RNA–Protein interactions for RNA: ENST00000552239.1

TMCC3-204, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 4

Gene TMCC3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-204ENST00000552239 SHANK3Q9BYB0 1731 aa15.17■□□□□ 0.02
TMCC3-204ENST00000552239 NHSQ6T4R5 1651 aa15.17■□□□□ 0.02
TMCC3-204ENST00000552239 NBPF14Q5TI25 921 aa15.17■□□□□ 0.02
TMCC3-204ENST00000552239 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
TMCC3-204ENST00000552239 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
TMCC3-204ENST00000552239 TATP17735 454 aaPredicted RBP15.16■□□□□ 0.02
TMCC3-204ENST00000552239 MORC1Q86VD1 984 aa15.16■□□□□ 0.02
TMCC3-204ENST00000552239 TXNRD1Q16881 649 aa15.15■□□□□ 0.02
TMCC3-204ENST00000552239 SYTL4Q96C24 671 aaPredicted RBP15.15■□□□□ 0.02
TMCC3-204ENST00000552239 EYA1Q99502 592 aa15.15■□□□□ 0.02
TMCC3-204ENST00000552239 ANO8Q9HCE9 1232 aaPredicted RBP15.15■□□□□ 0.02
TMCC3-204ENST00000552239 RGPD3A6NKT7 1758 aaPredicted RBP15.15■□□□□ 0.02
TMCC3-204ENST00000552239 RGPD4Q7Z3J3 1758 aa15.15■□□□□ 0.02
TMCC3-204ENST00000552239 BTAF1O14981 1849 aa15.15■□□□□ 0.02
TMCC3-204ENST00000552239 PRIM1P49642 420 aaKnown RBP15.14■□□□□ 0.01
TMCC3-204ENST00000552239 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
TMCC3-204ENST00000552239 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
TMCC3-204ENST00000552239 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
TMCC3-204ENST00000552239 NSD2O96028 1365 aa15.12■□□□□ 0.01
TMCC3-204ENST00000552239 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
TMCC3-204ENST00000552239 CYP27B1O15528 508 aa15.11■□□□□ 0.01
TMCC3-204ENST00000552239 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
TMCC3-204ENST00000552239 PDGFDQ9GZP0 370 aaPredicted RBP15.11■□□□□ 0.01
TMCC3-204ENST00000552239 KCNQ4P56696 695 aa15.1■□□□□ 0.01
TMCC3-204ENST00000552239 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
TMCC3-204ENST00000552239 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
TMCC3-204ENST00000552239 LRP5O75197 1615 aa15.09■□□□□ 0.01
TMCC3-204ENST00000552239 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
TMCC3-204ENST00000552239 PCDH11XQ9BZA7 1347 aa15.08■□□□□ 0
TMCC3-204ENST00000552239 PCDH11YQ9BZA8 1340 aa15.08■□□□□ 0
TMCC3-204ENST00000552239 SLC15A2Q16348 729 aa15.07■□□□□ 0
TMCC3-204ENST00000552239 STK32BQ9NY57 414 aa15.07■□□□□ 0
TMCC3-204ENST00000552239 PKD1L3Q7Z443 1732 aa15.06■□□□□ 0
TMCC3-204ENST00000552239 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
TMCC3-204ENST00000552239 SPG7Q9UQ90 795 aa15.06■□□□□ 0
TMCC3-204ENST00000552239 MTHFSP49914 203 aa15.05■□□□□ -0
TMCC3-204ENST00000552239 AEBP1Q8IUX7 1158 aa15.05■□□□□ -0
TMCC3-204ENST00000552239 IGSF1Q8N6C5 1336 aa15.05■□□□□ -0
TMCC3-204ENST00000552239 TOGARAM1Q9Y4F4 1720 aa15.05■□□□□ -0
TMCC3-204ENST00000552239 ZBTB7AO95365 584 aa15.04■□□□□ -0
TMCC3-204ENST00000552239 ZNF827Q17R98 1081 aa15.04■□□□□ -0
TMCC3-204ENST00000552239 CASZ1Q86V15 1759 aa15.03■□□□□ -0
TMCC3-204ENST00000552239 ITGB4P16144 1822 aa15.03■□□□□ -0
TMCC3-204ENST00000552239 PAPPAQ13219 1627 aa15.03■□□□□ -0
TMCC3-204ENST00000552239 PHKG2P15735 406 aa15.02■□□□□ -0
TMCC3-204ENST00000552239 IL13P35225 146 aa15.02■□□□□ -0
TMCC3-204ENST00000552239 NKX1-1Q15270 411 aaPredicted RBP15.02■□□□□ -0
TMCC3-204ENST00000552239 SULT6B1Q6IMI4 303 aa15.02■□□□□ -0
TMCC3-204ENST00000552239 SPON1Q9HCB6 807 aa15.02■□□□□ -0
TMCC3-204ENST00000552239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.02■□□□□ -0
TMCC3-204ENST00000552239 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
TMCC3-204ENST00000552239 LY75O60449 1722 aa15.02□□□□□ -0.01
TMCC3-204ENST00000552239 SLC27A3Q5K4L6 730 aa15.01□□□□□ -0.01
TMCC3-204ENST00000552239 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
TMCC3-204ENST00000552239 PIGBQ92521 554 aa15.01□□□□□ -0.01
TMCC3-204ENST00000552239 CCNL1Q9UK58 526 aaPredicted RBP15.01□□□□□ -0.01
TMCC3-204ENST00000552239 AKT1S1Q96B36 256 aa15□□□□□ -0.01
TMCC3-204ENST00000552239 PLEKHO1Q53GL0 409 aaPredicted RBP14.99□□□□□ -0.01
TMCC3-204ENST00000552239 HMOX1P09601 288 aa14.98□□□□□ -0.01
TMCC3-204ENST00000552239 ZNF530Q6P9A1 599 aaPredicted RBP14.98□□□□□ -0.01
TMCC3-204ENST00000552239 PPP1R1BQ9UD71 204 aaPredicted RBP14.98□□□□□ -0.01
TMCC3-204ENST00000552239 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
TMCC3-204ENST00000552239 TMOD3Q9NYL9 352 aa14.97□□□□□ -0.01
TMCC3-204ENST00000552239 NPC1L1Q9UHC9 1359 aa14.97□□□□□ -0.01
TMCC3-204ENST00000552239 TUBGCP6Q96RT7 1819 aa14.96□□□□□ -0.01
TMCC3-204ENST00000552239 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
TMCC3-204ENST00000552239 PTGER2P43116 358 aa14.96□□□□□ -0.01
TMCC3-204ENST00000552239 TFCP2L1Q9NZI6 479 aa14.96□□□□□ -0.01
TMCC3-204ENST00000552239 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
TMCC3-204ENST00000552239 PNPLA7Q6ZV29 1317 aa14.95□□□□□ -0.02
TMCC3-204ENST00000552239 AMOTQ4VCS5 1084 aa14.95□□□□□ -0.02
TMCC3-204ENST00000552239 KDRP35968 1356 aa14.95□□□□□ -0.02
TMCC3-204ENST00000552239 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
TMCC3-204ENST00000552239 MTFR1LQ9H019 292 aa14.94□□□□□ -0.02
TMCC3-204ENST00000552239 C5P01031 1676 aa14.93□□□□□ -0.02
TMCC3-204ENST00000552239 KDM6AO15550 1401 aaPredicted RBP14.93□□□□□ -0.02
TMCC3-204ENST00000552239 SMIM5Q71RC9 77 aa14.93□□□□□ -0.02
TMCC3-204ENST00000552239 DCAF5Q96JK2 942 aa14.93□□□□□ -0.02
TMCC3-204ENST00000552239 ATG3Q9NT62 314 aa14.93□□□□□ -0.02
TMCC3-204ENST00000552239 TAF1LQ8IZX4 1826 aa14.93□□□□□ -0.02
TMCC3-204ENST00000552239 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
TMCC3-204ENST00000552239 MSH5O43196 834 aa14.92□□□□□ -0.02
TMCC3-204ENST00000552239 HSP90AB1P08238 724 aaKnown RBP14.92□□□□□ -0.02
TMCC3-204ENST00000552239 C1orf141Q5JVX7 400 aa14.92□□□□□ -0.02
TMCC3-204ENST00000552239 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
TMCC3-204ENST00000552239 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
TMCC3-204ENST00000552239 PLEKHG2Q9H7P9 1386 aa14.91□□□□□ -0.02
TMCC3-204ENST00000552239 LOC102724428A0A0B4J2F2 783 aa14.91□□□□□ -0.02
TMCC3-204ENST00000552239 ERVV-2B6SEH9 535 aa14.91□□□□□ -0.02
TMCC3-204ENST00000552239 SIK1P57059 783 aa14.91□□□□□ -0.02
TMCC3-204ENST00000552239 CABP4P57796 275 aa14.91□□□□□ -0.02
TMCC3-204ENST00000552239 COL23A1Q86Y22 540 aaPredicted RBP14.91□□□□□ -0.02
TMCC3-204ENST00000552239 SGIP1Q9BQI5 828 aa14.91□□□□□ -0.02
TMCC3-204ENST00000552239 PPP2R1AP30153 589 aa14.9□□□□□ -0.02
TMCC3-204ENST00000552239 ATP6V1AP38606 617 aa14.9□□□□□ -0.02
TMCC3-204ENST00000552239 ITPK1Q13572 414 aa14.9□□□□□ -0.02
TMCC3-204ENST00000552239 AMIGO3Q86WK7 504 aa14.9□□□□□ -0.02
TMCC3-204ENST00000552239 NFATC2IPQ8NCF5 419 aa14.9□□□□□ -0.02
TMCC3-204ENST00000552239 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
TMCC3-204ENST00000552239 MTHFSDQ2M296 383 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms