16.54■□□□□ 0.24
NDUFB1-203ENST00000553666 RXRBP28702 533 aa16.53■□□□□ 0.24
NDUFB1-203ENST00000553666 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
NDUFB1-203ENST00000553666 A0A0G2JS52 829 aa16.52■□□□□ 0.24
NDUFB1-203ENST00000553666 DISP2A7MBM2 1401 aa16.52■□□□□ 0.24
NDUFB1-203ENST00000553666 ONECUT3O60422 494 aaPredicted RBP16.52■□□□□ 0.24
NDUFB1-203ENST00000553666 MYT1Q01538 1121 aa16.52■□□□□ 0.24
NDUFB1-203ENST00000553666 MTHFSDQ2M296 383 aaKnown RBP16.52■□□□□ 0.24
NDUFB1-203ENST00000553666 EXOC5O00471 708 aa16.51■□□□□ 0.23
NDUFB1-203ENST00000553666 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
NDUFB1-203ENST00000553666 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
NDUFB1-203ENST00000553666 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
NDUFB1-203ENST00000553666 CDCA7Q9BWT1 371 aaPredicted RBP16.51■□□□□ 0.23
NDUFB1-203ENST00000553666 APAF1O14727 1248 aa16.5■□□□□ 0.23
NDUFB1-203ENST00000553666 NEFMP07197 916 aa16.5■□□□□ 0.23
NDUFB1-203ENST00000553666 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
NDUFB1-203ENST00000553666 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
NDUFB1-203ENST00000553666 OVOS2A0A0G2JMS6 1433 aa16.5■□□□□ 0.23
NDUFB1-203ENST00000553666 DDB1Q16531 1140 aa16.49■□□□□ 0.23
NDUFB1-203ENST00000553666 AMOTQ4VCS5 1084 aa16.49■□□□□ 0.23
NDUFB1-203ENST00000553666 DDX54Q8TDD1 881 aaKnown RBP16.49■□□□□ 0.23
NDUFB1-203ENST00000553666 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
NDUFB1-203ENST00000553666 WNK3Q9BYP7 1800 aa16.48■□□□□ 0.23
NDUFB1-203ENST00000553666 NEUROD2Q15784 382 aa16.48■□□□□ 0.23
NDUFB1-203ENST00000553666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.23
NDUFB1-203ENST00000553666 CYP27B1O15528 508 aa16.47■□□□□ 0.23
NDUFB1-203ENST00000553666 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
NDUFB1-203ENST00000553666 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
NDUFB1-203ENST00000553666 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
NDUFB1-203ENST00000553666 PARP4Q9UKK3 1724 aaKnown RBP16.47■□□□□ 0.23
NDUFB1-203ENST00000553666 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
NDUFB1-203ENST00000553666 GAS2L2Q8NHY3 880 aa16.46■□□□□ 0.23
NDUFB1-203ENST00000553666 RIPK4P57078 832 aa16.45■□□□□ 0.22
NDUFB1-203ENST00000553666 PDE3BQ13370 1112 aa16.45■□□□□ 0.22
NDUFB1-203ENST00000553666 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
NDUFB1-203ENST00000553666 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
NDUFB1-203ENST00000553666 PHKG2P15735 406 aa16.45■□□□□ 0.22
NDUFB1-203ENST00000553666 IFNL2Q8IZJ0 200 aa16.45■□□□□ 0.22
NDUFB1-203ENST00000553666 PKD1L3Q7Z443 1732 aa16.44■□□□□ 0.22
NDUFB1-203ENST00000553666 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
NDUFB1-203ENST00000553666 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
NDUFB1-203ENST00000553666 AKAP4Q5JQC9 854 aa16.44■□□□□ 0.22
NDUFB1-203ENST00000553666 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
NDUFB1-203ENST00000553666 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
NDUFB1-203ENST00000553666 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
NDUFB1-203ENST00000553666 SHANK3Q9BYB0 1731 aa16.43■□□□□ 0.22
NDUFB1-203ENST00000553666 TNS2Q63HR2 1409 aa16.43■□□□□ 0.22
NDUFB1-203ENST00000553666 PCDH11XQ9BZA7 1347 aa16.43■□□□□ 0.22
NDUFB1-203ENST00000553666 PCDH11YQ9BZA8 1340 aa16.43■□□□□ 0.22
NDUFB1-203ENST00000553666 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
NDUFB1-203ENST00000553666 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
NDUFB1-203ENST00000553666 LGR6Q9HBX8 967 aa16.43■□□□□ 0.22
NDUFB1-203ENST00000553666 RGS12O14924 1447 aa16.42■□□□□ 0.22
NDUFB1-203ENST00000553666 PLEKHG2Q9H7P9 1386 aa16.42■□□□□ 0.22
NDUFB1-203ENST00000553666 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
NDUFB1-203ENST00000553666 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
NDUFB1-203ENST00000553666 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
NDUFB1-203ENST00000553666 BRWD3Q6RI45 1802 aa16.41■□□□□ 0.22
NDUFB1-203ENST00000553666 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
NDUFB1-203ENST00000553666 MCM10Q7L590 875 aa16.41■□□□□ 0.22
NDUFB1-203ENST00000553666 KRT27Q7Z3Y8 459 aa16.41■□□□□ 0.22
NDUFB1-203ENST00000553666 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
NDUFB1-203ENST00000553666 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
NDUFB1-203ENST00000553666 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
NDUFB1-203ENST00000553666 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
NDUFB1-203ENST00000553666 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
NDUFB1-203ENST00000553666 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
NDUFB1-203ENST00000553666 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
NDUFB1-203ENST00000553666 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
NDUFB1-203ENST00000553666 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
NDUFB1-203ENST00000553666 WWC1Q8IX03 1113 aa16.37■□□□□ 0.21
NDUFB1-203ENST00000553666 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
NDUFB1-203ENST00000553666 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
NDUFB1-203ENST00000553666 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
NDUFB1-203ENST00000553666 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
NDUFB1-203ENST00000553666 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
NDUFB1-203ENST00000553666 CCDC27Q2M243 656 aa16.35■□□□□ 0.21
NDUFB1-203ENST00000553666 KAT6BQ8WYB5 2073 aa16.35■□□□□ 0.21
NDUFB1-203ENST00000553666 KCNQ2O43526 872 aa16.34■□□□□ 0.21
NDUFB1-203ENST00000553666 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
NDUFB1-203ENST00000553666 CABP4P57796 275 aa16.33■□□□□ 0.2
NDUFB1-203ENST00000553666 PTF1AQ7RTS3 328 aa16.33■□□□□ 0.2
NDUFB1-203ENST00000553666 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
NDUFB1-203ENST00000553666 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
NDUFB1-203ENST00000553666 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.2
NDUFB1-203ENST00000553666 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
NDUFB1-203ENST00000553666 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.2
NDUFB1-203ENST00000553666 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms