RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 FNBP4Q8N3X1 1017 aaPredicted RBP7.08□□□□□ -1.28
SCAF11-215ENST00000551391 ADAM32Q8TC27 787 aa7.08□□□□□ -1.28
SCAF11-215ENST00000551391 GDPD2Q9HCC8 539 aa7.08□□□□□ -1.28
SCAF11-215ENST00000551391 TBC1D2BQ9UPU7 963 aa7.08□□□□□ -1.28
SCAF11-215ENST00000551391 MARSP56192 900 aaKnown RBP7.07□□□□□ -1.28
SCAF11-215ENST00000551391 TMPRSS4Q9NRS4 437 aa7.07□□□□□ -1.28
SCAF11-215ENST00000551391 SUZ12Q15022 739 aaKnown RBP7.06□□□□□ -1.28
SCAF11-215ENST00000551391 RNFT1Q5M7Z0 435 aa7.06□□□□□ -1.28
SCAF11-215ENST00000551391 ZNF385CQ66K41 422 aaPredicted RBP7.06□□□□□ -1.28
SCAF11-215ENST00000551391 PROSER2Q86WR7 435 aaPredicted RBP7.06□□□□□ -1.28
SCAF11-215ENST00000551391 RNF217Q8TC41 542 aa7.06□□□□□ -1.28
SCAF11-215ENST00000551391 TRAK2O60296 914 aa7.05□□□□□ -1.28
SCAF11-215ENST00000551391 GSK3AP49840 483 aa7.05□□□□□ -1.28
SCAF11-215ENST00000551391 IRF5Q13568 498 aa7.05□□□□□ -1.28
SCAF11-215ENST00000551391 WWC1Q8IX03 1113 aa7.05□□□□□ -1.28
SCAF11-215ENST00000551391 ZNF784Q8NCA9 323 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-215ENST00000551391 ADH1AP07327 375 aa7.04□□□□□ -1.28
SCAF11-215ENST00000551391 SLURP2P0DP57 97 aa7.04□□□□□ -1.28
SCAF11-215ENST00000551391 ABL2P42684 1182 aa7.04□□□□□ -1.28
SCAF11-215ENST00000551391 PTGIRP43119 386 aa7.04□□□□□ -1.28
SCAF11-215ENST00000551391 WASHC4Q2M389 1173 aa7.04□□□□□ -1.28
SCAF11-215ENST00000551391 ERVH48-1M5A8F1 160 aa7.03□□□□□ -1.28
SCAF11-215ENST00000551391 IRS1P35568 1242 aa7.03□□□□□ -1.28
SCAF11-215ENST00000551391 MAP3K10Q02779 954 aa7.03□□□□□ -1.28
SCAF11-215ENST00000551391 LYSMD3Q7Z3D4 306 aa7.03□□□□□ -1.28
SCAF11-215ENST00000551391 WHAMMQ8TF30 809 aa7.03□□□□□ -1.28
SCAF11-215ENST00000551391 OCSTAMPQ9BR26 566 aa7.03□□□□□ -1.28
SCAF11-215ENST00000551391 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
SCAF11-215ENST00000551391 SCARF2Q96GP6 870 aaPredicted RBP7.02□□□□□ -1.29
SCAF11-215ENST00000551391 KRTAP4-6Q9BYQ5 205 aa7.02□□□□□ -1.29
SCAF11-215ENST00000551391 ADAMTS2O95450 1211 aa7.01□□□□□ -1.29
SCAF11-215ENST00000551391 KANK3Q6NY19 840 aa7.01□□□□□ -1.29
SCAF11-215ENST00000551391 SEPT12Q8IYM1 358 aa7.01□□□□□ -1.29
SCAF11-215ENST00000551391 ENAMQ9NRM1 1142 aa7.01□□□□□ -1.29
SCAF11-215ENST00000551391 ZNF330Q9Y3S2 320 aaPredicted RBP7.01□□□□□ -1.29
SCAF11-215ENST00000551391 SENP3-EIF4A1A0A087X0R7 540 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 ZBBXA8MT70 800 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 LILRA1O75019 489 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 ARHGEF15O94989 841 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 ADD1P35611 737 aaKnown RBP7□□□□□ -1.29
SCAF11-215ENST00000551391 SRSF11Q05519 484 aaKnown RBP7□□□□□ -1.29
SCAF11-215ENST00000551391 NR1H3Q13133 447 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 FOXD4L5Q5VV16 416 aaPredicted RBP7□□□□□ -1.29
SCAF11-215ENST00000551391 FOXR1Q6PIV2 292 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 PRICKLE2Q7Z3G6 844 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 CYLDQ9NQC7 956 aa7□□□□□ -1.29
SCAF11-215ENST00000551391 DNMT3AQ9Y6K1 912 aaPredicted RBP7□□□□□ -1.29
SCAF11-215ENST00000551391 GPAT2Q6NUI2 795 aa6.99□□□□□ -1.29
SCAF11-215ENST00000551391 ESPNB1AK53 854 aa6.98□□□□□ -1.29
SCAF11-215ENST00000551391 IGHA1P01876 353 aa6.98□□□□□ -1.29
SCAF11-215ENST00000551391 FBXO45P0C2W1 286 aa6.98□□□□□ -1.29
SCAF11-215ENST00000551391 SOX11P35716 441 aa6.98□□□□□ -1.29
SCAF11-215ENST00000551391 GMCL1Q96IK5 515 aa6.98□□□□□ -1.29
SCAF11-215ENST00000551391 ATP5J2-PTCD1G3V325 749 aa6.97□□□□□ -1.29
SCAF11-215ENST00000551391 MEN1O00255 615 aa6.97□□□□□ -1.29
SCAF11-215ENST00000551391 RHOQP17081 205 aa6.97□□□□□ -1.29
SCAF11-215ENST00000551391 RNF144AP50876 292 aaPredicted RBP6.97□□□□□ -1.29
SCAF11-215ENST00000551391 FOXK2Q01167 660 aa6.97□□□□□ -1.29
SCAF11-215ENST00000551391 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
SCAF11-215ENST00000551391 RIPOR1Q6ZS17 1223 aa6.97□□□□□ -1.29
SCAF11-215ENST00000551391 KDF1Q8NAX2 398 aaPredicted RBP6.97□□□□□ -1.29
SCAF11-215ENST00000551391 PCDHB9Q9Y5E1 797 aa6.97□□□□□ -1.29
SCAF11-215ENST00000551391 MCCD1P59942 119 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-215ENST00000551391 EIF4G2P78344 907 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCAF11-215ENST00000551391 VAC14Q08AM6 782 aa6.96□□□□□ -1.3
SCAF11-215ENST00000551391 CCDC125Q86Z20 511 aa6.96□□□□□ -1.3
SCAF11-215ENST00000551391 ZNF592Q92610 1267 aa6.96□□□□□ -1.3
SCAF11-215ENST00000551391 H7C1W4 665 aa6.95□□□□□ -1.3
SCAF11-215ENST00000551391 CELA2BP08218 269 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-215ENST00000551391 TRIM22Q8IYM9 498 aa6.95□□□□□ -1.3
SCAF11-215ENST00000551391 NLRP3Q96P20 1036 aa6.95□□□□□ -1.3
SCAF11-215ENST00000551391 ESF1Q9H501 851 aaKnown RBP6.95□□□□□ -1.3
SCAF11-215ENST00000551391 ALG2Q9H553 416 aa6.95□□□□□ -1.3
SCAF11-215ENST00000551391 MBIPQ9NS73 344 aa6.95□□□□□ -1.3
SCAF11-215ENST00000551391 CUEDC1Q9NWM3 386 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-215ENST00000551391 ZNF777Q9ULD5 760 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-215ENST00000551391 POM121CA8CG34 1229 aa6.94□□□□□ -1.3
SCAF11-215ENST00000551391 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
SCAF11-215ENST00000551391 SUPT5HO00267 1087 aaKnown RBP6.94□□□□□ -1.3
SCAF11-215ENST00000551391 GIGYF1O75420 1035 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-215ENST00000551391 GPC1P35052 558 aa6.94□□□□□ -1.3
SCAF11-215ENST00000551391 SLC27A3Q5K4L6 730 aa6.94□□□□□ -1.3
SCAF11-215ENST00000551391 RNF20Q5VTR2 975 aa6.94□□□□□ -1.3
SCAF11-215ENST00000551391 TRERF1Q96PN7 1200 aa6.94□□□□□ -1.3
SCAF11-215ENST00000551391 GAS2L1Q99501 681 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-215ENST00000551391 GAS6Q14393 721 aa6.93□□□□□ -1.3
SCAF11-215ENST00000551391 PODNQ7Z5L7 613 aa6.93□□□□□ -1.3
SCAF11-215ENST00000551391 NEDD1Q8NHV4 660 aa6.93□□□□□ -1.3
SCAF11-215ENST00000551391 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-215ENST00000551391 NSFL1CQ9UNZ2 370 aaKnown RBP6.93□□□□□ -1.3
SCAF11-215ENST00000551391 DYRK1BQ9Y463 629 aa6.93□□□□□ -1.3
SCAF11-215ENST00000551391 A0A1W2PRU2 124 aa6.92□□□□□ -1.3
SCAF11-215ENST00000551391 GPR25O00155 361 aa6.92□□□□□ -1.3
SCAF11-215ENST00000551391 SEMA3FQ13275 785 aa6.92□□□□□ -1.3
SCAF11-215ENST00000551391 HDGFL1Q5TGJ6 251 aa6.92□□□□□ -1.3
SCAF11-215ENST00000551391 CC2D2BQ6DHV5 1058 aa6.92□□□□□ -1.3
SCAF11-215ENST00000551391 BEND7Q8N7W2 519 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-215ENST00000551391 GLMNQ92990 594 aa6.92□□□□□ -1.3
SCAF11-215ENST00000551391 C1orf115Q9H7X2 142 aa6.92□□□□□ -1.3
SCAF11-215ENST00000551391 IGF1RP08069 1367 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms