RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 CABP1Q9NZU7 370 aa7.09□□□□□ -1.27
TMEM106C-221ENST00000553217 CIZ1Q9ULV3 898 aaPredicted RBP7.09□□□□□ -1.27
TMEM106C-221ENST00000553217 CCDC61Q9Y6R9 512 aa7.09□□□□□ -1.27
TMEM106C-221ENST00000553217 LRP5O75197 1615 aa7.09□□□□□ -1.28
TMEM106C-221ENST00000553217 NUP188Q5SRE5 1749 aa7.08□□□□□ -1.28
TMEM106C-221ENST00000553217 APBA3O96018 575 aa7.08□□□□□ -1.28
TMEM106C-221ENST00000553217 NPM2Q86SE8 214 aaKnown RBP7.08□□□□□ -1.28
TMEM106C-221ENST00000553217 GBP4Q96PP9 640 aa7.08□□□□□ -1.28
TMEM106C-221ENST00000553217 COL5A2P05997 1499 aaPredicted RBP7.08□□□□□ -1.28
TMEM106C-221ENST00000553217 TRPM1Q7Z4N2 1603 aa7.08□□□□□ -1.28
TMEM106C-221ENST00000553217 USP19O94966 1318 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 KIF16BQ96L93 1317 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 PLEKHG3A1L390 1219 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 GCP02774 474 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 NLRP6P59044 892 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 NAP1L5Q96NT1 182 aaPredicted RBP7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 CAMKK2Q96RR4 588 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 ZMYND15Q9H091 742 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 CHMP4BQ9H444 224 aaKnown RBP7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 AXIN2Q9Y2T1 843 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 LAS1LQ9Y4W2 734 aaKnown RBP7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 LRRC37A3O60309 1634 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 USP6P35125 1406 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 PARD3Q8TEW0 1356 aa7.07□□□□□ -1.28
TMEM106C-221ENST00000553217 RREB1Q92766 1687 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 COL18A1P39060 1754 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 CCDC173Q0VFZ6 552 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 PDE3AQ14432 1141 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 VSIG10Q8N0Z9 540 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 TCP11L2Q8N4U5 519 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 PDGFDQ9GZP0 370 aaPredicted RBP7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 NPC1L1Q9UHC9 1359 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 WNK3Q9BYP7 1800 aa7.06□□□□□ -1.28
TMEM106C-221ENST00000553217 AKAP12Q02952 1782 aa7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 MSNP26038 577 aaKnown RBP7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 FAM193AP78312 1265 aa7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 TOM1L2Q6ZVM7 507 aa7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 SMAP1Q8IYB5 467 aaPredicted RBP7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 CHMP5Q9NZZ3 219 aa7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 SLIT3O75094 1523 aa7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 SRCAPQ6ZRS2 3230 aa7.05□□□□□ -1.28
TMEM106C-221ENST00000553217 PEAK1Q9H792 1746 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 PARP4Q9UKK3 1724 aaKnown RBP7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 KDM2BQ8NHM5 1336 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 SBF2Q86WG5 1849 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 FSD2A1L4K1 749 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 ESPNB1AK53 854 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 UTP14CQ5TAP6 766 aaKnown RBP7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 FAM196AQ6ZSG2 479 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 PODXL2Q9NZ53 605 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 CPDO75976 1380 aa7.04□□□□□ -1.28
TMEM106C-221ENST00000553217 TTC21BQ7Z4L5 1316 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 DISP2A7MBM2 1401 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 CRB1P82279 1406 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 KIF20AO95235 890 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 CT47B1P0C2W7 299 aaPredicted RBP7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 CSB-PGBD3P0DP91 1061 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 FBLN1P23142 703 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 HMGN5P82970 282 aaKnown RBP7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 BARGINQ6ZT62 677 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 NME9Q86XW9 330 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 MARCH10Q8NA82 808 aaPredicted RBP7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 ACSBG1Q96GR2 724 aa7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 RTN4Q9NQC3 1192 aaKnown RBP7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.03□□□□□ -1.28
TMEM106C-221ENST00000553217 EVC2Q86UK5 1308 aa7.02□□□□□ -1.28
TMEM106C-221ENST00000553217 CPSF1Q10570 1443 aaKnown RBP7.02□□□□□ -1.29
TMEM106C-221ENST00000553217 DYNC1I1O14576 645 aa7.02□□□□□ -1.29
TMEM106C-221ENST00000553217 DDB1Q16531 1140 aa7.02□□□□□ -1.29
TMEM106C-221ENST00000553217 CREBRFQ8IUR6 639 aa7.02□□□□□ -1.29
TMEM106C-221ENST00000553217 RNF216Q9NWF9 866 aaPredicted RBP7.02□□□□□ -1.29
TMEM106C-221ENST00000553217 NFAT5O94916 1531 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 MON2Q7Z3U7 1717 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 LTN1O94822 1766 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 CD163L1Q9NR16 1453 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 KCNQ2O43526 872 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 EXOC6Q8TAG9 804 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 OVOS2A0A0G2JMS6 1433 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 OVOS2A0A0J9YW53 1432 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 OVOS2Q6IE36 1432 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
TMEM106C-221ENST00000553217 KAT6BQ8WYB5 2073 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 AATKQ6ZMQ8 1374 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 ARHGEF25Q86VW2 580 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 ZSCAN30Q86W11 494 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 PROM2Q8N271 834 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 LTV1Q96GA3 475 aaPredicted RBP7□□□□□ -1.29
TMEM106C-221ENST00000553217 CARD11Q9BXL7 1154 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 GTPBP4Q9BZE4 634 aaKnown RBP7□□□□□ -1.29
TMEM106C-221ENST00000553217 SLC12A5Q9H2X9 1139 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 ATF5Q9Y2D1 282 aaPredicted RBP7□□□□□ -1.29
TMEM106C-221ENST00000553217 MYOM1P52179 1685 aa7□□□□□ -1.29
TMEM106C-221ENST00000553217 E9PSI1 815 aa6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 FRAT2O75474 233 aaPredicted RBP6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 RBM25P49756 843 aaKnown RBP6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 KCNQ4P56696 695 aa6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 GOLGA2Q08379 1002 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms