RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 SALL2Q9Y467 1007 aaPredicted RBP13.62□□□□□ -0.23
NEK3-203ENST00000551355 SLIT2O94813 1529 aa13.62□□□□□ -0.23
NEK3-203ENST00000551355 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
NEK3-203ENST00000551355 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
NEK3-203ENST00000551355 RTF1Q92541 710 aaKnown RBP13.61□□□□□ -0.23
NEK3-203ENST00000551355 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
NEK3-203ENST00000551355 IL16Q14005 1332 aa13.61□□□□□ -0.23
NEK3-203ENST00000551355 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
NEK3-203ENST00000551355 E9PSI1 815 aa13.6□□□□□ -0.23
NEK3-203ENST00000551355 IL2RBP14784 551 aa13.6□□□□□ -0.23
NEK3-203ENST00000551355 KCNA4P22459 653 aa13.6□□□□□ -0.23
NEK3-203ENST00000551355 C8orf37Q96NL8 207 aa13.6□□□□□ -0.23
NEK3-203ENST00000551355 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
NEK3-203ENST00000551355 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
NEK3-203ENST00000551355 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
NEK3-203ENST00000551355 VPS72Q15906 364 aa13.58□□□□□ -0.24
NEK3-203ENST00000551355 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
NEK3-203ENST00000551355 NWD2Q9ULI1 1742 aa13.58□□□□□ -0.24
NEK3-203ENST00000551355 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
NEK3-203ENST00000551355 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
NEK3-203ENST00000551355 ZNF530Q6P9A1 599 aaPredicted RBP13.57□□□□□ -0.24
NEK3-203ENST00000551355 USP21Q9UK80 565 aa13.57□□□□□ -0.24
NEK3-203ENST00000551355 SPATA31A1Q5TZJ5 1347 aa13.57□□□□□ -0.24
NEK3-203ENST00000551355 SPATA31A5Q5VU36 1347 aa13.57□□□□□ -0.24
NEK3-203ENST00000551355 SPATA31A7Q8IWB4 1347 aa13.57□□□□□ -0.24
NEK3-203ENST00000551355 LRP6O75581 1613 aa13.57□□□□□ -0.24
NEK3-203ENST00000551355 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
NEK3-203ENST00000551355 RGPD5Q99666 1765 aa13.56□□□□□ -0.24
NEK3-203ENST00000551355 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
NEK3-203ENST00000551355 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
NEK3-203ENST00000551355 IFNL2Q8IZJ0 200 aa13.56□□□□□ -0.24
NEK3-203ENST00000551355 ZCRB1Q8TBF4 217 aaKnown RBP13.56□□□□□ -0.24
NEK3-203ENST00000551355 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 GNAI1P63096 354 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
NEK3-203ENST00000551355 IFT57Q9NWB7 429 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 BABAM1Q9NWV8 329 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 PLCH1Q4KWH8 1693 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
NEK3-203ENST00000551355 MEGF6O75095 1541 aa13.54□□□□□ -0.24
NEK3-203ENST00000551355 USP35Q9P2H5 1018 aa13.54□□□□□ -0.24
NEK3-203ENST00000551355 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
NEK3-203ENST00000551355 CFAP44Q96MT7 982 aa13.53□□□□□ -0.24
NEK3-203ENST00000551355 TRPC5Q9UL62 973 aaPredicted RBP13.53□□□□□ -0.24
NEK3-203ENST00000551355 AFF2P51816 1311 aa13.53□□□□□ -0.24
NEK3-203ENST00000551355 DISP2A7MBM2 1401 aa13.53□□□□□ -0.24
NEK3-203ENST00000551355 EXOC5O00471 708 aa13.52□□□□□ -0.25
NEK3-203ENST00000551355 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.25
NEK3-203ENST00000551355 PHKG2P15735 406 aa13.52□□□□□ -0.25
NEK3-203ENST00000551355 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.25
NEK3-203ENST00000551355 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
NEK3-203ENST00000551355 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
NEK3-203ENST00000551355 NRAPQ86VF7 1730 aa13.52□□□□□ -0.25
NEK3-203ENST00000551355 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
NEK3-203ENST00000551355 CEMIPQ8WUJ3 1361 aa13.51□□□□□ -0.25
NEK3-203ENST00000551355 ZNF853P0CG23 659 aa13.51□□□□□ -0.25
NEK3-203ENST00000551355 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
NEK3-203ENST00000551355 ZNF772Q68DY9 489 aaPredicted RBP13.51□□□□□ -0.25
NEK3-203ENST00000551355 MCM10Q7L590 875 aa13.51□□□□□ -0.25
NEK3-203ENST00000551355 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
NEK3-203ENST00000551355 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
NEK3-203ENST00000551355 TEFQ10587 303 aa13.5□□□□□ -0.25
NEK3-203ENST00000551355 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
NEK3-203ENST00000551355 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
NEK3-203ENST00000551355 CHL1O00533 1208 aa13.49□□□□□ -0.25
NEK3-203ENST00000551355 CYP27B1O15528 508 aa13.49□□□□□ -0.25
NEK3-203ENST00000551355 DCTN1Q14203 1278 aa13.49□□□□□ -0.25
NEK3-203ENST00000551355 DDB1Q16531 1140 aa13.49□□□□□ -0.25
NEK3-203ENST00000551355 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
NEK3-203ENST00000551355 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
NEK3-203ENST00000551355 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.49□□□□□ -0.25
NEK3-203ENST00000551355 ATRNO75882 1429 aa13.48□□□□□ -0.25
NEK3-203ENST00000551355 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
NEK3-203ENST00000551355 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
NEK3-203ENST00000551355 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
NEK3-203ENST00000551355 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
NEK3-203ENST00000551355 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
NEK3-203ENST00000551355 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
NEK3-203ENST00000551355 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
NEK3-203ENST00000551355 DDX54Q8TDD1 881 aaKnown RBP13.47□□□□□ -0.25
NEK3-203ENST00000551355 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
NEK3-203ENST00000551355 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
NEK3-203ENST00000551355 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
NEK3-203ENST00000551355 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.25
NEK3-203ENST00000551355 ONECUT3O60422 494 aaPredicted RBP13.46□□□□□ -0.25
NEK3-203ENST00000551355 LGR6Q9HBX8 967 aa13.46□□□□□ -0.25
NEK3-203ENST00000551355 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
NEK3-203ENST00000551355 TSPYL4Q9UJ04 414 aa13.46□□□□□ -0.25
NEK3-203ENST00000551355 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
NEK3-203ENST00000551355 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
NEK3-203ENST00000551355 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
NEK3-203ENST00000551355 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
NEK3-203ENST00000551355 CABP4P57796 275 aa13.44□□□□□ -0.26
NEK3-203ENST00000551355 TSR2Q969E8 191 aaKnown RBP13.44□□□□□ -0.26
NEK3-203ENST00000551355 KDM6AO15550 1401 aaPredicted RBP13.43□□□□□ -0.26
NEK3-203ENST00000551355 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
NEK3-203ENST00000551355 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
NEK3-203ENST00000551355 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms