RNA–Protein interactions for RNA: ENST00000553332.5

XRCC3-203, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-203ENST00000553332 NHSQ6T4R5 1651 aa19.57■□□□□ 0.72
XRCC3-203ENST00000553332 RREB1Q92766 1687 aa19.57■□□□□ 0.72
XRCC3-203ENST00000553332 KCNQ2O43526 872 aa19.57■□□□□ 0.72
XRCC3-203ENST00000553332 TATP17735 454 aaPredicted RBP19.57■□□□□ 0.72
XRCC3-203ENST00000553332 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
XRCC3-203ENST00000553332 EYA1Q99502 592 aa19.56■□□□□ 0.72
XRCC3-203ENST00000553332 PARD3Q8TEW0 1356 aa19.56■□□□□ 0.72
XRCC3-203ENST00000553332 NUP188Q5SRE5 1749 aa19.55■□□□□ 0.72
XRCC3-203ENST00000553332 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-203ENST00000553332 RGPD3A6NKT7 1758 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-203ENST00000553332 RGPD4Q7Z3J3 1758 aa19.54■□□□□ 0.72
XRCC3-203ENST00000553332 BTAF1O14981 1849 aa19.53■□□□□ 0.72
XRCC3-203ENST00000553332 DOT1LQ8TEK3 1739 aa19.53■□□□□ 0.72
XRCC3-203ENST00000553332 PLSCR1O15162 318 aa19.52■□□□□ 0.72
XRCC3-203ENST00000553332 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
XRCC3-203ENST00000553332 R3HDM1Q15032 1099 aaKnown RBP19.5■□□□□ 0.71
XRCC3-203ENST00000553332 PKD1L3Q7Z443 1732 aa19.5■□□□□ 0.71
XRCC3-203ENST00000553332 SYTL4Q96C24 671 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-203ENST00000553332 PCDH11XQ9BZA7 1347 aa19.49■□□□□ 0.71
XRCC3-203ENST00000553332 PCDH11YQ9BZA8 1340 aa19.49■□□□□ 0.71
XRCC3-203ENST00000553332 NPC1L1Q9UHC9 1359 aa19.48■□□□□ 0.71
XRCC3-203ENST00000553332 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
XRCC3-203ENST00000553332 MTHFSP49914 203 aa19.48■□□□□ 0.71
XRCC3-203ENST00000553332 NBPF14Q5TI25 921 aa19.47■□□□□ 0.71
XRCC3-203ENST00000553332 PROM2Q8N271 834 aa19.47■□□□□ 0.71
XRCC3-203ENST00000553332 IGSF1Q8N6C5 1336 aa19.47■□□□□ 0.71
XRCC3-203ENST00000553332 CYP27B1O15528 508 aa19.46■□□□□ 0.71
XRCC3-203ENST00000553332 TXNRD1Q16881 649 aa19.46■□□□□ 0.71
XRCC3-203ENST00000553332 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
XRCC3-203ENST00000553332 IL13P35225 146 aa19.44■□□□□ 0.7
XRCC3-203ENST00000553332 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
XRCC3-203ENST00000553332 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
XRCC3-203ENST00000553332 ITGB4P16144 1822 aa19.42■□□□□ 0.7
XRCC3-203ENST00000553332 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
XRCC3-203ENST00000553332 ANO8Q9HCE9 1232 aaPredicted RBP19.41■□□□□ 0.7
XRCC3-203ENST00000553332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.41■□□□□ 0.7
XRCC3-203ENST00000553332 DIAPH1O60610 1272 aaKnown RBP19.39■□□□□ 0.69
XRCC3-203ENST00000553332 PHKG2P15735 406 aa19.39■□□□□ 0.69
XRCC3-203ENST00000553332 IFNL2Q8IZJ0 200 aa19.39■□□□□ 0.69
XRCC3-203ENST00000553332 LY75O60449 1722 aa19.38■□□□□ 0.69
XRCC3-203ENST00000553332 PLEKHO1Q53GL0 409 aaPredicted RBP19.38■□□□□ 0.69
XRCC3-203ENST00000553332 MPRIPQ6WCQ1 1025 aa19.38■□□□□ 0.69
XRCC3-203ENST00000553332 HMOX1P09601 288 aa19.37■□□□□ 0.69
XRCC3-203ENST00000553332 NKX1-1Q15270 411 aaPredicted RBP19.37■□□□□ 0.69
XRCC3-203ENST00000553332 LRRC4BQ9NT99 713 aa19.37■□□□□ 0.69
XRCC3-203ENST00000553332 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
XRCC3-203ENST00000553332 SRCAPQ6ZRS2 3230 aa19.36■□□□□ 0.69
XRCC3-203ENST00000553332 KCNQ4P56696 695 aa19.36■□□□□ 0.69
XRCC3-203ENST00000553332 COL3A1P02461 1466 aaPredicted RBP19.35■□□□□ 0.69
XRCC3-203ENST00000553332 KDRP35968 1356 aa19.35■□□□□ 0.69
XRCC3-203ENST00000553332 PLEKHG2Q9H7P9 1386 aa19.35■□□□□ 0.69
XRCC3-203ENST00000553332 AMOTQ4VCS5 1084 aa19.35■□□□□ 0.69
XRCC3-203ENST00000553332 ZNF530Q6P9A1 599 aaPredicted RBP19.35■□□□□ 0.69
XRCC3-203ENST00000553332 LRP5O75197 1615 aa19.34■□□□□ 0.69
XRCC3-203ENST00000553332 PAPPAQ13219 1627 aa19.34■□□□□ 0.69
XRCC3-203ENST00000553332 PPP2R1AP30153 589 aa19.34■□□□□ 0.69
XRCC3-203ENST00000553332 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
XRCC3-203ENST00000553332 SLC15A2Q16348 729 aa19.34■□□□□ 0.69
XRCC3-203ENST00000553332 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.68
XRCC3-203ENST00000553332 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.68
XRCC3-203ENST00000553332 SLC27A3Q5K4L6 730 aa19.33■□□□□ 0.68
XRCC3-203ENST00000553332 PIGBQ92521 554 aa19.33■□□□□ 0.68
XRCC3-203ENST00000553332 CFAP53Q96M91 514 aa19.32■□□□□ 0.68
XRCC3-203ENST00000553332 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
XRCC3-203ENST00000553332 C1orf141Q5JVX7 400 aa19.31■□□□□ 0.68
XRCC3-203ENST00000553332 PDGFDQ9GZP0 370 aaPredicted RBP19.31■□□□□ 0.68
XRCC3-203ENST00000553332 TMOD3Q9NYL9 352 aa19.31■□□□□ 0.68
XRCC3-203ENST00000553332 CASZ1Q86V15 1759 aa19.31■□□□□ 0.68
XRCC3-203ENST00000553332 PALLDQ8WX93 1383 aa19.31■□□□□ 0.68
XRCC3-203ENST00000553332 HSP90AB1P08238 724 aaKnown RBP19.3■□□□□ 0.68
XRCC3-203ENST00000553332 ZNF827Q17R98 1081 aa19.3■□□□□ 0.68
XRCC3-203ENST00000553332 DCAF5Q96JK2 942 aa19.29■□□□□ 0.68
XRCC3-203ENST00000553332 VIRMAQ69YN4 1812 aaKnown RBP19.28■□□□□ 0.68
XRCC3-203ENST00000553332 SMARCC1Q92922 1105 aaPredicted RBP19.28■□□□□ 0.68
XRCC3-203ENST00000553332 TAF1LQ8IZX4 1826 aa19.28■□□□□ 0.68
XRCC3-203ENST00000553332 TUBGCP6Q96RT7 1819 aa19.28■□□□□ 0.68
XRCC3-203ENST00000553332 C5P01031 1676 aa19.27■□□□□ 0.68
XRCC3-203ENST00000553332 KDM6AO15550 1401 aaPredicted RBP19.27■□□□□ 0.68
XRCC3-203ENST00000553332 AKT1S1Q96B36 256 aa19.27■□□□□ 0.68
XRCC3-203ENST00000553332 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.67
XRCC3-203ENST00000553332 ERVV-2B6SEH9 535 aa19.26■□□□□ 0.67
XRCC3-203ENST00000553332 ASAP1Q9ULH1 1129 aa19.26■□□□□ 0.67
XRCC3-203ENST00000553332 ZBTB7AO95365 584 aa19.25■□□□□ 0.67
XRCC3-203ENST00000553332 CABP4P57796 275 aa19.25■□□□□ 0.67
XRCC3-203ENST00000553332 MTHFSDQ2M296 383 aaKnown RBP19.25■□□□□ 0.67
XRCC3-203ENST00000553332 AKAP4Q5JQC9 854 aa19.25■□□□□ 0.67
XRCC3-203ENST00000553332 SPON1Q9HCB6 807 aa19.25■□□□□ 0.67
XRCC3-203ENST00000553332 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
XRCC3-203ENST00000553332 TFCP2L1Q9NZI6 479 aa19.24■□□□□ 0.67
XRCC3-203ENST00000553332 QSER1Q2KHR3 1735 aa19.24■□□□□ 0.67
XRCC3-203ENST00000553332 ATG3Q9NT62 314 aa19.23■□□□□ 0.67
XRCC3-203ENST00000553332 ATF5Q9Y2D1 282 aaPredicted RBP19.23■□□□□ 0.67
XRCC3-203ENST00000553332 U2AF1L5P0DN76 240 aaPredicted RBP19.22■□□□□ 0.67
XRCC3-203ENST00000553332 U2AF1Q01081 240 aaKnown RBP eCLIP19.22■□□□□ 0.67
XRCC3-203ENST00000553332 LOC102724428A0A0B4J2F2 783 aa19.21■□□□□ 0.67
XRCC3-203ENST00000553332 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
XRCC3-203ENST00000553332 SIK1P57059 783 aa19.21■□□□□ 0.67
XRCC3-203ENST00000553332 NFATC2IPQ8NCF5 419 aa19.21■□□□□ 0.67
XRCC3-203ENST00000553332 LGR6Q9HBX8 967 aa19.21■□□□□ 0.67
XRCC3-203ENST00000553332 PNPLA7Q6ZV29 1317 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms