RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
ATL1-203ENST00000553509 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
ATL1-203ENST00000553509 EP400Q96L91 3159 aa17.91■□□□□ 0.46
ATL1-203ENST00000553509 IL13P35225 146 aa17.91■□□□□ 0.46
ATL1-203ENST00000553509 CCDC125Q86Z20 511 aa17.91■□□□□ 0.46
ATL1-203ENST00000553509 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
ATL1-203ENST00000553509 BCL9O00512 1426 aa17.89■□□□□ 0.46
ATL1-203ENST00000553509 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
ATL1-203ENST00000553509 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
ATL1-203ENST00000553509 MYBBP1AQ9BQG0 1328 aaKnown RBP17.89■□□□□ 0.45
ATL1-203ENST00000553509 SF3B2Q13435 895 aaKnown RBP17.88■□□□□ 0.45
ATL1-203ENST00000553509 TNS1Q9HBL0 1735 aaKnown RBP17.88■□□□□ 0.45
ATL1-203ENST00000553509 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
ATL1-203ENST00000553509 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
ATL1-203ENST00000553509 KDRP35968 1356 aa17.88■□□□□ 0.45
ATL1-203ENST00000553509 MARCH10Q8NA82 808 aaPredicted RBP17.87■□□□□ 0.45
ATL1-203ENST00000553509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
ATL1-203ENST00000553509 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
ATL1-203ENST00000553509 FAM182BQ5T319 152 aa17.86■□□□□ 0.45
ATL1-203ENST00000553509 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
ATL1-203ENST00000553509 PRKRIP1Q9H875 184 aaPredicted RBP17.86■□□□□ 0.45
ATL1-203ENST00000553509 NHSQ6T4R5 1651 aa17.86■□□□□ 0.45
ATL1-203ENST00000553509 DDX54Q8TDD1 881 aaKnown RBP17.85■□□□□ 0.45
ATL1-203ENST00000553509 DOT1LQ8TEK3 1739 aa17.84■□□□□ 0.45
ATL1-203ENST00000553509 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
ATL1-203ENST00000553509 AMOTQ4VCS5 1084 aa17.83■□□□□ 0.44
ATL1-203ENST00000553509 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
ATL1-203ENST00000553509 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
ATL1-203ENST00000553509 PLEKHO1Q53GL0 409 aaPredicted RBP17.82■□□□□ 0.44
ATL1-203ENST00000553509 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
ATL1-203ENST00000553509 ANP32CO43423 234 aa17.81■□□□□ 0.44
ATL1-203ENST00000553509 TRIM37O94972 964 aa17.81■□□□□ 0.44
ATL1-203ENST00000553509 HMOX1P09601 288 aa17.8■□□□□ 0.44
ATL1-203ENST00000553509 BAG6P46379 1132 aa17.8■□□□□ 0.44
ATL1-203ENST00000553509 BTAF1O14981 1849 aa17.79■□□□□ 0.44
ATL1-203ENST00000553509 VIRMAQ69YN4 1812 aaKnown RBP17.79■□□□□ 0.44
ATL1-203ENST00000553509 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
ATL1-203ENST00000553509 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.44
ATL1-203ENST00000553509 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
ATL1-203ENST00000553509 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
ATL1-203ENST00000553509 ITGB4P16144 1822 aa17.79■□□□□ 0.44
ATL1-203ENST00000553509 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
ATL1-203ENST00000553509 CYP27B1O15528 508 aa17.77■□□□□ 0.44
ATL1-203ENST00000553509 C1orf141Q5JVX7 400 aa17.77■□□□□ 0.44
ATL1-203ENST00000553509 ZNF530Q6P9A1 599 aaPredicted RBP17.77■□□□□ 0.44
ATL1-203ENST00000553509 TOGARAM1Q9Y4F4 1720 aa17.76■□□□□ 0.43
ATL1-203ENST00000553509 FCHSD2O94868 740 aa17.76■□□□□ 0.43
ATL1-203ENST00000553509 NEFMP07197 916 aa17.76■□□□□ 0.43
ATL1-203ENST00000553509 PHKG2P15735 406 aa17.76■□□□□ 0.43
ATL1-203ENST00000553509 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
ATL1-203ENST00000553509 SCN11AQ9UI33 1791 aa17.76■□□□□ 0.43
ATL1-203ENST00000553509 APBA3O96018 575 aa17.75■□□□□ 0.43
ATL1-203ENST00000553509 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
ATL1-203ENST00000553509 ACSBG1Q96GR2 724 aa17.74■□□□□ 0.43
ATL1-203ENST00000553509 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
ATL1-203ENST00000553509 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
ATL1-203ENST00000553509 GAS2L2Q8NHY3 880 aa17.73■□□□□ 0.43
ATL1-203ENST00000553509 RREB1Q92766 1687 aa17.73■□□□□ 0.43
ATL1-203ENST00000553509 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
ATL1-203ENST00000553509 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
ATL1-203ENST00000553509 SYTL4Q96C24 671 aaPredicted RBP17.72■□□□□ 0.43
ATL1-203ENST00000553509 DCAF5Q96JK2 942 aa17.72■□□□□ 0.43
ATL1-203ENST00000553509 KCNQ2O43526 872 aa17.71■□□□□ 0.43
ATL1-203ENST00000553509 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
ATL1-203ENST00000553509 DEFB132Q7Z7B7 95 aa17.71■□□□□ 0.43
ATL1-203ENST00000553509 PLSCR1O15162 318 aa17.7■□□□□ 0.42
ATL1-203ENST00000553509 LY75O60449 1722 aa17.69■□□□□ 0.42
ATL1-203ENST00000553509 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
ATL1-203ENST00000553509 ADAMTS7Q9UKP4 1686 aa17.69■□□□□ 0.42
ATL1-203ENST00000553509 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
ATL1-203ENST00000553509 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
ATL1-203ENST00000553509 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
ATL1-203ENST00000553509 ERVV-2B6SEH9 535 aa17.68■□□□□ 0.42
ATL1-203ENST00000553509 NUP188Q5SRE5 1749 aa17.68■□□□□ 0.42
ATL1-203ENST00000553509 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
ATL1-203ENST00000553509 MAP3K5Q99683 1374 aa17.67■□□□□ 0.42
ATL1-203ENST00000553509 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
ATL1-203ENST00000553509 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
ATL1-203ENST00000553509 GNAT3A8MTJ3 354 aa17.66■□□□□ 0.42
ATL1-203ENST00000553509 MPRIPQ6WCQ1 1025 aa17.66■□□□□ 0.42
ATL1-203ENST00000553509 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
ATL1-203ENST00000553509 MRC1P22897 1456 aa17.65■□□□□ 0.42
ATL1-203ENST00000553509 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
ATL1-203ENST00000553509 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
ATL1-203ENST00000553509 PHACTR3Q96KR7 559 aa17.65■□□□□ 0.42
ATL1-203ENST00000553509 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
ATL1-203ENST00000553509 CABP4P57796 275 aa17.64■□□□□ 0.41
ATL1-203ENST00000553509 MRS2Q9HD23 443 aa17.64■□□□□ 0.41
ATL1-203ENST00000553509 PLEKHF1Q96S99 279 aa17.63■□□□□ 0.41
ATL1-203ENST00000553509 SIPA1L3O60292 1781 aaPredicted RBP17.63■□□□□ 0.41
ATL1-203ENST00000553509 RNMTO43148 476 aaKnown RBP17.62■□□□□ 0.41
ATL1-203ENST00000553509 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
ATL1-203ENST00000553509 SLC27A3Q5K4L6 730 aa17.62■□□□□ 0.41
ATL1-203ENST00000553509 PIGBQ92521 554 aa17.62■□□□□ 0.41
ATL1-203ENST00000553509 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
ATL1-203ENST00000553509 TXNRD1Q16881 649 aa17.61■□□□□ 0.41
ATL1-203ENST00000553509 PALLDQ8WX93 1383 aa17.61■□□□□ 0.41
ATL1-203ENST00000553509 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
ATL1-203ENST00000553509 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
ATL1-203ENST00000553509 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms