RNA–Protein interactions for RNA: ENST00000552917.1

RFX4-212, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-212ENST00000552917 TXNRD1Q16881 649 aa16.73■□□□□ 0.27
RFX4-212ENST00000552917 AMER1Q5JTC6 1135 aaPredicted RBP16.73■□□□□ 0.27
RFX4-212ENST00000552917 EYA1Q99502 592 aa16.72■□□□□ 0.27
RFX4-212ENST00000552917 RREB1Q92766 1687 aa16.72■□□□□ 0.27
RFX4-212ENST00000552917 RGPD2P0DJD1 1756 aa16.72■□□□□ 0.27
RFX4-212ENST00000552917 ANKRD26Q9UPS8 1709 aa16.71■□□□□ 0.27
RFX4-212ENST00000552917 PER1O15534 1290 aaPredicted RBP16.71■□□□□ 0.27
RFX4-212ENST00000552917 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
RFX4-212ENST00000552917 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
RFX4-212ENST00000552917 RGPD3A6NKT7 1758 aaPredicted RBP16.7■□□□□ 0.26
RFX4-212ENST00000552917 RGPD4Q7Z3J3 1758 aa16.7■□□□□ 0.26
RFX4-212ENST00000552917 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
RFX4-212ENST00000552917 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
RFX4-212ENST00000552917 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
RFX4-212ENST00000552917 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
RFX4-212ENST00000552917 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
RFX4-212ENST00000552917 NUP188Q5SRE5 1749 aa16.69■□□□□ 0.26
RFX4-212ENST00000552917 MAP2P11137 1827 aaKnown RBP16.68■□□□□ 0.26
RFX4-212ENST00000552917 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
RFX4-212ENST00000552917 CYP27B1O15528 508 aa16.67■□□□□ 0.26
RFX4-212ENST00000552917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
RFX4-212ENST00000552917 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
RFX4-212ENST00000552917 IGSF1Q8N6C5 1336 aa16.66■□□□□ 0.26
RFX4-212ENST00000552917 CC2D1BQ5T0F9 858 aaKnown RBP16.65■□□□□ 0.26
RFX4-212ENST00000552917 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
RFX4-212ENST00000552917 SHANK3Q9BYB0 1731 aa16.64■□□□□ 0.25
RFX4-212ENST00000552917 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.25
RFX4-212ENST00000552917 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
RFX4-212ENST00000552917 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
RFX4-212ENST00000552917 SLC27A3Q5K4L6 730 aa16.63■□□□□ 0.25
RFX4-212ENST00000552917 LRP5O75197 1615 aa16.63■□□□□ 0.25
RFX4-212ENST00000552917 PLEKHG2Q9H7P9 1386 aa16.63■□□□□ 0.25
RFX4-212ENST00000552917 BTAF1O14981 1849 aa16.62■□□□□ 0.25
RFX4-212ENST00000552917 MTHFSP49914 203 aa16.62■□□□□ 0.25
RFX4-212ENST00000552917 LRRC4BQ9NT99 713 aa16.62■□□□□ 0.25
RFX4-212ENST00000552917 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
RFX4-212ENST00000552917 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
RFX4-212ENST00000552917 PHKG2P15735 406 aa16.6■□□□□ 0.25
RFX4-212ENST00000552917 IL13P35225 146 aa16.6■□□□□ 0.25
RFX4-212ENST00000552917 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
RFX4-212ENST00000552917 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
RFX4-212ENST00000552917 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
RFX4-212ENST00000552917 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
RFX4-212ENST00000552917 PLEKHO1Q53GL0 409 aaPredicted RBP16.59■□□□□ 0.25
RFX4-212ENST00000552917 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
RFX4-212ENST00000552917 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
RFX4-212ENST00000552917 SULT6B1Q6IMI4 303 aa16.58■□□□□ 0.24
RFX4-212ENST00000552917 AEBP1Q8IUX7 1158 aa16.58■□□□□ 0.24
RFX4-212ENST00000552917 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.24
RFX4-212ENST00000552917 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
RFX4-212ENST00000552917 CCNL1Q9UK58 526 aaPredicted RBP16.57■□□□□ 0.24
RFX4-212ENST00000552917 KDRP35968 1356 aa16.56■□□□□ 0.24
RFX4-212ENST00000552917 KCNQ4P56696 695 aa16.56■□□□□ 0.24
RFX4-212ENST00000552917 PIGBQ92521 554 aa16.56■□□□□ 0.24
RFX4-212ENST00000552917 SMARCC1Q92922 1105 aaPredicted RBP16.56■□□□□ 0.24
RFX4-212ENST00000552917 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
RFX4-212ENST00000552917 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
RFX4-212ENST00000552917 ZBTB7AO95365 584 aa16.55■□□□□ 0.24
RFX4-212ENST00000552917 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
RFX4-212ENST00000552917 HMGB2P26583 209 aaKnown RBP16.55■□□□□ 0.24
RFX4-212ENST00000552917 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
RFX4-212ENST00000552917 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
RFX4-212ENST00000552917 ZNF530Q6P9A1 599 aaPredicted RBP16.54■□□□□ 0.24
RFX4-212ENST00000552917 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
RFX4-212ENST00000552917 PAPPAQ13219 1627 aa16.54■□□□□ 0.24
RFX4-212ENST00000552917 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
RFX4-212ENST00000552917 TFCP2L1Q9NZI6 479 aa16.53■□□□□ 0.24
RFX4-212ENST00000552917 PPP1R1BQ9UD71 204 aaPredicted RBP16.53■□□□□ 0.24
RFX4-212ENST00000552917 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
RFX4-212ENST00000552917 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
RFX4-212ENST00000552917 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
RFX4-212ENST00000552917 CASZ1Q86V15 1759 aa16.51■□□□□ 0.23
RFX4-212ENST00000552917 HMOX1P09601 288 aa16.51■□□□□ 0.23
RFX4-212ENST00000552917 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
RFX4-212ENST00000552917 PTGER2P43116 358 aa16.5■□□□□ 0.23
RFX4-212ENST00000552917 LY75O60449 1722 aa16.5■□□□□ 0.23
RFX4-212ENST00000552917 SLC16A10Q8TF71 515 aa16.49■□□□□ 0.23
RFX4-212ENST00000552917 CFAP53Q96M91 514 aa16.49■□□□□ 0.23
RFX4-212ENST00000552917 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
RFX4-212ENST00000552917 PNPLA7Q6ZV29 1317 aa16.48■□□□□ 0.23
RFX4-212ENST00000552917 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
RFX4-212ENST00000552917 SIK1P57059 783 aa16.48■□□□□ 0.23
RFX4-212ENST00000552917 CABP4P57796 275 aa16.48■□□□□ 0.23
RFX4-212ENST00000552917 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
RFX4-212ENST00000552917 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
RFX4-212ENST00000552917 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
RFX4-212ENST00000552917 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
RFX4-212ENST00000552917 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
RFX4-212ENST00000552917 AKAP4Q5JQC9 854 aa16.47■□□□□ 0.23
RFX4-212ENST00000552917 SGIP1Q9BQI5 828 aa16.46■□□□□ 0.23
RFX4-212ENST00000552917 ITGB4P16144 1822 aa16.45■□□□□ 0.22
RFX4-212ENST00000552917 ATP6V1AP38606 617 aa16.44■□□□□ 0.22
RFX4-212ENST00000552917 MTHFSDQ2M296 383 aaKnown RBP16.44■□□□□ 0.22
RFX4-212ENST00000552917 COL23A1Q86Y22 540 aaPredicted RBP16.44■□□□□ 0.22
RFX4-212ENST00000552917 NFATC2IPQ8NCF5 419 aa16.44■□□□□ 0.22
RFX4-212ENST00000552917 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
RFX4-212ENST00000552917 AK7Q96M32 723 aa16.44■□□□□ 0.22
RFX4-212ENST00000552917 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
RFX4-212ENST00000552917 MSH5O43196 834 aa16.43■□□□□ 0.22
RFX4-212ENST00000552917 POLD1P28340 1107 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms