RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 SLC15A2Q16348 729 aa12.95□□□□□ -0.34
PRIM1-208ENST00000552590 STK26Q9P289 416 aa12.95□□□□□ -0.34
PRIM1-208ENST00000552590 CHRNA2Q15822 529 aa12.94□□□□□ -0.34
PRIM1-208ENST00000552590 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
PRIM1-208ENST00000552590 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
PRIM1-208ENST00000552590 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
PRIM1-208ENST00000552590 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
PRIM1-208ENST00000552590 NRXN1Q9ULB1 1477 aa12.93□□□□□ -0.34
PRIM1-208ENST00000552590 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
PRIM1-208ENST00000552590 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■□□□□ 9.9
PRIM1-208ENST00000552590 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
PRIM1-208ENST00000552590 NUP155O75694 1391 aa12.91□□□□□ -0.34
PRIM1-208ENST00000552590 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
PRIM1-208ENST00000552590 PMFBP1Q8TBY8 1022 aa12.91□□□□□ -0.34
PRIM1-208ENST00000552590 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
PRIM1-208ENST00000552590 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
PRIM1-208ENST00000552590 KIAA0232Q92628 1395 aa12.9□□□□□ -0.34
PRIM1-208ENST00000552590 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
PRIM1-208ENST00000552590 TCP11L2Q8N4U5 519 aa12.89□□□□□ -0.35
PRIM1-208ENST00000552590 CLTCL1P53675 1640 aa12.89□□□□□ -0.35
PRIM1-208ENST00000552590 EVA1CP58658 441 aa12.88□□□□□ -0.35
PRIM1-208ENST00000552590 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
PRIM1-208ENST00000552590 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
PRIM1-208ENST00000552590 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
PRIM1-208ENST00000552590 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
PRIM1-208ENST00000552590 PEAK1Q9H792 1746 aa12.87□□□□□ -0.35
PRIM1-208ENST00000552590 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
PRIM1-208ENST00000552590 C11orf95C9JLR9 678 aaPredicted RBP12.87□□□□□ -0.35
PRIM1-208ENST00000552590 SOX12O15370 315 aa12.87□□□□□ -0.35
PRIM1-208ENST00000552590 MS4A4AQ96JQ5 239 aa12.87□□□□□ -0.35
PRIM1-208ENST00000552590 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
PRIM1-208ENST00000552590 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
PRIM1-208ENST00000552590 KIF3CO14782 793 aa12.86□□□□□ -0.35
PRIM1-208ENST00000552590 SSH2Q76I76 1423 aa12.86□□□□□ -0.35
PRIM1-208ENST00000552590 CRYBG1Q9Y4K1 1723 aa12.86□□□□□ -0.35
PRIM1-208ENST00000552590 KIF1BO60333 1816 aa12.86□□□□□ -0.35
PRIM1-208ENST00000552590 ADCY9O60503 1353 aa12.86□□□□□ -0.35
PRIM1-208ENST00000552590 IFT172Q9UG01 1749 aa12.85□□□□□ -0.35
PRIM1-208ENST00000552590 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
PRIM1-208ENST00000552590 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
PRIM1-208ENST00000552590 NUDT7P0C024 238 aa12.85□□□□□ -0.35
PRIM1-208ENST00000552590 HTRA3P83110 453 aa12.85□□□□□ -0.35
PRIM1-208ENST00000552590 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
PRIM1-208ENST00000552590 KLRG1Q96E93 195 aa12.84□□□□□ -0.35
PRIM1-208ENST00000552590 PARP4Q9UKK3 1724 aaKnown RBP12.84□□□□□ -0.35
PRIM1-208ENST00000552590 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
PRIM1-208ENST00000552590 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
PRIM1-208ENST00000552590 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
PRIM1-208ENST00000552590 LHX6Q9UPM6 363 aa12.83□□□□□ -0.36
PRIM1-208ENST00000552590 ABCC11Q96J66 1382 aa12.82□□□□□ -0.36
PRIM1-208ENST00000552590 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
PRIM1-208ENST00000552590 RGS20O76081 388 aa12.81□□□□□ -0.36
PRIM1-208ENST00000552590 POLD1P28340 1107 aa12.81□□□□□ -0.36
PRIM1-208ENST00000552590 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
PRIM1-208ENST00000552590 THRAP3Q9Y2W1 955 aaKnown RBP12.81□□□□□ -0.36
PRIM1-208ENST00000552590 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
PRIM1-208ENST00000552590 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
PRIM1-208ENST00000552590 ATP7BP35670 1465 aa12.8□□□□□ -0.36
PRIM1-208ENST00000552590 WDR90Q96KV7 1748 aa12.8□□□□□ -0.36
PRIM1-208ENST00000552590 RPGRIP1LQ68CZ1 1315 aa12.79□□□□□ -0.36
PRIM1-208ENST00000552590 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
PRIM1-208ENST00000552590 PPLO60437 1756 aa12.78□□□□□ -0.36
PRIM1-208ENST00000552590 KNDC1Q76NI1 1749 aa12.78□□□□□ -0.36
PRIM1-208ENST00000552590 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
PRIM1-208ENST00000552590 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
PRIM1-208ENST00000552590 DDB1Q16531 1140 aa12.78□□□□□ -0.36
PRIM1-208ENST00000552590 ZNF827Q17R98 1081 aa12.78□□□□□ -0.36
PRIM1-208ENST00000552590 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.37
PRIM1-208ENST00000552590 TOMM70O94826 608 aa12.77□□□□□ -0.37
PRIM1-208ENST00000552590 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
PRIM1-208ENST00000552590 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
PRIM1-208ENST00000552590 TOPAZ1Q8N9V7 1692 aa12.76□□□□□ -0.37
PRIM1-208ENST00000552590 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
PRIM1-208ENST00000552590 LRRC37A3O60309 1634 aa12.76□□□□□ -0.37
PRIM1-208ENST00000552590 PHRF1Q9P1Y6 1649 aaKnown RBP12.76□□□□□ -0.37
PRIM1-208ENST00000552590 SLC16A10Q8TF71 515 aa12.74□□□□□ -0.37
PRIM1-208ENST00000552590 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
PRIM1-208ENST00000552590 YTHDC2Q9H6S0 1430 aaKnown RBP12.74□□□□□ -0.37
PRIM1-208ENST00000552590 PAPPAQ13219 1627 aa12.74□□□□□ -0.37
PRIM1-208ENST00000552590 COL24A1Q17RW2 1714 aa12.73□□□□□ -0.37
PRIM1-208ENST00000552590 TK2O00142 265 aa12.73□□□□□ -0.37
PRIM1-208ENST00000552590 HRO43593 1189 aa12.72□□□□□ -0.37
PRIM1-208ENST00000552590 HSPA1AP0DMV8 641 aaKnown RBP12.72□□□□□ -0.37
PRIM1-208ENST00000552590 HSPA1BP0DMV9 641 aaKnown RBP12.72□□□□□ -0.37
PRIM1-208ENST00000552590 NGDNQ8NEJ9 315 aaKnown RBP12.72□□□□□ -0.37
PRIM1-208ENST00000552590 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
PRIM1-208ENST00000552590 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
PRIM1-208ENST00000552590 BCL9O00512 1426 aa12.72□□□□□ -0.37
PRIM1-208ENST00000552590 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
PRIM1-208ENST00000552590 TNS2Q63HR2 1409 aa12.71□□□□□ -0.38
PRIM1-208ENST00000552590 FAM161AQ3B820 660 aa12.71□□□□□ -0.38
PRIM1-208ENST00000552590 PCDHGA4Q9Y5G9 962 aa12.71□□□□□ -0.38
PRIM1-208ENST00000552590 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
PRIM1-208ENST00000552590 CRB1P82279 1406 aa12.7□□□□□ -0.38
PRIM1-208ENST00000552590 PRAM1Q96QH2 718 aa12.7□□□□□ -0.38
PRIM1-208ENST00000552590 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
PRIM1-208ENST00000552590 AKAP12Q02952 1782 aa12.7□□□□□ -0.38
PRIM1-208ENST00000552590 ARHGEF28Q8N1W1 1705 aaKnown RBP12.7□□□□□ -0.38
PRIM1-208ENST00000552590 COL5A2P05997 1499 aaPredicted RBP12.69□□□□□ -0.38
PRIM1-208ENST00000552590 PNPLA7Q6ZV29 1317 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms