RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 RGPD3A6NKT7 1758 aaPredicted RBP7.62□□□□□ -1.19
CKAP4-203ENST00000553039 RGPD4Q7Z3J3 1758 aa7.62□□□□□ -1.19
CKAP4-203ENST00000553039 HTRA3P83110 453 aa7.62□□□□□ -1.19
CKAP4-203ENST00000553039 C1QBPQ07021 282 aaKnown RBP7.62□□□□□ -1.19
CKAP4-203ENST00000553039 USP6P35125 1406 aa7.61□□□□□ -1.19
CKAP4-203ENST00000553039 USP19O94966 1318 aa7.61□□□□□ -1.19
CKAP4-203ENST00000553039 COL23A1Q86Y22 540 aaPredicted RBP7.61□□□□□ -1.19
CKAP4-203ENST00000553039 HOMEZQ8IX15 550 aa7.61□□□□□ -1.19
CKAP4-203ENST00000553039 KCNH5Q8NCM2 988 aa7.61□□□□□ -1.19
CKAP4-203ENST00000553039 SMC1BQ8NDV3 1235 aa7.61□□□□□ -1.19
CKAP4-203ENST00000553039 AXIN2Q9Y2T1 843 aa7.61□□□□□ -1.19
CKAP4-203ENST00000553039 KDM2BQ8NHM5 1336 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 RIOK3O14730 519 aaKnown RBP7.6□□□□□ -1.19
CKAP4-203ENST00000553039 ABCB7O75027 752 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 ARHGAP27Q6ZUM4 889 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 STAC3Q96MF2 364 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 NMRK2Q9NPI5 230 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 PRDM10Q9NQV6 1147 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 ABCA3Q99758 1704 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 COL5A2P05997 1499 aaPredicted RBP7.6□□□□□ -1.19
CKAP4-203ENST00000553039 PIK3C2GO75747 1445 aa7.6□□□□□ -1.19
CKAP4-203ENST00000553039 CCDC7Q96M83 1385 aa7.59□□□□□ -1.19
CKAP4-203ENST00000553039 IL2RBP14784 551 aa7.59□□□□□ -1.19
CKAP4-203ENST00000553039 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
CKAP4-203ENST00000553039 ALS2Q96Q42 1657 aa7.59□□□□□ -1.19
CKAP4-203ENST00000553039 RGPD8O14715 1765 aaPredicted RBP7.59□□□□□ -1.2
CKAP4-203ENST00000553039 POLR3AO14802 1390 aaPredicted RBP7.59□□□□□ -1.2
CKAP4-203ENST00000553039 IGSF1Q8N6C5 1336 aa7.58□□□□□ -1.2
CKAP4-203ENST00000553039 MSL1Q68DK7 614 aa7.58□□□□□ -1.2
CKAP4-203ENST00000553039 ARHGEF25Q86VW2 580 aa7.58□□□□□ -1.2
CKAP4-203ENST00000553039 SYTL4Q96C24 671 aaPredicted RBP7.58□□□□□ -1.2
CKAP4-203ENST00000553039 NLRP2Q9NX02 1062 aa7.58□□□□□ -1.2
CKAP4-203ENST00000553039 CCNL1Q9UK58 526 aaPredicted RBP7.58□□□□□ -1.2
CKAP4-203ENST00000553039 PRIM1P49642 420 aaKnown RBP7.57□□□□□ -1.2
CKAP4-203ENST00000553039 TGFB2P61812 414 aa7.57□□□□□ -1.2
CKAP4-203ENST00000553039 FAM161AQ3B820 660 aa7.57□□□□□ -1.2
CKAP4-203ENST00000553039 DDX54Q8TDD1 881 aaKnown RBP7.57□□□□□ -1.2
CKAP4-203ENST00000553039 AIDAQ96BJ3 306 aa7.57□□□□□ -1.2
CKAP4-203ENST00000553039 RRAGCQ9HB90 399 aa7.57□□□□□ -1.2
CKAP4-203ENST00000553039 RYDENQ9NUL5 291 aaKnown RBP7.57□□□□□ -1.2
CKAP4-203ENST00000553039 TRPM3Q9HCF6 1732 aaPredicted RBP7.57□□□□□ -1.2
CKAP4-203ENST00000553039 PARP4Q9UKK3 1724 aaKnown RBP7.57□□□□□ -1.2
CKAP4-203ENST00000553039 PEAK1Q9H792 1746 aa7.56□□□□□ -1.2
CKAP4-203ENST00000553039 SPATA31E1Q6ZUB1 1445 aa7.56□□□□□ -1.2
CKAP4-203ENST00000553039 CTCFP49711 727 aaPredicted RBP7.56□□□□□ -1.2
CKAP4-203ENST00000553039 KCNQ4P56696 695 aa7.56□□□□□ -1.2
CKAP4-203ENST00000553039 TULP4Q9NRJ4 1543 aa7.56□□□□□ -1.2
CKAP4-203ENST00000553039 NUBP1P53384 320 aa7.55□□□□□ -1.2
CKAP4-203ENST00000553039 SRPK2P78362 688 aaKnown RBP7.55□□□□□ -1.2
CKAP4-203ENST00000553039 MPHOSPH9Q99550 1183 aa7.55□□□□□ -1.2
CKAP4-203ENST00000553039 BCS1LQ9Y276 419 aa7.55□□□□□ -1.2
CKAP4-203ENST00000553039 PPLO60437 1756 aa7.55□□□□□ -1.2
CKAP4-203ENST00000553039 VEGFAP15692 232 aaPredicted RBP7.54□□□□□ -1.2
CKAP4-203ENST00000553039 RGS19P49795 217 aa7.54□□□□□ -1.2
CKAP4-203ENST00000553039 C9orf131Q5VYM1 1079 aa7.54□□□□□ -1.2
CKAP4-203ENST00000553039 KNDC1Q76NI1 1749 aa7.54□□□□□ -1.2
CKAP4-203ENST00000553039 SBF2Q86WG5 1849 aa7.54□□□□□ -1.2
CKAP4-203ENST00000553039 ABHD8Q96I13 439 aa7.53□□□□□ -1.2
CKAP4-203ENST00000553039 IFT172Q9UG01 1749 aa7.52□□□□□ -1.2
CKAP4-203ENST00000553039 FCHSD2O94868 740 aa7.52□□□□□ -1.21
CKAP4-203ENST00000553039 CHRM1P11229 460 aaPredicted RBP7.52□□□□□ -1.21
CKAP4-203ENST00000553039 CABP1Q9NZU7 370 aa7.52□□□□□ -1.21
CKAP4-203ENST00000553039 PPIP5K1Q6PFW1 1433 aa7.52□□□□□ -1.21
CKAP4-203ENST00000553039 KAT6BQ8WYB5 2073 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 USP47Q96K76 1375 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 PLEKHG2Q9H7P9 1386 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 CCDC85CA6NKD9 419 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 STK25O00506 426 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 SOX12O15370 315 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.51□□□□□ -1.21
CKAP4-203ENST00000553039 DCAF11Q8TEB1 546 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 AK7Q96M32 723 aa7.51□□□□□ -1.21
CKAP4-203ENST00000553039 A0A0G2JLW4 131 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 FOXN1O15353 648 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 DSG3P32926 999 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 NLGN1Q8N2Q7 840 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 CREBZFQ9NS37 354 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 PIM2Q9P1W9 311 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 TNS2Q63HR2 1409 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 LMO7Q8WWI1 1683 aa7.5□□□□□ -1.21
CKAP4-203ENST00000553039 PHRF1Q9P1Y6 1649 aaKnown RBP7.49□□□□□ -1.21
CKAP4-203ENST00000553039 DPY19L2Q6NUT2 758 aa7.49□□□□□ -1.21
CKAP4-203ENST00000553039 ZCRB1Q8TBF4 217 aaKnown RBP7.49□□□□□ -1.21
CKAP4-203ENST00000553039 SMARCC1Q92922 1105 aaPredicted RBP7.49□□□□□ -1.21
CKAP4-203ENST00000553039 CABP2Q9NPB3 220 aa7.49□□□□□ -1.21
CKAP4-203ENST00000553039 RNF181Q9P0P0 153 aa7.49□□□□□ -1.21
CKAP4-203ENST00000553039 CRYBG1Q9Y4K1 1723 aa7.49□□□□□ -1.21
CKAP4-203ENST00000553039 GOLGB1Q14789 3259 aaKnown RBP7.49□□□□□ -1.21
CKAP4-203ENST00000553039 LRRC37A3O60309 1634 aa7.49□□□□□ -1.21
CKAP4-203ENST00000553039 ANKRD36BQ8N2N9 1353 aa7.48□□□□□ -1.21
CKAP4-203ENST00000553039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.48□□□□□ -1.21
CKAP4-203ENST00000553039 SSFA2P28290 1259 aa7.48□□□□□ -1.21
CKAP4-203ENST00000553039 LBX1P52954 281 aa7.48□□□□□ -1.21
CKAP4-203ENST00000553039 DALRD3Q5D0E6 543 aaKnown RBP7.48□□□□□ -1.21
CKAP4-203ENST00000553039 ANKRD24Q8TF21 1146 aa7.48□□□□□ -1.21
CKAP4-203ENST00000553039 CCDC87Q9NVE4 849 aa7.48□□□□□ -1.21
CKAP4-203ENST00000553039 MKRN1Q9UHC7 482 aaKnown RBP7.48□□□□□ -1.21
CKAP4-203ENST00000553039 ZC3H4Q9UPT8 1303 aaKnown RBP7.48□□□□□ -1.21
CKAP4-203ENST00000553039 TOPAZ1Q8N9V7 1692 aa7.47□□□□□ -1.21
CKAP4-203ENST00000553039 ARHGEF28Q8N1W1 1705 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms