RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 KIF24Q5T7B8 1368 aa21.9■■□□□ 1.1
CDK4-215ENST00000553237 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
CDK4-215ENST00000553237 NHSQ6T4R5 1651 aa21.9■■□□□ 1.1
CDK4-215ENST00000553237 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.09
CDK4-215ENST00000553237 SYTL4Q96C24 671 aaPredicted RBP21.89■■□□□ 1.09
CDK4-215ENST00000553237 PRIM1P49642 420 aaKnown RBP21.88■■□□□ 1.09
CDK4-215ENST00000553237 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
CDK4-215ENST00000553237 POLKQ9UBT6 870 aa21.87■■□□□ 1.09
CDK4-215ENST00000553237 PDGFDQ9GZP0 370 aaPredicted RBP21.86■■□□□ 1.09
CDK4-215ENST00000553237 SPON1Q9HCB6 807 aa21.85■■□□□ 1.09
CDK4-215ENST00000553237 WASHC2AQ641Q2 1341 aa21.84■■□□□ 1.09
CDK4-215ENST00000553237 SLC15A2Q16348 729 aa21.84■■□□□ 1.09
CDK4-215ENST00000553237 BTAF1O14981 1849 aa21.83■■□□□ 1.09
CDK4-215ENST00000553237 LRRC4BQ9NT99 713 aa21.82■■□□□ 1.08
CDK4-215ENST00000553237 MAP2P11137 1827 aaKnown RBP21.81■■□□□ 1.08
CDK4-215ENST00000553237 ZBTB7AO95365 584 aa21.81■■□□□ 1.08
CDK4-215ENST00000553237 EYA1Q99502 592 aa21.81■■□□□ 1.08
CDK4-215ENST00000553237 SHANK3Q9BYB0 1731 aa21.8■■□□□ 1.08
CDK4-215ENST00000553237 KIF7Q2M1P5 1343 aa21.8■■□□□ 1.08
CDK4-215ENST00000553237 KCNQ4P56696 695 aa21.79■■□□□ 1.08
CDK4-215ENST00000553237 MORC1Q86VD1 984 aa21.79■■□□□ 1.08
CDK4-215ENST00000553237 PPP1R1BQ9UD71 204 aaPredicted RBP21.79■■□□□ 1.08
CDK4-215ENST00000553237 KNSTRNQ9Y448 316 aa21.79■■□□□ 1.08
CDK4-215ENST00000553237 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
CDK4-215ENST00000553237 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
CDK4-215ENST00000553237 NSD2O96028 1365 aa21.78■■□□□ 1.08
CDK4-215ENST00000553237 CYP27B1O15528 508 aa21.78■■□□□ 1.08
CDK4-215ENST00000553237 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
CDK4-215ENST00000553237 ZNF827Q17R98 1081 aa21.77■■□□□ 1.08
CDK4-215ENST00000553237 ATF5Q9Y2D1 282 aaPredicted RBP21.77■■□□□ 1.08
CDK4-215ENST00000553237 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
CDK4-215ENST00000553237 SLC27A3Q5K4L6 730 aa21.76■■□□□ 1.07
CDK4-215ENST00000553237 ANKRD26Q9UPS8 1709 aa21.76■■□□□ 1.07
CDK4-215ENST00000553237 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
CDK4-215ENST00000553237 NCAPD2Q15021 1401 aa21.74■■□□□ 1.07
CDK4-215ENST00000553237 SPG7Q9UQ90 795 aa21.74■■□□□ 1.07
CDK4-215ENST00000553237 MPRIPQ6WCQ1 1025 aa21.73■■□□□ 1.07
CDK4-215ENST00000553237 AKT1S1Q96B36 256 aa21.72■■□□□ 1.07
CDK4-215ENST00000553237 PAPPAQ13219 1627 aa21.72■■□□□ 1.07
CDK4-215ENST00000553237 AMER1Q5JTC6 1135 aaPredicted RBP21.71■■□□□ 1.07
CDK4-215ENST00000553237 CCNL1Q9UK58 526 aaPredicted RBP21.71■■□□□ 1.07
CDK4-215ENST00000553237 PTGER2P43116 358 aa21.7■■□□□ 1.06
CDK4-215ENST00000553237 MTFR1LQ9H019 292 aa21.7■■□□□ 1.06
CDK4-215ENST00000553237 NKX1-1Q15270 411 aaPredicted RBP21.68■■□□□ 1.06
CDK4-215ENST00000553237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.68■■□□□ 1.06
CDK4-215ENST00000553237 TFCP2L1Q9NZI6 479 aa21.68■■□□□ 1.06
CDK4-215ENST00000553237 IGSF1Q8N6C5 1336 aa21.67■■□□□ 1.06
CDK4-215ENST00000553237 PKD1L3Q7Z443 1732 aa21.66■■□□□ 1.06
CDK4-215ENST00000553237 PHKG2P15735 406 aa21.66■■□□□ 1.06
CDK4-215ENST00000553237 IFNL2Q8IZJ0 200 aa21.66■■□□□ 1.06
CDK4-215ENST00000553237 PIGBQ92521 554 aa21.66■■□□□ 1.06
CDK4-215ENST00000553237 PER1O15534 1290 aaPredicted RBP21.65■■□□□ 1.06
CDK4-215ENST00000553237 CNGB1Q14028 1251 aaPredicted RBP21.65■■□□□ 1.06
CDK4-215ENST00000553237 LY75O60449 1722 aa21.65■■□□□ 1.06
CDK4-215ENST00000553237 PALLDQ8WX93 1383 aa21.64■■□□□ 1.06
CDK4-215ENST00000553237 PNPLA7Q6ZV29 1317 aa21.64■■□□□ 1.05
CDK4-215ENST00000553237 CC2D1BQ5T0F9 858 aaKnown RBP21.64■■□□□ 1.05
CDK4-215ENST00000553237 AEBP1Q8IUX7 1158 aa21.63■■□□□ 1.05
CDK4-215ENST00000553237 SGIP1Q9BQI5 828 aa21.63■■□□□ 1.05
CDK4-215ENST00000553237 TOGARAM1Q9Y4F4 1720 aa21.63■■□□□ 1.05
CDK4-215ENST00000553237 SMARCC1Q92922 1105 aaPredicted RBP21.62■■□□□ 1.05
CDK4-215ENST00000553237 TMOD3Q9NYL9 352 aa21.62■■□□□ 1.05
CDK4-215ENST00000553237 MSH5O43196 834 aa21.61■■□□□ 1.05
CDK4-215ENST00000553237 IL13P35225 146 aa21.61■■□□□ 1.05
CDK4-215ENST00000553237 MTHFSP49914 203 aa21.61■■□□□ 1.05
CDK4-215ENST00000553237 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
CDK4-215ENST00000553237 SULT6B1Q6IMI4 303 aa21.61■■□□□ 1.05
CDK4-215ENST00000553237 SLC16A10Q8TF71 515 aa21.6■■□□□ 1.05
CDK4-215ENST00000553237 ARXQ96QS3 562 aa21.6■■□□□ 1.05
CDK4-215ENST00000553237 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
CDK4-215ENST00000553237 ITGB4P16144 1822 aa21.59■■□□□ 1.05
CDK4-215ENST00000553237 ZNF530Q6P9A1 599 aaPredicted RBP21.59■■□□□ 1.05
CDK4-215ENST00000553237 ASAP1Q9ULH1 1129 aa21.59■■□□□ 1.05
CDK4-215ENST00000553237 COL23A1Q86Y22 540 aaPredicted RBP21.58■■□□□ 1.05
CDK4-215ENST00000553237 DCAF8L1A6NGE4 600 aa21.57■■□□□ 1.04
CDK4-215ENST00000553237 AMOTQ4VCS5 1084 aa21.57■■□□□ 1.04
CDK4-215ENST00000553237 SYT17Q9BSW7 474 aa21.57■■□□□ 1.04
CDK4-215ENST00000553237 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
CDK4-215ENST00000553237 HSP90AB1P08238 724 aaKnown RBP21.55■■□□□ 1.04
CDK4-215ENST00000553237 POLD1P28340 1107 aa21.55■■□□□ 1.04
CDK4-215ENST00000553237 SIK1P57059 783 aa21.55■■□□□ 1.04
CDK4-215ENST00000553237 ATG3Q9NT62 314 aa21.55■■□□□ 1.04
CDK4-215ENST00000553237 PLEKHG2Q9H7P9 1386 aa21.55■■□□□ 1.04
CDK4-215ENST00000553237 TUBGCP6Q96RT7 1819 aa21.55■■□□□ 1.04
CDK4-215ENST00000553237 DCAF5Q96JK2 942 aa21.54■■□□□ 1.04
CDK4-215ENST00000553237 QSER1Q2KHR3 1735 aa21.54■■□□□ 1.04
CDK4-215ENST00000553237 ERVV-2B6SEH9 535 aa21.53■■□□□ 1.04
CDK4-215ENST00000553237 HMOX1P09601 288 aa21.53■■□□□ 1.04
CDK4-215ENST00000553237 HMGB2P26583 209 aaKnown RBP21.53■■□□□ 1.04
CDK4-215ENST00000553237 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
CDK4-215ENST00000553237 SMIM5Q71RC9 77 aa21.53■■□□□ 1.04
CDK4-215ENST00000553237 KLHL34Q8N239 644 aa21.53■■□□□ 1.04
CDK4-215ENST00000553237 MSL1Q68DK7 614 aa21.52■■□□□ 1.04
CDK4-215ENST00000553237 AK7Q96M32 723 aa21.52■■□□□ 1.04
CDK4-215ENST00000553237 C5P01031 1676 aa21.52■■□□□ 1.04
CDK4-215ENST00000553237 KDRP35968 1356 aa21.51■■□□□ 1.03
CDK4-215ENST00000553237 DIAPH1O60610 1272 aaKnown RBP21.51■■□□□ 1.03
CDK4-215ENST00000553237 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
CDK4-215ENST00000553237 CABP4P57796 275 aa21.51■■□□□ 1.03
CDK4-215ENST00000553237 ITPK1Q13572 414 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms