RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
SIX1-202ENST00000553535 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
SIX1-202ENST00000553535 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
SIX1-202ENST00000553535 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
SIX1-202ENST00000553535 PTGER2P43116 358 aa17.34■□□□□ 0.37
SIX1-202ENST00000553535 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.37
SIX1-202ENST00000553535 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.37
SIX1-202ENST00000553535 NBPF4Q96M43 638 aa17.33■□□□□ 0.37
SIX1-202ENST00000553535 CARD14Q9BXL6 1004 aa17.33■□□□□ 0.37
SIX1-202ENST00000553535 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.37
SIX1-202ENST00000553535 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.37
SIX1-202ENST00000553535 PAPPAQ13219 1627 aa17.32■□□□□ 0.36
SIX1-202ENST00000553535 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
SIX1-202ENST00000553535 SHANK3Q9BYB0 1731 aa17.31■□□□□ 0.36
SIX1-202ENST00000553535 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
SIX1-202ENST00000553535 MEGF6O75095 1541 aa17.31■□□□□ 0.36
SIX1-202ENST00000553535 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
SIX1-202ENST00000553535 HSP90AB2PQ58FF8 381 aa17.3■□□□□ 0.36
SIX1-202ENST00000553535 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
SIX1-202ENST00000553535 MTFR1LQ9H019 292 aa17.3■□□□□ 0.36
SIX1-202ENST00000553535 ZNF827Q17R98 1081 aa17.29■□□□□ 0.36
SIX1-202ENST00000553535 SLC27A3Q5K4L6 730 aa17.29■□□□□ 0.36
SIX1-202ENST00000553535 INSRP06213 1382 aa17.29■□□□□ 0.36
SIX1-202ENST00000553535 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
SIX1-202ENST00000553535 MYOM1P52179 1685 aa17.28■□□□□ 0.36
SIX1-202ENST00000553535 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
SIX1-202ENST00000553535 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
SIX1-202ENST00000553535 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
SIX1-202ENST00000553535 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
SIX1-202ENST00000553535 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
SIX1-202ENST00000553535 NSD2O96028 1365 aa17.27■□□□□ 0.36
SIX1-202ENST00000553535 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.35
SIX1-202ENST00000553535 FLT4P35916 1363 aa17.26■□□□□ 0.35
SIX1-202ENST00000553535 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
SIX1-202ENST00000553535 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
SIX1-202ENST00000553535 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
SIX1-202ENST00000553535 TATP17735 454 aaPredicted RBP17.25■□□□□ 0.35
SIX1-202ENST00000553535 LY75O60449 1722 aa17.24■□□□□ 0.35
SIX1-202ENST00000553535 YY1P25490 414 aa17.24■□□□□ 0.35
SIX1-202ENST00000553535 KCNQ4P56696 695 aa17.24■□□□□ 0.35
SIX1-202ENST00000553535 SYT17Q9BSW7 474 aa17.24■□□□□ 0.35
SIX1-202ENST00000553535 FHDC1Q9C0D6 1143 aaPredicted RBP17.24■□□□□ 0.35
SIX1-202ENST00000553535 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
SIX1-202ENST00000553535 EMILIN1Q9Y6C2 1016 aa17.24■□□□□ 0.35
SIX1-202ENST00000553535 SLC16A10Q8TF71 515 aa17.23■□□□□ 0.35
SIX1-202ENST00000553535 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
SIX1-202ENST00000553535 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
SIX1-202ENST00000553535 ARXQ96QS3 562 aa17.22■□□□□ 0.35
SIX1-202ENST00000553535 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
SIX1-202ENST00000553535 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
SIX1-202ENST00000553535 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
SIX1-202ENST00000553535 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
SIX1-202ENST00000553535 UTRNP46939 3433 aa17.2■□□□□ 0.34
SIX1-202ENST00000553535 CYP27B1O15528 508 aa17.19■□□□□ 0.34
SIX1-202ENST00000553535 TFCP2L1Q9NZI6 479 aa17.19■□□□□ 0.34
SIX1-202ENST00000553535 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
SIX1-202ENST00000553535 TUBGCP6Q96RT7 1819 aa17.19■□□□□ 0.34
SIX1-202ENST00000553535 NCAPD2Q15021 1401 aa17.19■□□□□ 0.34
SIX1-202ENST00000553535 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
SIX1-202ENST00000553535 COL24A1Q17RW2 1714 aa17.18■□□□□ 0.34
SIX1-202ENST00000553535 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
SIX1-202ENST00000553535 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
SIX1-202ENST00000553535 MAP3K5Q99683 1374 aa17.17■□□□□ 0.34
SIX1-202ENST00000553535 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.34
SIX1-202ENST00000553535 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
SIX1-202ENST00000553535 EYA1Q99502 592 aa17.16■□□□□ 0.34
SIX1-202ENST00000553535 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
SIX1-202ENST00000553535 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
SIX1-202ENST00000553535 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
SIX1-202ENST00000553535 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
SIX1-202ENST00000553535 ITGB4P16144 1822 aa17.15■□□□□ 0.34
SIX1-202ENST00000553535 POLD1P28340 1107 aa17.14■□□□□ 0.33
SIX1-202ENST00000553535 COL23A1Q86Y22 540 aaPredicted RBP17.14■□□□□ 0.33
SIX1-202ENST00000553535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.33
SIX1-202ENST00000553535 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
SIX1-202ENST00000553535 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
SIX1-202ENST00000553535 PANK3Q9H999 370 aa17.13■□□□□ 0.33
SIX1-202ENST00000553535 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
SIX1-202ENST00000553535 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
SIX1-202ENST00000553535 HMGB2P26583 209 aaKnown RBP17.11■□□□□ 0.33
SIX1-202ENST00000553535 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
SIX1-202ENST00000553535 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
SIX1-202ENST00000553535 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
SIX1-202ENST00000553535 PIGBQ92521 554 aa17.11■□□□□ 0.33
SIX1-202ENST00000553535 CHD4Q14839 1912 aa17.11■□□□□ 0.33
SIX1-202ENST00000553535 C5P01031 1676 aa17.11■□□□□ 0.33
SIX1-202ENST00000553535 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
SIX1-202ENST00000553535 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.33
SIX1-202ENST00000553535 PHKG2P15735 406 aa17.08■□□□□ 0.32
SIX1-202ENST00000553535 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.32
SIX1-202ENST00000553535 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
SIX1-202ENST00000553535 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
SIX1-202ENST00000553535 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
SIX1-202ENST00000553535 GPR162Q16538 588 aa17.06■□□□□ 0.32
SIX1-202ENST00000553535 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
SIX1-202ENST00000553535 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
SIX1-202ENST00000553535 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
SIX1-202ENST00000553535 AMIGO3Q86WK7 504 aa17.05■□□□□ 0.32
SIX1-202ENST00000553535 ZNF784Q8NCA9 323 aaPredicted RBP17.05■□□□□ 0.32
SIX1-202ENST00000553535 TMOD3Q9NYL9 352 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms