RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 IP6K1Q92551 441 aa21.28■■□□□ 1
LINC02396-204ENST00000552628 GRIN3BO60391 1043 aa21.27■■□□□ 1
LINC02396-204ENST00000552628 AMPHP49418 695 aa21.27■■□□□ 1
LINC02396-204ENST00000552628 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
LINC02396-204ENST00000552628 CD163L1Q9NR16 1453 aa21.26■□□□□ 0.99
LINC02396-204ENST00000552628 ZCRB1Q8TBF4 217 aaKnown RBP21.25■□□□□ 0.99
LINC02396-204ENST00000552628 LTN1O94822 1766 aa21.25■□□□□ 0.99
LINC02396-204ENST00000552628 PAPPAQ13219 1627 aa21.25■□□□□ 0.99
LINC02396-204ENST00000552628 USP54Q70EL1 1684 aa21.24■□□□□ 0.99
LINC02396-204ENST00000552628 COG3Q96JB2 828 aa21.24■□□□□ 0.99
LINC02396-204ENST00000552628 TMF1P82094 1093 aa21.22■□□□□ 0.99
LINC02396-204ENST00000552628 MSL1Q68DK7 614 aa21.22■□□□□ 0.99
LINC02396-204ENST00000552628 EDC4Q6P2E9 1401 aaKnown RBP21.21■□□□□ 0.99
LINC02396-204ENST00000552628 ANKRD36BQ8N2N9 1353 aa21.21■□□□□ 0.99
LINC02396-204ENST00000552628 UTRNP46939 3433 aa21.2■□□□□ 0.98
LINC02396-204ENST00000552628 YBX3P16989 372 aaKnown RBP eCLIP21.2■□□□□ 0.98
LINC02396-204ENST00000552628 FBLN1P23142 703 aa21.2■□□□□ 0.98
LINC02396-204ENST00000552628 IFFO2Q5TF58 517 aa21.2■□□□□ 0.98
LINC02396-204ENST00000552628 COL23A1Q86Y22 540 aaPredicted RBP21.2■□□□□ 0.98
LINC02396-204ENST00000552628 HOXC9P31274 260 aa21.19■□□□□ 0.98
LINC02396-204ENST00000552628 CDCA8Q53HL2 280 aa21.19■□□□□ 0.98
LINC02396-204ENST00000552628 A0A1W2PP64 1363 aa21.18■□□□□ 0.98
LINC02396-204ENST00000552628 MAP3K19Q56UN5 1328 aa21.16■□□□□ 0.98
LINC02396-204ENST00000552628 ZNF526Q8TF50 670 aaPredicted RBP21.16■□□□□ 0.98
LINC02396-204ENST00000552628 RAPGEF4Q8WZA2 1011 aa21.16■□□□□ 0.98
LINC02396-204ENST00000552628 GPBP1L1Q9HC44 474 aaPredicted RBP21.16■□□□□ 0.98
LINC02396-204ENST00000552628 USHBP1Q8N6Y0 703 aa21.15■□□□□ 0.98
LINC02396-204ENST00000552628 HMGB2P26583 209 aaKnown RBP21.14■□□□□ 0.97
LINC02396-204ENST00000552628 TATP17735 454 aaPredicted RBP21.13■□□□□ 0.97
LINC02396-204ENST00000552628 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.97
LINC02396-204ENST00000552628 MPRIPQ6WCQ1 1025 aa21.13■□□□□ 0.97
LINC02396-204ENST00000552628 RRS1Q15050 365 aaKnown RBP21.12■□□□□ 0.97
LINC02396-204ENST00000552628 NBPF6Q5VWK0 638 aa21.12■□□□□ 0.97
LINC02396-204ENST00000552628 FLAD1Q8NFF5 587 aa21.12■□□□□ 0.97
LINC02396-204ENST00000552628 NBPF4Q96M43 638 aa21.12■□□□□ 0.97
LINC02396-204ENST00000552628 WWC3Q9ULE0 1092 aa21.12■□□□□ 0.97
LINC02396-204ENST00000552628 CD2APQ9Y5K6 639 aa21.11■□□□□ 0.97
LINC02396-204ENST00000552628 QSER1Q2KHR3 1735 aa21.11■□□□□ 0.97
LINC02396-204ENST00000552628 NSD2O96028 1365 aa21.1■□□□□ 0.97
LINC02396-204ENST00000552628 ATP10DQ9P241 1426 aa21.1■□□□□ 0.97
LINC02396-204ENST00000552628 DOT1LQ8TEK3 1739 aa21.09■□□□□ 0.97
LINC02396-204ENST00000552628 AK7Q96M32 723 aa21.09■□□□□ 0.97
LINC02396-204ENST00000552628 CGNL1Q0VF96 1302 aa21.08■□□□□ 0.97
LINC02396-204ENST00000552628 MEGF6O75095 1541 aa21.08■□□□□ 0.96
LINC02396-204ENST00000552628 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
LINC02396-204ENST00000552628 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
LINC02396-204ENST00000552628 TUBGCP6Q96RT7 1819 aa21.07■□□□□ 0.96
LINC02396-204ENST00000552628 PHF14O94880 888 aa21.07■□□□□ 0.96
LINC02396-204ENST00000552628 GGNBP2Q9H3C7 697 aa21.07■□□□□ 0.96
LINC02396-204ENST00000552628 FAM208AQ9UK61 1670 aaKnown RBP21.07■□□□□ 0.96
LINC02396-204ENST00000552628 HSPA5P11021 654 aaKnown RBP21.06■□□□□ 0.96
LINC02396-204ENST00000552628 LY75O60449 1722 aa21.06■□□□□ 0.96
LINC02396-204ENST00000552628 PCDH11XQ9BZA7 1347 aa21.04■□□□□ 0.96
LINC02396-204ENST00000552628 PCDH11YQ9BZA8 1340 aa21.04■□□□□ 0.96
LINC02396-204ENST00000552628 SMARCC1Q92922 1105 aaPredicted RBP21.04■□□□□ 0.96
LINC02396-204ENST00000552628 PALLDQ8WX93 1383 aa21.04■□□□□ 0.96
LINC02396-204ENST00000552628 COL24A1Q17RW2 1714 aa21.04■□□□□ 0.96
LINC02396-204ENST00000552628 RGPD2P0DJD1 1756 aa21.03■□□□□ 0.96
LINC02396-204ENST00000552628 HSPA6P17066 643 aa21.03■□□□□ 0.96
LINC02396-204ENST00000552628 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
LINC02396-204ENST00000552628 KIF20BQ96Q89 1820 aa21.02■□□□□ 0.96
LINC02396-204ENST00000552628 IGSF1Q8N6C5 1336 aa21.02■□□□□ 0.95
LINC02396-204ENST00000552628 FYB1O15117 783 aa21.01■□□□□ 0.95
LINC02396-204ENST00000552628 SMIM5Q71RC9 77 aa21.01■□□□□ 0.95
LINC02396-204ENST00000552628 RTL1A6NKG5 1358 aa21■□□□□ 0.95
LINC02396-204ENST00000552628 PPM1GO15355 546 aaPredicted RBP21■□□□□ 0.95
LINC02396-204ENST00000552628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.99■□□□□ 0.95
LINC02396-204ENST00000552628 CYP27B1O15528 508 aa20.97■□□□□ 0.95
LINC02396-204ENST00000552628 PIGBQ92521 554 aa20.96■□□□□ 0.95
LINC02396-204ENST00000552628 C5P01031 1676 aa20.96■□□□□ 0.95
LINC02396-204ENST00000552628 SPG7Q9UQ90 795 aa20.95■□□□□ 0.94
LINC02396-204ENST00000552628 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
LINC02396-204ENST00000552628 AMIGO3Q86WK7 504 aa20.94■□□□□ 0.94
LINC02396-204ENST00000552628 INSRP06213 1382 aa20.94■□□□□ 0.94
LINC02396-204ENST00000552628 LOC102724428A0A0B4J2F2 783 aa20.93■□□□□ 0.94
LINC02396-204ENST00000552628 GNPATO15228 680 aa20.93■□□□□ 0.94
LINC02396-204ENST00000552628 SSFA2P28290 1259 aa20.93■□□□□ 0.94
LINC02396-204ENST00000552628 ATP6V1AP38606 617 aa20.93■□□□□ 0.94
LINC02396-204ENST00000552628 SIK1P57059 783 aa20.93■□□□□ 0.94
LINC02396-204ENST00000552628 CARD14Q9BXL6 1004 aa20.93■□□□□ 0.94
LINC02396-204ENST00000552628 TMOD3Q9NYL9 352 aa20.93■□□□□ 0.94
LINC02396-204ENST00000552628 GOLGB1Q14789 3259 aaKnown RBP20.93■□□□□ 0.94
LINC02396-204ENST00000552628 FLT4P35916 1363 aa20.92■□□□□ 0.94
LINC02396-204ENST00000552628 ANKRD26Q9UPS8 1709 aa20.92■□□□□ 0.94
LINC02396-204ENST00000552628 LINC00116Q8NCU8 138 aa20.91■□□□□ 0.94
LINC02396-204ENST00000552628 C4BP0C0L5 1744 aa20.9■□□□□ 0.94
LINC02396-204ENST00000552628 BCS1LQ9Y276 419 aa20.9■□□□□ 0.94
LINC02396-204ENST00000552628 EMILIN1Q9Y6C2 1016 aa20.9■□□□□ 0.94
LINC02396-204ENST00000552628 ADCY9O60503 1353 aa20.89■□□□□ 0.93
LINC02396-204ENST00000552628 MMP10P09238 476 aa20.89■□□□□ 0.93
LINC02396-204ENST00000552628 ARHGAP27Q6ZUM4 889 aa20.89■□□□□ 0.93
LINC02396-204ENST00000552628 KIF24Q5T7B8 1368 aa20.88■□□□□ 0.93
LINC02396-204ENST00000552628 KIF3CO14782 793 aa20.88■□□□□ 0.93
LINC02396-204ENST00000552628 ASAP1Q9ULH1 1129 aa20.88■□□□□ 0.93
LINC02396-204ENST00000552628 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
LINC02396-204ENST00000552628 TAF1LQ8IZX4 1826 aa20.87■□□□□ 0.93
LINC02396-204ENST00000552628 KIF7Q2M1P5 1343 aa20.86■□□□□ 0.93
LINC02396-204ENST00000552628 A0A0G2JLW4 131 aa20.86■□□□□ 0.93
LINC02396-204ENST00000552628 APLP1P51693 650 aa20.86■□□□□ 0.93
LINC02396-204ENST00000552628 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms