RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 MAP3K5Q99683 1374 aa13.88□□□□□ -0.19
LINC00661-207ENST00000552685 TMF1P82094 1093 aa13.88□□□□□ -0.19
LINC00661-207ENST00000552685 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
LINC00661-207ENST00000552685 MEGF6O75095 1541 aa13.88□□□□□ -0.19
LINC00661-207ENST00000552685 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
LINC00661-207ENST00000552685 DOT1LQ8TEK3 1739 aa13.87□□□□□ -0.19
LINC00661-207ENST00000552685 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
LINC00661-207ENST00000552685 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
LINC00661-207ENST00000552685 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
LINC00661-207ENST00000552685 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
LINC00661-207ENST00000552685 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
LINC00661-207ENST00000552685 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
LINC00661-207ENST00000552685 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
LINC00661-207ENST00000552685 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
LINC00661-207ENST00000552685 HSP90AB2PQ58FF8 381 aa13.84□□□□□ -0.19
LINC00661-207ENST00000552685 CARD14Q9BXL6 1004 aa13.84□□□□□ -0.19
LINC00661-207ENST00000552685 PNPLA7Q6ZV29 1317 aa13.84□□□□□ -0.19
LINC00661-207ENST00000552685 CHD4Q14839 1912 aa13.84□□□□□ -0.19
LINC00661-207ENST00000552685 RTL1A6NKG5 1358 aa13.83□□□□□ -0.19
LINC00661-207ENST00000552685 ARXQ96QS3 562 aa13.83□□□□□ -0.2
LINC00661-207ENST00000552685 LY75O60449 1722 aa13.83□□□□□ -0.2
LINC00661-207ENST00000552685 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
LINC00661-207ENST00000552685 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
LINC00661-207ENST00000552685 PCGF6Q9BYE7 350 aa13.81□□□□□ -0.2
LINC00661-207ENST00000552685 EMILIN1Q9Y6C2 1016 aa13.81□□□□□ -0.2
LINC00661-207ENST00000552685 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
LINC00661-207ENST00000552685 NLGN2Q8NFZ4 835 aa13.8□□□□□ -0.2
LINC00661-207ENST00000552685 RAPGEF4Q8WZA2 1011 aa13.8□□□□□ -0.2
LINC00661-207ENST00000552685 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
LINC00661-207ENST00000552685 TFCP2L1Q9NZI6 479 aa13.8□□□□□ -0.2
LINC00661-207ENST00000552685 INSRP06213 1382 aa13.8□□□□□ -0.2
LINC00661-207ENST00000552685 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
LINC00661-207ENST00000552685 CEP350Q5VT06 3117 aa13.79□□□□□ -0.2
LINC00661-207ENST00000552685 TATP17735 454 aaPredicted RBP13.79□□□□□ -0.2
LINC00661-207ENST00000552685 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
LINC00661-207ENST00000552685 CCNL1Q9UK58 526 aaPredicted RBP13.79□□□□□ -0.2
LINC00661-207ENST00000552685 FLT4P35916 1363 aa13.79□□□□□ -0.2
LINC00661-207ENST00000552685 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
LINC00661-207ENST00000552685 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
LINC00661-207ENST00000552685 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
LINC00661-207ENST00000552685 CYP27B1O15528 508 aa13.76□□□□□ -0.21
LINC00661-207ENST00000552685 MSH5O43196 834 aa13.76□□□□□ -0.21
LINC00661-207ENST00000552685 YBX3P16989 372 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC00661-207ENST00000552685 C1QTNF8P60827 252 aa13.76□□□□□ -0.21
LINC00661-207ENST00000552685 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
LINC00661-207ENST00000552685 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
LINC00661-207ENST00000552685 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
LINC00661-207ENST00000552685 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
LINC00661-207ENST00000552685 POLD1P28340 1107 aa13.74□□□□□ -0.21
LINC00661-207ENST00000552685 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
LINC00661-207ENST00000552685 AMIGO3Q86WK7 504 aa13.74□□□□□ -0.21
LINC00661-207ENST00000552685 COL23A1Q86Y22 540 aaPredicted RBP13.74□□□□□ -0.21
LINC00661-207ENST00000552685 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
LINC00661-207ENST00000552685 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
LINC00661-207ENST00000552685 GPR162Q16538 588 aa13.73□□□□□ -0.21
LINC00661-207ENST00000552685 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
LINC00661-207ENST00000552685 ITGB4P16144 1822 aa13.73□□□□□ -0.21
LINC00661-207ENST00000552685 C5P01031 1676 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 KIF24Q5T7B8 1368 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 PALLDQ8WX93 1383 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 EYA1Q99502 592 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 PKD1L3Q7Z443 1732 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
LINC00661-207ENST00000552685 PIGBQ92521 554 aa13.71□□□□□ -0.21
LINC00661-207ENST00000552685 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
LINC00661-207ENST00000552685 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
LINC00661-207ENST00000552685 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.22
LINC00661-207ENST00000552685 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
LINC00661-207ENST00000552685 NCAPD2Q15021 1401 aa13.7□□□□□ -0.22
LINC00661-207ENST00000552685 HSPA5P11021 654 aaKnown RBP13.69□□□□□ -0.22
LINC00661-207ENST00000552685 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
LINC00661-207ENST00000552685 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
LINC00661-207ENST00000552685 ADCY9O60503 1353 aa13.68□□□□□ -0.22
LINC00661-207ENST00000552685 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
LINC00661-207ENST00000552685 PHF14O94880 888 aa13.67□□□□□ -0.22
LINC00661-207ENST00000552685 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
LINC00661-207ENST00000552685 PANK3Q9H999 370 aa13.67□□□□□ -0.22
LINC00661-207ENST00000552685 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
LINC00661-207ENST00000552685 EIF4G2P78344 907 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC00661-207ENST00000552685 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
LINC00661-207ENST00000552685 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
LINC00661-207ENST00000552685 AK7Q96M32 723 aa13.66□□□□□ -0.22
LINC00661-207ENST00000552685 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
LINC00661-207ENST00000552685 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
LINC00661-207ENST00000552685 ATP10DQ9P241 1426 aa13.65□□□□□ -0.22
LINC00661-207ENST00000552685 PHKG2P15735 406 aa13.65□□□□□ -0.22
LINC00661-207ENST00000552685 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
LINC00661-207ENST00000552685 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
LINC00661-207ENST00000552685 SIK1P57059 783 aa13.64□□□□□ -0.23
LINC00661-207ENST00000552685 ITPK1Q13572 414 aa13.64□□□□□ -0.23
LINC00661-207ENST00000552685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
LINC00661-207ENST00000552685 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
LINC00661-207ENST00000552685 IFNL2Q8IZJ0 200 aa13.63□□□□□ -0.23
LINC00661-207ENST00000552685 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
LINC00661-207ENST00000552685 WWC3Q9ULE0 1092 aa13.63□□□□□ -0.23
LINC00661-207ENST00000552685 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
LINC00661-207ENST00000552685 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
LINC00661-207ENST00000552685 ATG3Q9NT62 314 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms