RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 RREB1Q92766 1687 aa14□□□□□ -0.17
LINC00517-201ENST00000553396 PTF1AQ7RTS3 328 aa13.99□□□□□ -0.17
LINC00517-201ENST00000553396 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
LINC00517-201ENST00000553396 NHSQ6T4R5 1651 aa13.98□□□□□ -0.17
LINC00517-201ENST00000553396 WASHC2AQ641Q2 1341 aa13.98□□□□□ -0.17
LINC00517-201ENST00000553396 CAMKK2Q96RR4 588 aa13.98□□□□□ -0.17
LINC00517-201ENST00000553396 POLKQ9UBT6 870 aa13.98□□□□□ -0.17
LINC00517-201ENST00000553396 BCL9O00512 1426 aa13.98□□□□□ -0.17
LINC00517-201ENST00000553396 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
LINC00517-201ENST00000553396 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
LINC00517-201ENST00000553396 ACSBG1Q96GR2 724 aa13.97□□□□□ -0.17
LINC00517-201ENST00000553396 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
LINC00517-201ENST00000553396 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
LINC00517-201ENST00000553396 PSDA5PKW4 1024 aaPredicted RBP13.96□□□□□ -0.17
LINC00517-201ENST00000553396 BCL11BQ9C0K0 894 aaPredicted RBP13.96□□□□□ -0.17
LINC00517-201ENST00000553396 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.18
LINC00517-201ENST00000553396 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
LINC00517-201ENST00000553396 BTAF1O14981 1849 aa13.95□□□□□ -0.18
LINC00517-201ENST00000553396 KCNQ2O43526 872 aa13.95□□□□□ -0.18
LINC00517-201ENST00000553396 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
LINC00517-201ENST00000553396 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
LINC00517-201ENST00000553396 CNGB1Q14028 1251 aaPredicted RBP13.94□□□□□ -0.18
LINC00517-201ENST00000553396 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
LINC00517-201ENST00000553396 TATP17735 454 aaPredicted RBP13.93□□□□□ -0.18
LINC00517-201ENST00000553396 CC2D1BQ5T0F9 858 aaKnown RBP13.93□□□□□ -0.18
LINC00517-201ENST00000553396 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
LINC00517-201ENST00000553396 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
LINC00517-201ENST00000553396 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
LINC00517-201ENST00000553396 R3HDM1Q15032 1099 aaKnown RBP13.92□□□□□ -0.18
LINC00517-201ENST00000553396 EYA1Q99502 592 aa13.92□□□□□ -0.18
LINC00517-201ENST00000553396 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
LINC00517-201ENST00000553396 PLSCR1O15162 318 aa13.9□□□□□ -0.18
LINC00517-201ENST00000553396 SYTL4Q96C24 671 aaPredicted RBP13.9□□□□□ -0.18
LINC00517-201ENST00000553396 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.19
LINC00517-201ENST00000553396 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.19
LINC00517-201ENST00000553396 TXNRD1Q16881 649 aa13.88□□□□□ -0.19
LINC00517-201ENST00000553396 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
LINC00517-201ENST00000553396 SRCAPQ6ZRS2 3230 aa13.87□□□□□ -0.19
LINC00517-201ENST00000553396 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
LINC00517-201ENST00000553396 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
LINC00517-201ENST00000553396 PROM2Q8N271 834 aa13.87□□□□□ -0.19
LINC00517-201ENST00000553396 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
LINC00517-201ENST00000553396 ITGB4P16144 1822 aa13.86□□□□□ -0.19
LINC00517-201ENST00000553396 CYP27B1O15528 508 aa13.86□□□□□ -0.19
LINC00517-201ENST00000553396 MTHFSP49914 203 aa13.86□□□□□ -0.19
LINC00517-201ENST00000553396 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
LINC00517-201ENST00000553396 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
LINC00517-201ENST00000553396 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
LINC00517-201ENST00000553396 LRP5O75197 1615 aa13.85□□□□□ -0.19
LINC00517-201ENST00000553396 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
LINC00517-201ENST00000553396 LY75O60449 1722 aa13.84□□□□□ -0.19
LINC00517-201ENST00000553396 PAPPAQ13219 1627 aa13.83□□□□□ -0.2
LINC00517-201ENST00000553396 IL13P35225 146 aa13.83□□□□□ -0.2
LINC00517-201ENST00000553396 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
LINC00517-201ENST00000553396 MPRIPQ6WCQ1 1025 aa13.81□□□□□ -0.2
LINC00517-201ENST00000553396 STK32BQ9NY57 414 aa13.81□□□□□ -0.2
LINC00517-201ENST00000553396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00517-201ENST00000553396 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
LINC00517-201ENST00000553396 PHKG2P15735 406 aa13.8□□□□□ -0.2
LINC00517-201ENST00000553396 KCNQ4P56696 695 aa13.8□□□□□ -0.2
LINC00517-201ENST00000553396 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
LINC00517-201ENST00000553396 LRRC4BQ9NT99 713 aa13.8□□□□□ -0.2
LINC00517-201ENST00000553396 COL3A1P02461 1466 aaPredicted RBP13.8□□□□□ -0.2
LINC00517-201ENST00000553396 DIAPH1O60610 1272 aaKnown RBP13.79□□□□□ -0.2
LINC00517-201ENST00000553396 HMOX1P09601 288 aa13.79□□□□□ -0.2
LINC00517-201ENST00000553396 KDRP35968 1356 aa13.79□□□□□ -0.2
LINC00517-201ENST00000553396 PLEKHG2Q9H7P9 1386 aa13.79□□□□□ -0.2
LINC00517-201ENST00000553396 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
LINC00517-201ENST00000553396 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
LINC00517-201ENST00000553396 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
LINC00517-201ENST00000553396 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
LINC00517-201ENST00000553396 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
LINC00517-201ENST00000553396 TUBGCP6Q96RT7 1819 aa13.78□□□□□ -0.2
LINC00517-201ENST00000553396 C5P01031 1676 aa13.77□□□□□ -0.21
LINC00517-201ENST00000553396 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
LINC00517-201ENST00000553396 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
LINC00517-201ENST00000553396 VIRMAQ69YN4 1812 aaKnown RBP13.77□□□□□ -0.21
LINC00517-201ENST00000553396 PALLDQ8WX93 1383 aa13.77□□□□□ -0.21
LINC00517-201ENST00000553396 CCNL1Q9UK58 526 aaPredicted RBP13.77□□□□□ -0.21
LINC00517-201ENST00000553396 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
LINC00517-201ENST00000553396 TAF1LQ8IZX4 1826 aa13.76□□□□□ -0.21
LINC00517-201ENST00000553396 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
LINC00517-201ENST00000553396 AMOTQ4VCS5 1084 aa13.76□□□□□ -0.21
LINC00517-201ENST00000553396 PIGBQ92521 554 aa13.76□□□□□ -0.21
LINC00517-201ENST00000553396 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
LINC00517-201ENST00000553396 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
LINC00517-201ENST00000553396 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
LINC00517-201ENST00000553396 C1orf141Q5JVX7 400 aa13.75□□□□□ -0.21
LINC00517-201ENST00000553396 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
LINC00517-201ENST00000553396 QSER1Q2KHR3 1735 aa13.74□□□□□ -0.21
LINC00517-201ENST00000553396 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
LINC00517-201ENST00000553396 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
LINC00517-201ENST00000553396 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
LINC00517-201ENST00000553396 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
LINC00517-201ENST00000553396 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
LINC00517-201ENST00000553396 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
LINC00517-201ENST00000553396 DCAF5Q96JK2 942 aa13.73□□□□□ -0.21
LINC00517-201ENST00000553396 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
LINC00517-201ENST00000553396 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
LINC00517-201ENST00000553396 ASAP1Q9ULH1 1129 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms