RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 IL2RBP14784 551 aa12.84□□□□□ -0.35
CHD8-204ENST00000553622 SHANK3Q9BYB0 1731 aa12.84□□□□□ -0.35
CHD8-204ENST00000553622 SPATA31A1Q5TZJ5 1347 aa12.84□□□□□ -0.35
CHD8-204ENST00000553622 A0A0G2JS52 829 aa12.83□□□□□ -0.36
CHD8-204ENST00000553622 MYT1Q01538 1121 aa12.83□□□□□ -0.36
CHD8-204ENST00000553622 VPS72Q15906 364 aa12.83□□□□□ -0.36
CHD8-204ENST00000553622 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
CHD8-204ENST00000553622 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
CHD8-204ENST00000553622 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
CHD8-204ENST00000553622 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
CHD8-204ENST00000553622 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
CHD8-204ENST00000553622 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
CHD8-204ENST00000553622 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
CHD8-204ENST00000553622 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
CHD8-204ENST00000553622 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
CHD8-204ENST00000553622 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
CHD8-204ENST00000553622 OVOS2A0A0G2JMS6 1433 aa12.81□□□□□ -0.36
CHD8-204ENST00000553622 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
CHD8-204ENST00000553622 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
CHD8-204ENST00000553622 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
CHD8-204ENST00000553622 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
CHD8-204ENST00000553622 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
CHD8-204ENST00000553622 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
CHD8-204ENST00000553622 ZCRB1Q8TBF4 217 aaKnown RBP12.8□□□□□ -0.36
CHD8-204ENST00000553622 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
CHD8-204ENST00000553622 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
CHD8-204ENST00000553622 THRAP3Q9Y2W1 955 aaKnown RBP12.8□□□□□ -0.36
CHD8-204ENST00000553622 GLI3P10071 1580 aa12.8□□□□□ -0.36
CHD8-204ENST00000553622 MAP3K5Q99683 1374 aa12.8□□□□□ -0.36
CHD8-204ENST00000553622 ATRNO75882 1429 aa12.79□□□□□ -0.36
CHD8-204ENST00000553622 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
CHD8-204ENST00000553622 DCTN1Q14203 1278 aa12.79□□□□□ -0.36
CHD8-204ENST00000553622 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
CHD8-204ENST00000553622 THUMPD2Q9BTF0 503 aaKnown RBP12.79□□□□□ -0.36
CHD8-204ENST00000553622 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
CHD8-204ENST00000553622 ZNF772Q68DY9 489 aaPredicted RBP12.78□□□□□ -0.36
CHD8-204ENST00000553622 MCM10Q7L590 875 aa12.78□□□□□ -0.36
CHD8-204ENST00000553622 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
CHD8-204ENST00000553622 GJD4Q96KN9 370 aaPredicted RBP12.78□□□□□ -0.36
CHD8-204ENST00000553622 CDCA7Q9BWT1 371 aaPredicted RBP12.78□□□□□ -0.36
CHD8-204ENST00000553622 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
CHD8-204ENST00000553622 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
CHD8-204ENST00000553622 PCDH11XQ9BZA7 1347 aa12.78□□□□□ -0.36
CHD8-204ENST00000553622 PCDH11YQ9BZA8 1340 aa12.78□□□□□ -0.36
CHD8-204ENST00000553622 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
CHD8-204ENST00000553622 BRWD3Q6RI45 1802 aa12.77□□□□□ -0.37
CHD8-204ENST00000553622 EXOC5O00471 708 aa12.77□□□□□ -0.37
CHD8-204ENST00000553622 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CHD8-204ENST00000553622 BARGINQ6ZT62 677 aa12.77□□□□□ -0.37
CHD8-204ENST00000553622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHD8-204ENST00000553622 ITGB4P16144 1822 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 DDB1Q16531 1140 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 TNS2Q63HR2 1409 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 THSD7AQ9UPZ6 1657 aa12.76□□□□□ -0.37
CHD8-204ENST00000553622 CYP27B1O15528 508 aa12.75□□□□□ -0.37
CHD8-204ENST00000553622 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
CHD8-204ENST00000553622 CENPBP07199 599 aaPredicted RBP12.75□□□□□ -0.37
CHD8-204ENST00000553622 PHKG2P15735 406 aa12.75□□□□□ -0.37
CHD8-204ENST00000553622 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
CHD8-204ENST00000553622 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
CHD8-204ENST00000553622 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
CHD8-204ENST00000553622 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
CHD8-204ENST00000553622 ZNF521Q96K83 1311 aa12.74□□□□□ -0.37
CHD8-204ENST00000553622 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
CHD8-204ENST00000553622 WDR63Q8IWG1 891 aa12.74□□□□□ -0.37
CHD8-204ENST00000553622 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
CHD8-204ENST00000553622 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
CHD8-204ENST00000553622 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
CHD8-204ENST00000553622 HTATSF1O43719 755 aaKnown RBP12.73□□□□□ -0.37
CHD8-204ENST00000553622 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
CHD8-204ENST00000553622 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
CHD8-204ENST00000553622 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
CHD8-204ENST00000553622 TEFQ10587 303 aa12.72□□□□□ -0.37
CHD8-204ENST00000553622 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
CHD8-204ENST00000553622 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
CHD8-204ENST00000553622 E9PSI1 815 aa12.71□□□□□ -0.37
CHD8-204ENST00000553622 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.37
CHD8-204ENST00000553622 SEPT12Q8IYM1 358 aa12.71□□□□□ -0.37
CHD8-204ENST00000553622 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
CHD8-204ENST00000553622 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
CHD8-204ENST00000553622 MYH16Q9H6N6 1097 aa12.71□□□□□ -0.37
CHD8-204ENST00000553622 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
CHD8-204ENST00000553622 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.38
CHD8-204ENST00000553622 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
CHD8-204ENST00000553622 RXRBP28702 533 aa12.7□□□□□ -0.38
CHD8-204ENST00000553622 CABP4P57796 275 aa12.7□□□□□ -0.38
CHD8-204ENST00000553622 GNAI1P63096 354 aa12.7□□□□□ -0.38
CHD8-204ENST00000553622 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
CHD8-204ENST00000553622 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
CHD8-204ENST00000553622 IL16Q14005 1332 aa12.69□□□□□ -0.38
CHD8-204ENST00000553622 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
CHD8-204ENST00000553622 SYTL4Q96C24 671 aaPredicted RBP12.69□□□□□ -0.38
CHD8-204ENST00000553622 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
CHD8-204ENST00000553622 RGS17Q9UGC6 210 aaPredicted RBP12.69□□□□□ -0.38
CHD8-204ENST00000553622 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
CHD8-204ENST00000553622 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms