RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 RAPGEF4Q8WZA2 1011 aa23.95■■□□□ 1.43
CNOT2-236ENST00000552231 SLC15A2Q16348 729 aa23.94■■□□□ 1.42
CNOT2-236ENST00000552231 USHBP1Q8N6Y0 703 aa23.94■■□□□ 1.42
CNOT2-236ENST00000552231 STK32BQ9NY57 414 aa23.94■■□□□ 1.42
CNOT2-236ENST00000552231 TATP17735 454 aaPredicted RBP23.93■■□□□ 1.42
CNOT2-236ENST00000552231 WASHC2AQ641Q2 1341 aa23.93■■□□□ 1.42
CNOT2-236ENST00000552231 PANK3Q9H999 370 aa23.91■■□□□ 1.42
CNOT2-236ENST00000552231 PRIM1P49642 420 aaKnown RBP23.9■■□□□ 1.42
CNOT2-236ENST00000552231 POLKQ9UBT6 870 aa23.9■■□□□ 1.42
CNOT2-236ENST00000552231 RGPD2P0DJD1 1756 aa23.9■■□□□ 1.42
CNOT2-236ENST00000552231 PPM1GO15355 546 aaPredicted RBP23.89■■□□□ 1.41
CNOT2-236ENST00000552231 SLC27A3Q5K4L6 730 aa23.89■■□□□ 1.41
CNOT2-236ENST00000552231 BTAF1O14981 1849 aa23.88■■□□□ 1.41
CNOT2-236ENST00000552231 SYTL4Q96C24 671 aaPredicted RBP23.88■■□□□ 1.41
CNOT2-236ENST00000552231 PDGFDQ9GZP0 370 aaPredicted RBP23.88■■□□□ 1.41
CNOT2-236ENST00000552231 LRRC4BQ9NT99 713 aa23.88■■□□□ 1.41
CNOT2-236ENST00000552231 NCAPD2Q15021 1401 aa23.87■■□□□ 1.41
CNOT2-236ENST00000552231 MIER1Q8N108 512 aa23.87■■□□□ 1.41
CNOT2-236ENST00000552231 NSD2O96028 1365 aa23.86■■□□□ 1.41
CNOT2-236ENST00000552231 PCDH11XQ9BZA7 1347 aa23.86■■□□□ 1.41
CNOT2-236ENST00000552231 PCDH11YQ9BZA8 1340 aa23.86■■□□□ 1.41
CNOT2-236ENST00000552231 PPP1R1BQ9UD71 204 aaPredicted RBP23.85■■□□□ 1.41
CNOT2-236ENST00000552231 CASZ1Q86V15 1759 aa23.85■■□□□ 1.41
CNOT2-236ENST00000552231 SHANK3Q9BYB0 1731 aa23.85■■□□□ 1.41
CNOT2-236ENST00000552231 ANKRD26Q9UPS8 1709 aa23.83■■□□□ 1.41
CNOT2-236ENST00000552231 ZBTB7AO95365 584 aa23.83■■□□□ 1.41
CNOT2-236ENST00000552231 EYA1Q99502 592 aa23.83■■□□□ 1.41
CNOT2-236ENST00000552231 PAPPAQ13219 1627 aa23.83■■□□□ 1.4
CNOT2-236ENST00000552231 KAT6BQ8WYB5 2073 aa23.81■■□□□ 1.4
CNOT2-236ENST00000552231 CYP27B1O15528 508 aa23.81■■□□□ 1.4
CNOT2-236ENST00000552231 TNNT2P45379 298 aaPredicted RBP23.81■■□□□ 1.4
CNOT2-236ENST00000552231 AKT1S1Q96B36 256 aa23.81■■□□□ 1.4
CNOT2-236ENST00000552231 PTGER2P43116 358 aa23.8■■□□□ 1.4
CNOT2-236ENST00000552231 ZNF827Q17R98 1081 aa23.8■■□□□ 1.4
CNOT2-236ENST00000552231 MTFR1LQ9H019 292 aa23.8■■□□□ 1.4
CNOT2-236ENST00000552231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.8■■□□□ 1.41e-6■■□□□ 14.2
CNOT2-236ENST00000552231 EIF4A2Q14240 407 aaKnown RBP23.79■■□□□ 1.4
CNOT2-236ENST00000552231 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
CNOT2-236ENST00000552231 ATF5Q9Y2D1 282 aaPredicted RBP23.79■■□□□ 1.4
CNOT2-236ENST00000552231 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
CNOT2-236ENST00000552231 KNSTRNQ9Y448 316 aa23.78■■□□□ 1.4
CNOT2-236ENST00000552231 MAP2P11137 1827 aaKnown RBP23.77■■□□□ 1.4
CNOT2-236ENST00000552231 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
CNOT2-236ENST00000552231 MORC1Q86VD1 984 aa23.76■■□□□ 1.39
CNOT2-236ENST00000552231 KIF7Q2M1P5 1343 aa23.76■■□□□ 1.39
CNOT2-236ENST00000552231 PLEKHG2Q9H7P9 1386 aa23.75■■□□□ 1.39
CNOT2-236ENST00000552231 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
CNOT2-236ENST00000552231 CCNL1Q9UK58 526 aaPredicted RBP23.74■■□□□ 1.39
CNOT2-236ENST00000552231 CENPBP07199 599 aaPredicted RBP23.74■■□□□ 1.39
CNOT2-236ENST00000552231 HMGB2P26583 209 aaKnown RBP23.74■■□□□ 1.39
CNOT2-236ENST00000552231 KCNQ4P56696 695 aa23.74■■□□□ 1.39
CNOT2-236ENST00000552231 SLC16A10Q8TF71 515 aa23.74■■□□□ 1.39
CNOT2-236ENST00000552231 MPRIPQ6WCQ1 1025 aa23.73■■□□□ 1.39
CNOT2-236ENST00000552231 IGSF1Q8N6C5 1336 aa23.73■■□□□ 1.39
CNOT2-236ENST00000552231 PKD1L3Q7Z443 1732 aa23.72■■□□□ 1.39
CNOT2-236ENST00000552231 AMER1Q5JTC6 1135 aaPredicted RBP23.72■■□□□ 1.39
CNOT2-236ENST00000552231 TFCP2L1Q9NZI6 479 aa23.72■■□□□ 1.39
CNOT2-236ENST00000552231 LY75O60449 1722 aa23.71■■□□□ 1.39
CNOT2-236ENST00000552231 PNPLA7Q6ZV29 1317 aa23.71■■□□□ 1.39
CNOT2-236ENST00000552231 IFNL2Q8IZJ0 200 aa23.7■■□□□ 1.38
CNOT2-236ENST00000552231 SMARCC1Q92922 1105 aaPredicted RBP23.69■■□□□ 1.38
CNOT2-236ENST00000552231 PHKG2P15735 406 aa23.69■■□□□ 1.38
CNOT2-236ENST00000552231 PIGBQ92521 554 aa23.69■■□□□ 1.38
CNOT2-236ENST00000552231 PALLDQ8WX93 1383 aa23.68■■□□□ 1.38
CNOT2-236ENST00000552231 DCAF8L1A6NGE4 600 aa23.67■■□□□ 1.38
CNOT2-236ENST00000552231 PER1O15534 1290 aaPredicted RBP23.67■■□□□ 1.38
CNOT2-236ENST00000552231 ARXQ96QS3 562 aa23.66■■□□□ 1.38
CNOT2-236ENST00000552231 SYT17Q9BSW7 474 aa23.65■■□□□ 1.38
CNOT2-236ENST00000552231 FHDC1Q9C0D6 1143 aaPredicted RBP23.65■■□□□ 1.38
CNOT2-236ENST00000552231 QSER1Q2KHR3 1735 aa23.65■■□□□ 1.38
CNOT2-236ENST00000552231 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.37
CNOT2-236ENST00000552231 TMOD3Q9NYL9 352 aa23.64■■□□□ 1.37
CNOT2-236ENST00000552231 DDX10Q13206 875 aaKnown RBP23.63■■□□□ 1.37
CNOT2-236ENST00000552231 AMOTQ4VCS5 1084 aa23.63■■□□□ 1.37
CNOT2-236ENST00000552231 PLEKHO1Q53GL0 409 aaPredicted RBP23.63■■□□□ 1.37
CNOT2-236ENST00000552231 MAP3K5Q99683 1374 aa23.61■■□□□ 1.37
CNOT2-236ENST00000552231 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
CNOT2-236ENST00000552231 POLD1P28340 1107 aa23.61■■□□□ 1.37
CNOT2-236ENST00000552231 IL13P35225 146 aa23.61■■□□□ 1.37
CNOT2-236ENST00000552231 COL23A1Q86Y22 540 aaPredicted RBP23.6■■□□□ 1.37
CNOT2-236ENST00000552231 FLAD1Q8NFF5 587 aa23.6■■□□□ 1.37
CNOT2-236ENST00000552231 ERVV-2B6SEH9 535 aa23.59■■□□□ 1.37
CNOT2-236ENST00000552231 DCAF5Q96JK2 942 aa23.59■■□□□ 1.37
CNOT2-236ENST00000552231 AEBP1Q8IUX7 1158 aa23.59■■□□□ 1.37
CNOT2-236ENST00000552231 KDRP35968 1356 aa23.58■■□□□ 1.37
CNOT2-236ENST00000552231 ITGB4P16144 1822 aa23.58■■□□□ 1.37
CNOT2-236ENST00000552231 UTRNP46939 3433 aa23.58■■□□□ 1.37
CNOT2-236ENST00000552231 LOC102724428A0A0B4J2F2 783 aa23.58■■□□□ 1.36
CNOT2-236ENST00000552231 MTHFSP49914 203 aa23.58■■□□□ 1.36
CNOT2-236ENST00000552231 SIK1P57059 783 aa23.58■■□□□ 1.36
CNOT2-236ENST00000552231 SULT6B1Q6IMI4 303 aa23.58■■□□□ 1.36
CNOT2-236ENST00000552231 ASAP1Q9ULH1 1129 aa23.58■■□□□ 1.36
CNOT2-236ENST00000552231 NPC1L1Q9UHC9 1359 aa23.57■■□□□ 1.36
CNOT2-236ENST00000552231 ZNF530Q6P9A1 599 aaPredicted RBP23.56■■□□□ 1.36
CNOT2-236ENST00000552231 ATG3Q9NT62 314 aa23.56■■□□□ 1.36
CNOT2-236ENST00000552231 TUBGCP6Q96RT7 1819 aa23.56■■□□□ 1.36
CNOT2-236ENST00000552231 MSH5O43196 834 aa23.55■■□□□ 1.36
CNOT2-236ENST00000552231 C5P01031 1676 aa23.55■■□□□ 1.36
CNOT2-236ENST00000552231 COL24A1Q17RW2 1714 aa23.54■■□□□ 1.36
CNOT2-236ENST00000552231 CC2D1BQ5T0F9 858 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms