RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 PAPPAQ13219 1627 aa32■■■□□ 2.71
TROAP-216ENST00000551567 ZCRB1Q8TBF4 217 aaKnown RBP32■■■□□ 2.71
TROAP-216ENST00000551567 ANKRD26Q9UPS8 1709 aa32■■■□□ 2.71
TROAP-216ENST00000551567 KIF24Q5T7B8 1368 aa31.99■■■□□ 2.71
TROAP-216ENST00000551567 PPP1R1BQ9UD71 204 aaPredicted RBP31.99■■■□□ 2.71
TROAP-216ENST00000551567 EMILIN1Q9Y6C2 1016 aa31.99■■■□□ 2.71
TROAP-216ENST00000551567 HSPA5P11021 654 aaKnown RBP31.98■■■□□ 2.71
TROAP-216ENST00000551567 EIF4G2P78344 907 aaKnown RBP eCLIP31.98■■■□□ 2.71
TROAP-216ENST00000551567 SLC15A2Q16348 729 aa31.98■■■□□ 2.71
TROAP-216ENST00000551567 CGNL1Q0VF96 1302 aa31.97■■■□□ 2.71
TROAP-216ENST00000551567 MAP2P11137 1827 aaKnown RBP31.96■■■□□ 2.71
TROAP-216ENST00000551567 SYTL4Q96C24 671 aaPredicted RBP31.96■■■□□ 2.71
TROAP-216ENST00000551567 ZBTB7AO95365 584 aa31.95■■■□□ 2.71
TROAP-216ENST00000551567 RAPGEF4Q8WZA2 1011 aa31.95■■■□□ 2.71
TROAP-216ENST00000551567 PPM1GO15355 546 aaPredicted RBP31.93■■■□□ 2.7
TROAP-216ENST00000551567 PRIM1P49642 420 aaKnown RBP31.92■■■□□ 2.7
TROAP-216ENST00000551567 TATP17735 454 aaPredicted RBP31.91■■■□□ 2.7
TROAP-216ENST00000551567 LRRC4BQ9NT99 713 aa31.91■■■□□ 2.7
TROAP-216ENST00000551567 NSD2O96028 1365 aa31.9■■■□□ 2.7
TROAP-216ENST00000551567 LY75O60449 1722 aa31.89■■■□□ 2.7
TROAP-216ENST00000551567 ATF5Q9Y2D1 282 aaPredicted RBP31.88■■■□□ 2.69
TROAP-216ENST00000551567 ZNF827Q17R98 1081 aa31.87■■■□□ 2.69
TROAP-216ENST00000551567 PKD1L3Q7Z443 1732 aa31.86■■■□□ 2.69
TROAP-216ENST00000551567 PCDH11XQ9BZA7 1347 aa31.84■■■□□ 2.69
TROAP-216ENST00000551567 PCDH11YQ9BZA8 1340 aa31.84■■■□□ 2.69
TROAP-216ENST00000551567 PTGER2P43116 358 aa31.83■■■□□ 2.69
TROAP-216ENST00000551567 TNNT2P45379 298 aaPredicted RBP31.83■■■□□ 2.69
TROAP-216ENST00000551567 KCNQ4P56696 695 aa31.83■■■□□ 2.69
TROAP-216ENST00000551567 SLC27A3Q5K4L6 730 aa31.83■■■□□ 2.69
TROAP-216ENST00000551567 TUBGCP6Q96RT7 1819 aa31.82■■■□□ 2.68
TROAP-216ENST00000551567 WASHC2AQ641Q2 1341 aa31.82■■■□□ 2.68
TROAP-216ENST00000551567 QSER1Q2KHR3 1735 aa31.82■■■□□ 2.68
TROAP-216ENST00000551567 NCAPD2Q15021 1401 aa31.82■■■□□ 2.68
TROAP-216ENST00000551567 MTFR1LQ9H019 292 aa31.81■■■□□ 2.68
TROAP-216ENST00000551567 PANK3Q9H999 370 aa31.81■■■□□ 2.68
TROAP-216ENST00000551567 POLKQ9UBT6 870 aa31.81■■■□□ 2.68
TROAP-216ENST00000551567 TOGARAM1Q9Y4F4 1720 aa31.8■■■□□ 2.68
TROAP-216ENST00000551567 AKT1S1Q96B36 256 aa31.78■■■□□ 2.68
TROAP-216ENST00000551567 CYP27B1O15528 508 aa31.77■■■□□ 2.68
TROAP-216ENST00000551567 ITGB4P16144 1822 aa31.77■■■□□ 2.68
TROAP-216ENST00000551567 EYA1Q99502 592 aa31.76■■■□□ 2.67
TROAP-216ENST00000551567 CCNL1Q9UK58 526 aaPredicted RBP31.74■■■□□ 2.67
TROAP-216ENST00000551567 SGIP1Q9BQI5 828 aa31.73■■■□□ 2.67
TROAP-216ENST00000551567 C5P01031 1676 aa31.71■■■□□ 2.67
TROAP-216ENST00000551567 EIF4A2Q14240 407 aaKnown RBP31.71■■■□□ 2.67
TROAP-216ENST00000551567 TFCP2L1Q9NZI6 479 aa31.71■■■□□ 2.67
TROAP-216ENST00000551567 PNPLA7Q6ZV29 1317 aa31.71■■■□□ 2.67
TROAP-216ENST00000551567 MPRIPQ6WCQ1 1025 aa31.7■■■□□ 2.67
TROAP-216ENST00000551567 SPG7Q9UQ90 795 aa31.7■■■□□ 2.67
TROAP-216ENST00000551567 FHDC1Q9C0D6 1143 aaPredicted RBP31.69■■■□□ 2.66
TROAP-216ENST00000551567 DCAF8L1A6NGE4 600 aa31.68■■■□□ 2.66
TROAP-216ENST00000551567 TAF1LQ8IZX4 1826 aa31.67■■■□□ 2.66
TROAP-216ENST00000551567 PALLDQ8WX93 1383 aa31.67■■■□□ 2.66
TROAP-216ENST00000551567 ARXQ96QS3 562 aa31.65■■■□□ 2.66
TROAP-216ENST00000551567 COL24A1Q17RW2 1714 aa31.64■■■□□ 2.66
TROAP-216ENST00000551567 MORC1Q86VD1 984 aa31.64■■■□□ 2.66
TROAP-216ENST00000551567 SLC16A10Q8TF71 515 aa31.63■■■□□ 2.65
TROAP-216ENST00000551567 SYT17Q9BSW7 474 aa31.63■■■□□ 2.65
TROAP-216ENST00000551567 KNSTRNQ9Y448 316 aa31.63■■■□□ 2.65
TROAP-216ENST00000551567 NKX1-1Q15270 411 aaPredicted RBP31.62■■■□□ 2.65
TROAP-216ENST00000551567 KIF7Q2M1P5 1343 aa31.62■■■□□ 2.65
TROAP-216ENST00000551567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.62■■■□□ 2.65
TROAP-216ENST00000551567 IGSF1Q8N6C5 1336 aa31.61■■■□□ 2.65
TROAP-216ENST00000551567 PIGBQ92521 554 aa31.59■■■□□ 2.65
TROAP-216ENST00000551567 MSH5O43196 834 aa31.58■■■□□ 2.65
TROAP-216ENST00000551567 PHKG2P15735 406 aa31.58■■■□□ 2.65
TROAP-216ENST00000551567 YY1P25490 414 aa31.58■■■□□ 2.65
TROAP-216ENST00000551567 IFNL2Q8IZJ0 200 aa31.58■■■□□ 2.65
TROAP-216ENST00000551567 SMARCC1Q92922 1105 aaPredicted RBP31.57■■■□□ 2.64
TROAP-216ENST00000551567 C4BP0C0L5 1744 aa31.57■■■□□ 2.64
TROAP-216ENST00000551567 POLD1P28340 1107 aa31.56■■■□□ 2.64
TROAP-216ENST00000551567 COL23A1Q86Y22 540 aaPredicted RBP31.55■■■□□ 2.64
TROAP-216ENST00000551567 TMOD3Q9NYL9 352 aa31.55■■■□□ 2.64
TROAP-216ENST00000551567 KLHL34Q8N239 644 aa31.54■■■□□ 2.64
TROAP-216ENST00000551567 MAP3K5Q99683 1374 aa31.54■■■□□ 2.64
TROAP-216ENST00000551567 PLEKHG2Q9H7P9 1386 aa31.54■■■□□ 2.64
TROAP-216ENST00000551567 AMER1Q5JTC6 1135 aaPredicted RBP31.52■■■□□ 2.64
TROAP-216ENST00000551567 AEBP1Q8IUX7 1158 aa31.5■■■□□ 2.63
TROAP-216ENST00000551567 UBR3Q6ZT12 1888 aa31.5■■■□□ 2.63
TROAP-216ENST00000551567 HMGB2P26583 209 aaKnown RBP31.48■■■□□ 2.63
TROAP-216ENST00000551567 MSL1Q68DK7 614 aa31.48■■■□□ 2.63
TROAP-216ENST00000551567 ASAP1Q9ULH1 1129 aa31.48■■■□□ 2.63
TROAP-216ENST00000551567 PLEKHO1Q53GL0 409 aaPredicted RBP31.47■■■□□ 2.63
TROAP-216ENST00000551567 AK7Q96M32 723 aa31.47■■■□□ 2.63
TROAP-216ENST00000551567 LOC102724428A0A0B4J2F2 783 aa31.46■■■□□ 2.63
TROAP-216ENST00000551567 SIK1P57059 783 aa31.46■■■□□ 2.63
TROAP-216ENST00000551567 ZNF530Q6P9A1 599 aaPredicted RBP31.46■■■□□ 2.63
TROAP-216ENST00000551567 SULT6B1Q6IMI4 303 aa31.43■■■□□ 2.62
TROAP-216ENST00000551567 AMIGO3Q86WK7 504 aa31.43■■■□□ 2.62
TROAP-216ENST00000551567 LINC00116Q8NCU8 138 aa31.43■■■□□ 2.62
TROAP-216ENST00000551567 FLAD1Q8NFF5 587 aa31.43■■■□□ 2.62
TROAP-216ENST00000551567 KDM6AO15550 1401 aaPredicted RBP31.42■■■□□ 2.62
TROAP-216ENST00000551567 UTRNP46939 3433 aa31.42■■■□□ 2.62
TROAP-216ENST00000551567 PHF14O94880 888 aa31.42■■■□□ 2.62
TROAP-216ENST00000551567 AMOTQ4VCS5 1084 aa31.42■■■□□ 2.62
TROAP-216ENST00000551567 ATG3Q9NT62 314 aa31.42■■■□□ 2.62
TROAP-216ENST00000551567 HSP90AB1P08238 724 aaKnown RBP31.41■■■□□ 2.62
TROAP-216ENST00000551567 IL13P35225 146 aa31.41■■■□□ 2.62
TROAP-216ENST00000551567 CC2D1BQ5T0F9 858 aaKnown RBP31.41■■■□□ 2.62
TROAP-216ENST00000551567 SMIM5Q71RC9 77 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms