RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 L3MBTL2Q969R5 705 aa12.14□□□□□ -0.47
NPC2-204ENST00000553490 MEGF6O75095 1541 aa12.13□□□□□ -0.47
NPC2-204ENST00000553490 MSH5O43196 834 aa12.13□□□□□ -0.47
NPC2-204ENST00000553490 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
NPC2-204ENST00000553490 ADCY9O60503 1353 aa12.13□□□□□ -0.47
NPC2-204ENST00000553490 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
NPC2-204ENST00000553490 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
NPC2-204ENST00000553490 HDGFL2Q7Z4V5 671 aaPredicted RBP12.12□□□□□ -0.47
NPC2-204ENST00000553490 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
NPC2-204ENST00000553490 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
NPC2-204ENST00000553490 A0A1W2PP64 1363 aa12.11□□□□□ -0.47
NPC2-204ENST00000553490 USP47Q96K76 1375 aa12.11□□□□□ -0.47
NPC2-204ENST00000553490 LTV1Q96GA3 475 aaPredicted RBP12.11□□□□□ -0.47
NPC2-204ENST00000553490 HSPA6P17066 643 aa12.1□□□□□ -0.47
NPC2-204ENST00000553490 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
NPC2-204ENST00000553490 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
NPC2-204ENST00000553490 IP6K1Q92551 441 aa12.1□□□□□ -0.47
NPC2-204ENST00000553490 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
NPC2-204ENST00000553490 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
NPC2-204ENST00000553490 TOGARAM1Q9Y4F4 1720 aa12.08□□□□□ -0.47
NPC2-204ENST00000553490 C4BP0C0L5 1744 aa12.07□□□□□ -0.48
NPC2-204ENST00000553490 ZCRB1Q8TBF4 217 aaKnown RBP12.07□□□□□ -0.48
NPC2-204ENST00000553490 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
NPC2-204ENST00000553490 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
NPC2-204ENST00000553490 MAP3K19Q56UN5 1328 aa12.07□□□□□ -0.48
NPC2-204ENST00000553490 RTL1A6NKG5 1358 aa12.06□□□□□ -0.48
NPC2-204ENST00000553490 HOXC9P31274 260 aa12.06□□□□□ -0.48
NPC2-204ENST00000553490 SLC12A5Q9H2X9 1139 aa12.06□□□□□ -0.48
NPC2-204ENST00000553490 CICQ96RK0 1608 aaPredicted RBP12.06□□□□□ -0.48
NPC2-204ENST00000553490 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
NPC2-204ENST00000553490 AMPHP49418 695 aa12.05□□□□□ -0.48
NPC2-204ENST00000553490 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
NPC2-204ENST00000553490 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
NPC2-204ENST00000553490 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
NPC2-204ENST00000553490 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
NPC2-204ENST00000553490 SIN3AQ96ST3 1273 aa12.04□□□□□ -0.48
NPC2-204ENST00000553490 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
NPC2-204ENST00000553490 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
NPC2-204ENST00000553490 COG3Q96JB2 828 aa12.03□□□□□ -0.48
NPC2-204ENST00000553490 CARD11Q9BXL7 1154 aa12.03□□□□□ -0.48
NPC2-204ENST00000553490 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
NPC2-204ENST00000553490 NEUROD1Q13562 356 aa12.02□□□□□ -0.49
NPC2-204ENST00000553490 USHBP1Q8N6Y0 703 aa12.02□□□□□ -0.49
NPC2-204ENST00000553490 RAPGEF4Q8WZA2 1011 aa12.02□□□□□ -0.49
NPC2-204ENST00000553490 AK7Q96M32 723 aa12.02□□□□□ -0.49
NPC2-204ENST00000553490 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
NPC2-204ENST00000553490 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
NPC2-204ENST00000553490 ITGB4P16144 1822 aa12.02□□□□□ -0.49
NPC2-204ENST00000553490 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
NPC2-204ENST00000553490 KIF3CO14782 793 aa12.01□□□□□ -0.49
NPC2-204ENST00000553490 PHF14O94880 888 aa12.01□□□□□ -0.49
NPC2-204ENST00000553490 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
NPC2-204ENST00000553490 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
NPC2-204ENST00000553490 FBLN1P23142 703 aa12□□□□□ -0.49
NPC2-204ENST00000553490 NBPF6Q5VWK0 638 aa12□□□□□ -0.49
NPC2-204ENST00000553490 NBPF4Q96M43 638 aa12□□□□□ -0.49
NPC2-204ENST00000553490 RRS1Q15050 365 aaKnown RBP11.99□□□□□ -0.49
NPC2-204ENST00000553490 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
NPC2-204ENST00000553490 AMIGO3Q86WK7 504 aa11.99□□□□□ -0.49
NPC2-204ENST00000553490 KIAA1551Q9HCM1 1747 aa11.99□□□□□ -0.49
NPC2-204ENST00000553490 KIF20BQ96Q89 1820 aa11.99□□□□□ -0.49
NPC2-204ENST00000553490 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
NPC2-204ENST00000553490 WDR90Q96KV7 1748 aa11.98□□□□□ -0.49
NPC2-204ENST00000553490 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
NPC2-204ENST00000553490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
NPC2-204ENST00000553490 APLP1P51693 650 aa11.98□□□□□ -0.49
NPC2-204ENST00000553490 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
NPC2-204ENST00000553490 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
NPC2-204ENST00000553490 SSFA2P28290 1259 aa11.97□□□□□ -0.49
NPC2-204ENST00000553490 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
NPC2-204ENST00000553490 FLT4P35916 1363 aa11.96□□□□□ -0.49
NPC2-204ENST00000553490 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
NPC2-204ENST00000553490 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.49
NPC2-204ENST00000553490 INSRP06213 1382 aa11.95□□□□□ -0.5
NPC2-204ENST00000553490 CYP27B1O15528 508 aa11.95□□□□□ -0.5
NPC2-204ENST00000553490 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
NPC2-204ENST00000553490 GNPATO15228 680 aa11.94□□□□□ -0.5
NPC2-204ENST00000553490 TOMM70O94826 608 aa11.94□□□□□ -0.5
NPC2-204ENST00000553490 LINC00116Q8NCU8 138 aa11.94□□□□□ -0.5
NPC2-204ENST00000553490 GGNBP2Q9H3C7 697 aa11.94□□□□□ -0.5
NPC2-204ENST00000553490 KIF24Q5T7B8 1368 aa11.93□□□□□ -0.5
NPC2-204ENST00000553490 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
NPC2-204ENST00000553490 SIK1P57059 783 aa11.93□□□□□ -0.5
NPC2-204ENST00000553490 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
NPC2-204ENST00000553490 PIGBQ92521 554 aa11.93□□□□□ -0.5
NPC2-204ENST00000553490 ANKRD26Q9UPS8 1709 aa11.93□□□□□ -0.5
NPC2-204ENST00000553490 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
NPC2-204ENST00000553490 NCAPD2Q15021 1401 aa11.93□□□□□ -0.5
NPC2-204ENST00000553490 C4AP0C0L4 1744 aa11.92□□□□□ -0.5
NPC2-204ENST00000553490 MMP10P09238 476 aa11.92□□□□□ -0.5
NPC2-204ENST00000553490 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
NPC2-204ENST00000553490 TESK2Q96S53 571 aa11.92□□□□□ -0.5
NPC2-204ENST00000553490 NMRK2Q9NPI5 230 aa11.92□□□□□ -0.5
NPC2-204ENST00000553490 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
NPC2-204ENST00000553490 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
NPC2-204ENST00000553490 FYB1O15117 783 aa11.91□□□□□ -0.5
NPC2-204ENST00000553490 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
NPC2-204ENST00000553490 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
NPC2-204ENST00000553490 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
NPC2-204ENST00000553490 ITPK1Q13572 414 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms