RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 EXOC5O00471 708 aa10.09□□□□□ -0.79
SMARCD1-210ENST00000551352 SLC15A2Q16348 729 aa10.09□□□□□ -0.79
SMARCD1-210ENST00000551352 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
SMARCD1-210ENST00000551352 PRKRIP1Q9H875 184 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-210ENST00000551352 LRRC4BQ9NT99 713 aa10.09□□□□□ -0.79
SMARCD1-210ENST00000551352 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
SMARCD1-210ENST00000551352 IL2RBP14784 551 aa10.08□□□□□ -0.8
SMARCD1-210ENST00000551352 UTRNP46939 3433 aa10.08□□□□□ -0.8
SMARCD1-210ENST00000551352 MAP3K19Q56UN5 1328 aa10.07□□□□□ -0.8
SMARCD1-210ENST00000551352 HDGFL2Q7Z4V5 671 aaPredicted RBP10.07□□□□□ -0.8
SMARCD1-210ENST00000551352 IP6K1Q92551 441 aa10.07□□□□□ -0.8
SMARCD1-210ENST00000551352 PUS7Q96PZ0 661 aaKnown RBP10.07□□□□□ -0.8
SMARCD1-210ENST00000551352 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
SMARCD1-210ENST00000551352 ANKRD36BQ8N2N9 1353 aa10.06□□□□□ -0.8
SMARCD1-210ENST00000551352 SLC24A1O60721 1099 aa10.06□□□□□ -0.8
SMARCD1-210ENST00000551352 HOXC9P31274 260 aa10.06□□□□□ -0.8
SMARCD1-210ENST00000551352 UBR3Q6ZT12 1888 aa10.06□□□□□ -0.8
SMARCD1-210ENST00000551352 KCNQ4P56696 695 aa10.05□□□□□ -0.8
SMARCD1-210ENST00000551352 CDCA8Q53HL2 280 aa10.05□□□□□ -0.8
SMARCD1-210ENST00000551352 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-210ENST00000551352 STK32BQ9NY57 414 aa10.05□□□□□ -0.8
SMARCD1-210ENST00000551352 TERF2IPQ9NYB0 399 aa10.05□□□□□ -0.8
SMARCD1-210ENST00000551352 YY1P25490 414 aa10.04□□□□□ -0.8
SMARCD1-210ENST00000551352 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
SMARCD1-210ENST00000551352 FHDC1Q9C0D6 1143 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-210ENST00000551352 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-210ENST00000551352 FYB1O15117 783 aa10.03□□□□□ -0.8
SMARCD1-210ENST00000551352 NCAPD2Q15021 1401 aa10.03□□□□□ -0.8
SMARCD1-210ENST00000551352 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-210ENST00000551352 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
SMARCD1-210ENST00000551352 USHBP1Q8N6Y0 703 aa10.03□□□□□ -0.8
SMARCD1-210ENST00000551352 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
SMARCD1-210ENST00000551352 PNPLA7Q6ZV29 1317 aa10.03□□□□□ -0.8
SMARCD1-210ENST00000551352 RTL1A6NKG5 1358 aa10.02□□□□□ -0.8
SMARCD1-210ENST00000551352 GOLGB1Q14789 3259 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-210ENST00000551352 SYT17Q9BSW7 474 aa10.02□□□□□ -0.81
SMARCD1-210ENST00000551352 MTFR1LQ9H019 292 aa10.02□□□□□ -0.81
SMARCD1-210ENST00000551352 GGNBP2Q9H3C7 697 aa10.02□□□□□ -0.81
SMARCD1-210ENST00000551352 VIRMAQ69YN4 1812 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-210ENST00000551352 C4BP0C0L5 1744 aa10.02□□□□□ -0.81
SMARCD1-210ENST00000551352 MAP3K5Q99683 1374 aa10.01□□□□□ -0.81
SMARCD1-210ENST00000551352 PER1O15534 1290 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-210ENST00000551352 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-210ENST00000551352 COG3Q96JB2 828 aa10.01□□□□□ -0.81
SMARCD1-210ENST00000551352 CARD14Q9BXL6 1004 aa10.01□□□□□ -0.81
SMARCD1-210ENST00000551352 PANK3Q9H999 370 aa10.01□□□□□ -0.81
SMARCD1-210ENST00000551352 KIAA1551Q9HCM1 1747 aa10.01□□□□□ -0.81
SMARCD1-210ENST00000551352 PRIM1P49642 420 aaKnown RBP10□□□□□ -0.81
SMARCD1-210ENST00000551352 RALBP1Q15311 655 aa10□□□□□ -0.81
SMARCD1-210ENST00000551352 CCDC184Q52MB2 194 aa10□□□□□ -0.81
SMARCD1-210ENST00000551352 HSP90AB2PQ58FF8 381 aa9.99□□□□□ -0.81
SMARCD1-210ENST00000551352 MRS2Q9HD23 443 aa9.99□□□□□ -0.81
SMARCD1-210ENST00000551352 INSRP06213 1382 aa9.99□□□□□ -0.81
SMARCD1-210ENST00000551352 COL5A3P25940 1745 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-210ENST00000551352 NSD3Q9BZ95 1437 aa9.99□□□□□ -0.81
SMARCD1-210ENST00000551352 AMPHP49418 695 aa9.98□□□□□ -0.81
SMARCD1-210ENST00000551352 AMIGO3Q86WK7 504 aa9.98□□□□□ -0.81
SMARCD1-210ENST00000551352 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-210ENST00000551352 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
SMARCD1-210ENST00000551352 MYBBP1AQ9BQG0 1328 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-210ENST00000551352 CNGB1Q14028 1251 aaPredicted RBP9.97□□□□□ -0.81
SMARCD1-210ENST00000551352 NLGN2Q8NFZ4 835 aa9.97□□□□□ -0.81
SMARCD1-210ENST00000551352 ARXQ96QS3 562 aa9.97□□□□□ -0.81
SMARCD1-210ENST00000551352 FLT4P35916 1363 aa9.97□□□□□ -0.81
SMARCD1-210ENST00000551352 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.81
SMARCD1-210ENST00000551352 MYH14Q7Z406 1995 aaKnown RBP9.96□□□□□ -0.81
SMARCD1-210ENST00000551352 CYP27B1O15528 508 aa9.96□□□□□ -0.82
SMARCD1-210ENST00000551352 SLC27A3Q5K4L6 730 aa9.96□□□□□ -0.82
SMARCD1-210ENST00000551352 ZNF784Q8NCA9 323 aaPredicted RBP9.96□□□□□ -0.82
SMARCD1-210ENST00000551352 NPC1L1Q9UHC9 1359 aa9.96□□□□□ -0.82
SMARCD1-210ENST00000551352 C4AP0C0L4 1744 aa9.96□□□□□ -0.82
SMARCD1-210ENST00000551352 SYTL4Q96C24 671 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-210ENST00000551352 KNSTRNQ9Y448 316 aa9.95□□□□□ -0.82
SMARCD1-210ENST00000551352 ZNF831Q5JPB2 1677 aa9.95□□□□□ -0.82
SMARCD1-210ENST00000551352 BRCA1P38398 1863 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-210ENST00000551352 KIF24Q5T7B8 1368 aa9.94□□□□□ -0.82
SMARCD1-210ENST00000551352 AMER1Q5JTC6 1135 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-210ENST00000551352 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-210ENST00000551352 SMIM5Q71RC9 77 aa9.94□□□□□ -0.82
SMARCD1-210ENST00000551352 COL23A1Q86Y22 540 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-210ENST00000551352 N4BP2Q86UW6 1770 aaPredicted RBP9.93□□□□□ -0.82
SMARCD1-210ENST00000551352 SMG6Q86US8 1419 aaKnown RBP9.93□□□□□ -0.82
SMARCD1-210ENST00000551352 SLC16A10Q8TF71 515 aa9.93□□□□□ -0.82
SMARCD1-210ENST00000551352 CCNL1Q9UK58 526 aaPredicted RBP9.93□□□□□ -0.82
SMARCD1-210ENST00000551352 SCN11AQ9UI33 1791 aa9.93□□□□□ -0.82
SMARCD1-210ENST00000551352 TJP1Q07157 1748 aa9.93□□□□□ -0.82
SMARCD1-210ENST00000551352 PALLDQ8WX93 1383 aa9.92□□□□□ -0.82
SMARCD1-210ENST00000551352 YBX3P16989 372 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMARCD1-210ENST00000551352 HNRNPUQ00839 825 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMARCD1-210ENST00000551352 FAM9BQ8IZU0 186 aa9.92□□□□□ -0.82
SMARCD1-210ENST00000551352 TFCP2L1Q9NZI6 479 aa9.92□□□□□ -0.82
SMARCD1-210ENST00000551352 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
SMARCD1-210ENST00000551352 CGNL1Q0VF96 1302 aa9.91□□□□□ -0.82
SMARCD1-210ENST00000551352 PCDH11XQ9BZA7 1347 aa9.91□□□□□ -0.82
SMARCD1-210ENST00000551352 PCDH11YQ9BZA8 1340 aa9.91□□□□□ -0.82
SMARCD1-210ENST00000551352 TATP17735 454 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-210ENST00000551352 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
SMARCD1-210ENST00000551352 PNISRQ8TF01 805 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-210ENST00000551352 RAPGEF4Q8WZA2 1011 aa9.91□□□□□ -0.82
SMARCD1-210ENST00000551352 CICQ96RK0 1608 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms