RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 KIF13BQ9NQT8 1826 aa20.06■□□□□ 0.8
SNRPF-203ENST00000551316 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
SNRPF-203ENST00000551316 HSPA1AP0DMV8 641 aaKnown RBP20.05■□□□□ 0.8
SNRPF-203ENST00000551316 HSPA1BP0DMV9 641 aaKnown RBP20.05■□□□□ 0.8
SNRPF-203ENST00000551316 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
SNRPF-203ENST00000551316 KDM2AQ9Y2K7 1162 aa20.03■□□□□ 0.8
SNRPF-203ENST00000551316 CABP2Q9NPB3 220 aa20.02■□□□□ 0.8
SNRPF-203ENST00000551316 RGPD2P0DJD1 1756 aa20.02■□□□□ 0.8
SNRPF-203ENST00000551316 FAM208AQ9UK61 1670 aaKnown RBP20.01■□□□□ 0.79
SNRPF-203ENST00000551316 ERBB3P21860 1342 aa20.01■□□□□ 0.79
SNRPF-203ENST00000551316 TNRC6CQ9HCJ0 1690 aaKnown RBP20■□□□□ 0.79
SNRPF-203ENST00000551316 C4BP0C0L5 1744 aa20■□□□□ 0.79
SNRPF-203ENST00000551316 IL2RBP14784 551 aa20■□□□□ 0.79
SNRPF-203ENST00000551316 RBM46Q8TBY0 533 aaKnown RBP20■□□□□ 0.79
SNRPF-203ENST00000551316 KCPQ6ZWJ8 1503 aa19.99■□□□□ 0.79
SNRPF-203ENST00000551316 SMIM5Q71RC9 77 aa19.99■□□□□ 0.79
SNRPF-203ENST00000551316 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
SNRPF-203ENST00000551316 CCNL1Q9UK58 526 aaPredicted RBP19.98■□□□□ 0.79
SNRPF-203ENST00000551316 MON2Q7Z3U7 1717 aa19.98■□□□□ 0.79
SNRPF-203ENST00000551316 KIAA1210Q9ULL0 1709 aa19.98■□□□□ 0.79
SNRPF-203ENST00000551316 ANKRD36BQ8N2N9 1353 aa19.97■□□□□ 0.79
SNRPF-203ENST00000551316 SRPK2P78362 688 aaKnown RBP19.97■□□□□ 0.79
SNRPF-203ENST00000551316 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
SNRPF-203ENST00000551316 DCAF11Q8TEB1 546 aa19.96■□□□□ 0.79
SNRPF-203ENST00000551316 SYTL4Q96C24 671 aaPredicted RBP19.96■□□□□ 0.79
SNRPF-203ENST00000551316 NLRP2Q9NX02 1062 aa19.96■□□□□ 0.79
SNRPF-203ENST00000551316 CABP1Q9NZU7 370 aa19.96■□□□□ 0.79
SNRPF-203ENST00000551316 ARFGEF1Q9Y6D6 1849 aa19.94■□□□□ 0.78
SNRPF-203ENST00000551316 DDX54Q8TDD1 881 aaKnown RBP19.93■□□□□ 0.78
SNRPF-203ENST00000551316 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
SNRPF-203ENST00000551316 PCDH10Q9P2E7 1040 aa19.92■□□□□ 0.78
SNRPF-203ENST00000551316 SBF1O95248 1867 aa19.91■□□□□ 0.78
SNRPF-203ENST00000551316 FSTL1Q12841 308 aa19.9■□□□□ 0.78
SNRPF-203ENST00000551316 KCNH5Q8NCM2 988 aa19.9■□□□□ 0.78
SNRPF-203ENST00000551316 FAM161AQ3B820 660 aa19.89■□□□□ 0.77
SNRPF-203ENST00000551316 C10orf71Q711Q0 1435 aa19.89■□□□□ 0.77
SNRPF-203ENST00000551316 MEGF6O75095 1541 aa19.88■□□□□ 0.77
SNRPF-203ENST00000551316 MAP2P11137 1827 aaKnown RBP19.88■□□□□ 0.77
SNRPF-203ENST00000551316 ITGB4P16144 1822 aa19.88■□□□□ 0.77
SNRPF-203ENST00000551316 ANKRD24Q8TF21 1146 aa19.87■□□□□ 0.77
SNRPF-203ENST00000551316 TNRC18O15417 2968 aaPredicted RBP19.86■□□□□ 0.77
SNRPF-203ENST00000551316 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
SNRPF-203ENST00000551316 C16orf71Q8IYS4 520 aaPredicted RBP19.84■□□□□ 0.77
SNRPF-203ENST00000551316 USP47Q96K76 1375 aa19.83■□□□□ 0.77
SNRPF-203ENST00000551316 PHF14O94880 888 aa19.83■□□□□ 0.77
SNRPF-203ENST00000551316 BCS1LQ9Y276 419 aa19.83■□□□□ 0.77
SNRPF-203ENST00000551316 C9orf131Q5VYM1 1079 aa19.82■□□□□ 0.76
SNRPF-203ENST00000551316 PLEKHG2Q9H7P9 1386 aa19.82■□□□□ 0.76
SNRPF-203ENST00000551316 CENPJQ9HC77 1338 aaPredicted RBP19.81■□□□□ 0.76
SNRPF-203ENST00000551316 ARHGAP27Q6ZUM4 889 aa19.81■□□□□ 0.76
SNRPF-203ENST00000551316 RRAGCQ9HB90 399 aa19.81■□□□□ 0.76
SNRPF-203ENST00000551316 TIAM2Q8IVF5 1701 aa19.81■□□□□ 0.76
SNRPF-203ENST00000551316 C4AP0C0L4 1744 aa19.79■□□□□ 0.76
SNRPF-203ENST00000551316 TTC21AQ8NDW8 1320 aa19.79■□□□□ 0.76
SNRPF-203ENST00000551316 A0A0G2JLW4 131 aa19.79■□□□□ 0.76
SNRPF-203ENST00000551316 PALLDQ8WX93 1383 aa19.79■□□□□ 0.76
SNRPF-203ENST00000551316 FOXN1O15353 648 aa19.78■□□□□ 0.76
SNRPF-203ENST00000551316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.77■□□□□ 0.76
SNRPF-203ENST00000551316 USP31Q70CQ4 1352 aa19.77■□□□□ 0.76
SNRPF-203ENST00000551316 SMC1BQ8NDV3 1235 aa19.76■□□□□ 0.75
SNRPF-203ENST00000551316 CD163L1Q9NR16 1453 aa19.75■□□□□ 0.75
SNRPF-203ENST00000551316 NME9Q86XW9 330 aa19.75■□□□□ 0.75
SNRPF-203ENST00000551316 FLAD1Q8NFF5 587 aa19.75■□□□□ 0.75
SNRPF-203ENST00000551316 VIRMAQ69YN4 1812 aaKnown RBP19.74■□□□□ 0.75
SNRPF-203ENST00000551316 KTN1Q86UP2 1357 aaKnown RBP19.74■□□□□ 0.75
SNRPF-203ENST00000551316 CCDC88AQ3V6T2 1871 aa19.73■□□□□ 0.75
SNRPF-203ENST00000551316 LTV1Q96GA3 475 aaPredicted RBP19.73■□□□□ 0.75
SNRPF-203ENST00000551316 AK7Q96M32 723 aa19.73■□□□□ 0.75
SNRPF-203ENST00000551316 MMP10P09238 476 aa19.72■□□□□ 0.75
SNRPF-203ENST00000551316 DPEP1P16444 411 aa19.72■□□□□ 0.75
SNRPF-203ENST00000551316 KDM2BQ8NHM5 1336 aa19.72■□□□□ 0.75
SNRPF-203ENST00000551316 FCHSD2O94868 740 aa19.71■□□□□ 0.75
SNRPF-203ENST00000551316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.71■□□□□ 0.75
SNRPF-203ENST00000551316 RNF181Q9P0P0 153 aa19.71■□□□□ 0.75
SNRPF-203ENST00000551316 SBNO2Q9Y2G9 1366 aa19.7■□□□□ 0.74
SNRPF-203ENST00000551316 KCNA3P22001 575 aa19.69■□□□□ 0.74
SNRPF-203ENST00000551316 LINC00116Q8NCU8 138 aa19.69■□□□□ 0.74
SNRPF-203ENST00000551316 ZCRB1Q8TBF4 217 aaKnown RBP19.69■□□□□ 0.74
SNRPF-203ENST00000551316 MKRN1Q9UHC7 482 aaKnown RBP19.69■□□□□ 0.74
SNRPF-203ENST00000551316 NSD3Q9BZ95 1437 aa19.68■□□□□ 0.74
SNRPF-203ENST00000551316 ABHD8Q96I13 439 aa19.66■□□□□ 0.74
SNRPF-203ENST00000551316 SSFA2P28290 1259 aa19.65■□□□□ 0.74
SNRPF-203ENST00000551316 TGFB2P61812 414 aa19.65■□□□□ 0.74
SNRPF-203ENST00000551316 STAC3Q96MF2 364 aa19.65■□□□□ 0.74
SNRPF-203ENST00000551316 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
SNRPF-203ENST00000551316 PRDM10Q9NQV6 1147 aa19.65■□□□□ 0.74
SNRPF-203ENST00000551316 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
SNRPF-203ENST00000551316 DCAF5Q96JK2 942 aa19.64■□□□□ 0.73
SNRPF-203ENST00000551316 KDM6AO15550 1401 aaPredicted RBP19.64■□□□□ 0.73
SNRPF-203ENST00000551316 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
SNRPF-203ENST00000551316 RASSF7Q02833 373 aa19.63■□□□□ 0.73
SNRPF-203ENST00000551316 USHBP1Q8N6Y0 703 aa19.63■□□□□ 0.73
SNRPF-203ENST00000551316 EVC2Q86UK5 1308 aa19.62■□□□□ 0.73
SNRPF-203ENST00000551316 MPRIPQ6WCQ1 1025 aa19.62■□□□□ 0.73
SNRPF-203ENST00000551316 IP6K1Q92551 441 aa19.62■□□□□ 0.73
SNRPF-203ENST00000551316 GNPATO15228 680 aa19.61■□□□□ 0.73
SNRPF-203ENST00000551316 ITPK1Q13572 414 aa19.61■□□□□ 0.73
SNRPF-203ENST00000551316 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
SNRPF-203ENST00000551316 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
SNRPF-203ENST00000551316 POTECB2RU33 542 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms