RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 NSD2O96028 1365 aa26.33■■□□□ 1.8
RPAP3-207ENST00000551293 ANKRD36BQ8N2N9 1353 aa26.33■■□□□ 1.8
RPAP3-207ENST00000551293 DOT1LQ8TEK3 1739 aa26.32■■□□□ 1.8
RPAP3-207ENST00000551293 MSL1Q68DK7 614 aa26.32■■□□□ 1.8
RPAP3-207ENST00000551293 CCNL1Q9UK58 526 aaPredicted RBP26.32■■□□□ 1.8
RPAP3-207ENST00000551293 MAP3K19Q56UN5 1328 aa26.32■■□□□ 1.8
RPAP3-207ENST00000551293 YBX3P16989 372 aaKnown RBP eCLIP26.31■■□□□ 1.8
RPAP3-207ENST00000551293 HOXC9P31274 260 aa26.31■■□□□ 1.8
RPAP3-207ENST00000551293 AMPHP49418 695 aa26.31■■□□□ 1.8
RPAP3-207ENST00000551293 ZCRB1Q8TBF4 217 aaKnown RBP26.31■■□□□ 1.8
RPAP3-207ENST00000551293 QSER1Q2KHR3 1735 aa26.29■■□□□ 1.8
RPAP3-207ENST00000551293 COL23A1Q86Y22 540 aaPredicted RBP26.29■■□□□ 1.8
RPAP3-207ENST00000551293 USHBP1Q8N6Y0 703 aa26.29■■□□□ 1.8
RPAP3-207ENST00000551293 COG3Q96JB2 828 aa26.29■■□□□ 1.8
RPAP3-207ENST00000551293 MEGF6O75095 1541 aa26.29■■□□□ 1.8
RPAP3-207ENST00000551293 RGPD2P0DJD1 1756 aa26.25■■□□□ 1.79
RPAP3-207ENST00000551293 COL24A1Q17RW2 1714 aa26.25■■□□□ 1.79
RPAP3-207ENST00000551293 SHANK3Q9BYB0 1731 aa26.25■■□□□ 1.79
RPAP3-207ENST00000551293 FAM208AQ9UK61 1670 aaKnown RBP26.25■■□□□ 1.79
RPAP3-207ENST00000551293 RRS1Q15050 365 aaKnown RBP26.24■■□□□ 1.79
RPAP3-207ENST00000551293 NBPF6Q5VWK0 638 aa26.24■■□□□ 1.79
RPAP3-207ENST00000551293 NBPF4Q96M43 638 aa26.24■■□□□ 1.79
RPAP3-207ENST00000551293 LY75O60449 1722 aa26.24■■□□□ 1.79
RPAP3-207ENST00000551293 USP47Q96K76 1375 aa26.23■■□□□ 1.79
RPAP3-207ENST00000551293 GRIN3BO60391 1043 aa26.21■■□□□ 1.79
RPAP3-207ENST00000551293 CEP350Q5VT06 3117 aa26.21■■□□□ 1.79
RPAP3-207ENST00000551293 WWC3Q9ULE0 1092 aa26.19■■□□□ 1.78
RPAP3-207ENST00000551293 ST20-MTHFSA0A0A6YYL1 179 aa26.18■■□□□ 1.78
RPAP3-207ENST00000551293 GGNBP2Q9H3C7 697 aa26.18■■□□□ 1.78
RPAP3-207ENST00000551293 SMIM5Q71RC9 77 aa26.17■■□□□ 1.78
RPAP3-207ENST00000551293 RAPGEF4Q8WZA2 1011 aa26.17■■□□□ 1.78
RPAP3-207ENST00000551293 TESK2Q96S53 571 aa26.17■■□□□ 1.78
RPAP3-207ENST00000551293 ATP10DQ9P241 1426 aa26.16■■□□□ 1.78
RPAP3-207ENST00000551293 ZNF526Q8TF50 670 aaPredicted RBP26.16■■□□□ 1.78
RPAP3-207ENST00000551293 PUS7Q96PZ0 661 aaKnown RBP26.16■■□□□ 1.78
RPAP3-207ENST00000551293 TONSLQ96HA7 1378 aa26.16■■□□□ 1.78
RPAP3-207ENST00000551293 MPRIPQ6WCQ1 1025 aa26.15■■□□□ 1.78
RPAP3-207ENST00000551293 TATP17735 454 aaPredicted RBP26.13■■□□□ 1.77
RPAP3-207ENST00000551293 PALLDQ8WX93 1383 aa26.12■■□□□ 1.77
RPAP3-207ENST00000551293 HSP90AB2PQ58FF8 381 aa26.12■■□□□ 1.77
RPAP3-207ENST00000551293 AMIGO3Q86WK7 504 aa26.12■■□□□ 1.77
RPAP3-207ENST00000551293 RTL1A6NKG5 1358 aa26.11■■□□□ 1.77
RPAP3-207ENST00000551293 FYB1O15117 783 aa26.11■■□□□ 1.77
RPAP3-207ENST00000551293 IFFO2Q5TF58 517 aa26.11■■□□□ 1.77
RPAP3-207ENST00000551293 C5P01031 1676 aa26.1■■□□□ 1.77
RPAP3-207ENST00000551293 PHF14O94880 888 aa26.1■■□□□ 1.77
RPAP3-207ENST00000551293 SMG6Q86US8 1419 aaKnown RBP26.09■■□□□ 1.77
RPAP3-207ENST00000551293 GPBP1L1Q9HC44 474 aaPredicted RBP26.09■■□□□ 1.77
RPAP3-207ENST00000551293 CD2APQ9Y5K6 639 aa26.09■■□□□ 1.77
RPAP3-207ENST00000551293 CGNL1Q0VF96 1302 aa26.08■■□□□ 1.77
RPAP3-207ENST00000551293 PCDH11XQ9BZA7 1347 aa26.08■■□□□ 1.77
RPAP3-207ENST00000551293 PCDH11YQ9BZA8 1340 aa26.08■■□□□ 1.77
RPAP3-207ENST00000551293 CYP27B1O15528 508 aa26.07■■□□□ 1.76
RPAP3-207ENST00000551293 AK7Q96M32 723 aa26.07■■□□□ 1.76
RPAP3-207ENST00000551293 FLAD1Q8NFF5 587 aa26.05■■□□□ 1.76
RPAP3-207ENST00000551293 IGSF1Q8N6C5 1336 aa26.03■■□□□ 1.76
RPAP3-207ENST00000551293 INSRP06213 1382 aa26.02■■□□□ 1.76
RPAP3-207ENST00000551293 C4BP0C0L5 1744 aa26.02■■□□□ 1.76
RPAP3-207ENST00000551293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.01■■□□□ 1.75
RPAP3-207ENST00000551293 PIGBQ92521 554 aa26.01■■□□□ 1.75
RPAP3-207ENST00000551293 TAF1LQ8IZX4 1826 aa26■■□□□ 1.75
RPAP3-207ENST00000551293 TOGARAM1Q9Y4F4 1720 aa26■■□□□ 1.75
RPAP3-207ENST00000551293 EMILIN1Q9Y6C2 1016 aa26■■□□□ 1.75
RPAP3-207ENST00000551293 ADCY9O60503 1353 aa25.99■■□□□ 1.75
RPAP3-207ENST00000551293 FLT4P35916 1363 aa25.99■■□□□ 1.75
RPAP3-207ENST00000551293 PPM1GO15355 546 aaPredicted RBP25.99■■□□□ 1.75
RPAP3-207ENST00000551293 SMARCC1Q92922 1105 aaPredicted RBP25.99■■□□□ 1.75
RPAP3-207ENST00000551293 LINC00116Q8NCU8 138 aa25.98■■□□□ 1.75
RPAP3-207ENST00000551293 HSPA6P17066 643 aa25.97■■□□□ 1.75
RPAP3-207ENST00000551293 TMF1P82094 1093 aa25.97■■□□□ 1.75
RPAP3-207ENST00000551293 ITGB4P16144 1822 aa25.94■■□□□ 1.74
RPAP3-207ENST00000551293 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
RPAP3-207ENST00000551293 GNPATO15228 680 aa25.93■■□□□ 1.74
RPAP3-207ENST00000551293 SIK1P57059 783 aa25.93■■□□□ 1.74
RPAP3-207ENST00000551293 SLC24A1O60721 1099 aa25.92■■□□□ 1.74
RPAP3-207ENST00000551293 ITPK1Q13572 414 aa25.92■■□□□ 1.74
RPAP3-207ENST00000551293 CARD14Q9BXL6 1004 aa25.92■■□□□ 1.74
RPAP3-207ENST00000551293 ASAP1Q9ULH1 1129 aa25.92■■□□□ 1.74
RPAP3-207ENST00000551293 KIF20BQ96Q89 1820 aa25.92■■□□□ 1.74
RPAP3-207ENST00000551293 UBR3Q6ZT12 1888 aa25.91■■□□□ 1.74
RPAP3-207ENST00000551293 HMGB2P26583 209 aaKnown RBP25.91■■□□□ 1.74
RPAP3-207ENST00000551293 SSFA2P28290 1259 aa25.9■■□□□ 1.74
RPAP3-207ENST00000551293 TMOD3Q9NYL9 352 aa25.9■■□□□ 1.74
RPAP3-207ENST00000551293 SPG7Q9UQ90 795 aa25.9■■□□□ 1.74
RPAP3-207ENST00000551293 ATP6V1AP38606 617 aa25.89■■□□□ 1.74
RPAP3-207ENST00000551293 PKD1L3Q7Z443 1732 aa25.88■■□□□ 1.73
RPAP3-207ENST00000551293 NKX1-1Q15270 411 aaPredicted RBP25.88■■□□□ 1.73
RPAP3-207ENST00000551293 NSD3Q9BZ95 1437 aa25.88■■□□□ 1.73
RPAP3-207ENST00000551293 KIF24Q5T7B8 1368 aa25.87■■□□□ 1.73
RPAP3-207ENST00000551293 KIF3CO14782 793 aa25.87■■□□□ 1.73
RPAP3-207ENST00000551293 MMP10P09238 476 aa25.87■■□□□ 1.73
RPAP3-207ENST00000551293 EYA1Q99502 592 aa25.86■■□□□ 1.73
RPAP3-207ENST00000551293 MAP2P11137 1827 aaKnown RBP25.85■■□□□ 1.73
RPAP3-207ENST00000551293 ATG3Q9NT62 314 aa25.84■■□□□ 1.73
RPAP3-207ENST00000551293 A0A0G2JLW4 131 aa25.83■■□□□ 1.73
RPAP3-207ENST00000551293 BCS1LQ9Y276 419 aa25.83■■□□□ 1.73
RPAP3-207ENST00000551293 PHKG2P15735 406 aa25.82■■□□□ 1.72
RPAP3-207ENST00000551293 NCAPD2Q15021 1401 aa25.81■■□□□ 1.72
RPAP3-207ENST00000551293 PXDNLA1KZ92 1463 aa25.81■■□□□ 1.72
RPAP3-207ENST00000551293 IFNL2Q8IZJ0 200 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms