RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 CARD14Q9BXL6 1004 aa8.94□□□□□ -0.98
PPFIA2-226ENST00000552020 CXXC1Q9P0U4 656 aaPredicted RBP8.94□□□□□ -0.98
PPFIA2-226ENST00000552020 KIAA1024Q9UPX6 916 aa8.94□□□□□ -0.98
PPFIA2-226ENST00000552020 SFI1A8K8P3 1242 aa8.93□□□□□ -0.98
PPFIA2-226ENST00000552020 LGR5O75473 907 aa8.93□□□□□ -0.98
PPFIA2-226ENST00000552020 TPCN2Q8NHX9 752 aa8.93□□□□□ -0.98
PPFIA2-226ENST00000552020 THAP11Q96EK4 314 aa8.93□□□□□ -0.98
PPFIA2-226ENST00000552020 IRX2Q9BZI1 471 aaPredicted RBP8.93□□□□□ -0.98
PPFIA2-226ENST00000552020 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
PPFIA2-226ENST00000552020 EGFL7Q9UHF1 273 aa8.93□□□□□ -0.98
PPFIA2-226ENST00000552020 APLP1P51693 650 aa8.92□□□□□ -0.98
PPFIA2-226ENST00000552020 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
PPFIA2-226ENST00000552020 SIX5Q8N196 739 aa8.92□□□□□ -0.98
PPFIA2-226ENST00000552020 CCDC85AQ96PX6 553 aaPredicted RBP8.92□□□□□ -0.98
PPFIA2-226ENST00000552020 HINFPQ9BQA5 517 aa8.92□□□□□ -0.98
PPFIA2-226ENST00000552020 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
PPFIA2-226ENST00000552020 HPS5Q9UPZ3 1129 aa8.92□□□□□ -0.98
PPFIA2-226ENST00000552020 MAGEB6P1A0A0J9YX57 407 aa8.91□□□□□ -0.98
PPFIA2-226ENST00000552020 BCAMP50895 628 aa8.91□□□□□ -0.98
PPFIA2-226ENST00000552020 CHIC2Q9UKJ5 165 aa8.91□□□□□ -0.98
PPFIA2-226ENST00000552020 ICMTO60725 284 aa8.9□□□□□ -0.98
PPFIA2-226ENST00000552020 DXOO77932 396 aaKnown RBP8.9□□□□□ -0.98
PPFIA2-226ENST00000552020 BCL11AQ9H165 835 aa8.9□□□□□ -0.98
PPFIA2-226ENST00000552020 PRDM9Q9NQV7 894 aa8.9□□□□□ -0.98
PPFIA2-226ENST00000552020 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-226ENST00000552020 HMGB1P09429 215 aaKnown RBP8.89□□□□□ -0.99
PPFIA2-226ENST00000552020 OCLNQ16625 522 aa8.89□□□□□ -0.99
PPFIA2-226ENST00000552020 MSS51Q4VC12 460 aa8.89□□□□□ -0.99
PPFIA2-226ENST00000552020 TAS1R3Q7RTX0 852 aa8.89□□□□□ -0.99
PPFIA2-226ENST00000552020 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
PPFIA2-226ENST00000552020 GTF3C2Q8WUA4 911 aaPredicted RBP8.89□□□□□ -0.99
PPFIA2-226ENST00000552020 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
PPFIA2-226ENST00000552020 SPSB2Q99619 263 aa8.88□□□□□ -0.99
PPFIA2-226ENST00000552020 SEPT3Q9UH03 358 aa8.88□□□□□ -0.99
PPFIA2-226ENST00000552020 C21orf2O43822 256 aa8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 DKK1O94907 266 aa8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 TAGLNQ01995 201 aaKnown RBP8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 AGERQ15109 404 aa8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 CYB5RLQ6IPT4 315 aa8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 ZSCAN29Q8IWY8 852 aaPredicted RBP8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 UNC93B1Q9H1C4 597 aa8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 DCTN4Q9UJW0 460 aa8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 ATAD2BQ9ULI0 1458 aa8.87□□□□□ -0.99
PPFIA2-226ENST00000552020 LAMC3Q9Y6N6 1575 aa8.86□□□□□ -0.99
PPFIA2-226ENST00000552020 MTMR3Q13615 1198 aa8.86□□□□□ -0.99
PPFIA2-226ENST00000552020 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
PPFIA2-226ENST00000552020 SH3BP5LQ7L8J4 393 aa8.86□□□□□ -0.99
PPFIA2-226ENST00000552020 FAM160A2Q8N612 972 aaPredicted RBP8.86□□□□□ -0.99
PPFIA2-226ENST00000552020 ASB16Q96NS5 453 aa8.86□□□□□ -0.99
PPFIA2-226ENST00000552020 DNMT3AQ9Y6K1 912 aaPredicted RBP8.86□□□□□ -0.99
PPFIA2-226ENST00000552020 HSP90B1P14625 803 aaKnown RBP8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 RNF20Q5VTR2 975 aa8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 FBXO33Q7Z6M2 555 aa8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 SLC10A4Q96EP9 437 aa8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 PCDHB11Q9Y5F2 797 aa8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 PDS5BQ9NTI5 1447 aa8.85□□□□□ -0.99
PPFIA2-226ENST00000552020 ITGBL1O95965 494 aaPredicted RBP8.84□□□□□ -0.99
PPFIA2-226ENST00000552020 MMP16P51512 607 aa8.84□□□□□ -0.99
PPFIA2-226ENST00000552020 COPS2P61201 443 aa8.84□□□□□ -0.99
PPFIA2-226ENST00000552020 KCNC4Q03721 635 aa8.84□□□□□ -0.99
PPFIA2-226ENST00000552020 TSNAXIP1Q2TAA8 658 aa8.84□□□□□ -0.99
PPFIA2-226ENST00000552020 VAMP1P23763 118 aa8.83□□□□□ -1
PPFIA2-226ENST00000552020 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
PPFIA2-226ENST00000552020 SF3B2Q13435 895 aaKnown RBP8.83□□□□□ -1
PPFIA2-226ENST00000552020 SREK1Q8WXA9 508 aaKnown RBP8.83□□□□□ -1
PPFIA2-226ENST00000552020 ARHGEF11O15085 1522 aa8.82□□□□□ -1
PPFIA2-226ENST00000552020 HMGXB3Q12766 1538 aa8.82□□□□□ -1
PPFIA2-226ENST00000552020 USP4Q13107 963 aa8.82□□□□□ -1
PPFIA2-226ENST00000552020 LINC01559Q495D7 138 aa8.82□□□□□ -1
PPFIA2-226ENST00000552020 EAPPQ56P03 285 aaPredicted RBP8.82□□□□□ -1
PPFIA2-226ENST00000552020 TSEN2Q8NCE0 465 aaKnown RBP8.82□□□□□ -1
PPFIA2-226ENST00000552020 DRC1Q96MC2 740 aa8.82□□□□□ -1
PPFIA2-226ENST00000552020 PPP1R1BQ9UD71 204 aaPredicted RBP8.82□□□□□ -1
PPFIA2-226ENST00000552020 PCDHGA11Q9Y5H2 935 aa8.82□□□□□ -1
PPFIA2-226ENST00000552020 PTCD1O75127 700 aaKnown RBP8.81□□□□□ -1
PPFIA2-226ENST00000552020 RECKO95980 971 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 RAB15P59190 212 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 ZC3H6P61129 1189 aaKnown RBP8.81□□□□□ -1
PPFIA2-226ENST00000552020 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
PPFIA2-226ENST00000552020 NAA30Q147X3 362 aaPredicted RBP8.81□□□□□ -1
PPFIA2-226ENST00000552020 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 ERFEQ4G0M1 354 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 PTCRAQ6ISU1 281 aaPredicted RBP8.81□□□□□ -1
PPFIA2-226ENST00000552020 CAPN12Q6ZSI9 719 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 GAS2L2Q8NHY3 880 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 C8orf37Q96NL8 207 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 MRC2Q9UBG0 1479 aa8.81□□□□□ -1
PPFIA2-226ENST00000552020 TLL1O43897 1013 aa8.8□□□□□ -1
PPFIA2-226ENST00000552020 CDK11BP21127 795 aaKnown RBP8.8□□□□□ -1
PPFIA2-226ENST00000552020 ARHGAP4P98171 946 aa8.8□□□□□ -1
PPFIA2-226ENST00000552020 BPHLQ86WA6 291 aaPredicted RBP8.8□□□□□ -1
PPFIA2-226ENST00000552020 PUS7Q96PZ0 661 aaKnown RBP8.8□□□□□ -1
PPFIA2-226ENST00000552020 PURBQ96QR8 312 aaKnown RBP8.8□□□□□ -1
PPFIA2-226ENST00000552020 CDK11AQ9UQ88 783 aaPredicted RBP8.8□□□□□ -1
PPFIA2-226ENST00000552020 MYCP01106 439 aaPredicted RBP8.79□□□□□ -1
PPFIA2-226ENST00000552020 RGL4Q8IZJ4 473 aa8.79□□□□□ -1
PPFIA2-226ENST00000552020 FAM177A1Q8N128 213 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms