RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MIA2Q96PC5 1412 aa6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 MTERF4Q7Z6M4 381 aaKnown RBP6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 PPP1R9BQ96SB3 815 aa6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 TMEM51Q9NW97 253 aa6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 RCAN3Q9UKA8 241 aa6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 NAP1L2Q9ULW6 460 aaPredicted RBP6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 NDUFB9Q9Y6M9 179 aa6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 PTPN23Q9H3S7 1636 aa6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 ZSCAN20P17040 1043 aaPredicted RBP6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 RPIAP49247 311 aa6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 TRIM32Q13049 653 aa6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 CENPQQ7L2Z9 268 aaPredicted RBP6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 PANK2Q9BZ23 570 aa6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 FKBPLQ9UIM3 349 aa6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 BRD4O60885 1362 aaPredicted RBP6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 ZMYM3Q14202 1370 aa6.77□□□□□ -1.33
LSM3P2-201ENST00000551246 ZC3H4Q9UPT8 1303 aaKnown RBP6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 APBB1O00213 710 aa6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 SKOR1P84550 965 aa6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 IRF5Q13568 498 aa6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 CLUAP1Q96AJ1 413 aa6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 OCSTAMPQ9BR26 566 aa6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 GDPD2Q9HCC8 539 aa6.76□□□□□ -1.33
LSM3P2-201ENST00000551246 ROCK2O75116 1388 aaKnown RBP6.75□□□□□ -1.33
LSM3P2-201ENST00000551246 MCM4P33991 863 aa6.75□□□□□ -1.33
LSM3P2-201ENST00000551246 HS1BP3Q53T59 392 aa6.75□□□□□ -1.33
LSM3P2-201ENST00000551246 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
LSM3P2-201ENST00000551246 ARHGAP31Q2M1Z3 1444 aa6.75□□□□□ -1.33
LSM3P2-201ENST00000551246 TEX14Q8IWB6 1497 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 KIF20AO95235 890 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 SLC19A1P41440 591 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 SH3BP2P78314 561 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 SPRYD7Q5W111 196 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 SH3BP5LQ7L8J4 393 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 SH3RF1Q7Z6J0 888 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 FNBP4Q8N3X1 1017 aaPredicted RBP6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 ZNF511Q8NB15 262 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 BAP1Q92560 729 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 GPKOWQ92917 476 aaPredicted RBP eCLIP6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 PRKD2Q9BZL6 878 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 V9GY48 417 aaPredicted RBP6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 FMN1Q68DA7 1419 aa6.74□□□□□ -1.33
LSM3P2-201ENST00000551246 HECW1Q76N89 1606 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 A6NJR5 290 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 ZNF500O60304 480 aaPredicted RBP6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 DDIT3P35638 169 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 WNT7BP56706 349 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 C4orf48Q5BLP8 95 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 NBPF14Q5TI25 921 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 ARMC2Q8NEN0 867 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 CRBNQ96SW2 442 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 GRPEL1Q9HAV7 217 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 FGD6Q6ZV73 1430 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 MBD5Q9P267 1494 aa6.73□□□□□ -1.33
LSM3P2-201ENST00000551246 DYNC1I1O14576 645 aa6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 PDXDC2PQ6P474 469 aa6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 ZSCAN30Q86W11 494 aa6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 FOXJ1Q92949 421 aa6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 BLMP54132 1417 aaPredicted RBP6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 NCOA3Q9Y6Q9 1424 aa6.72□□□□□ -1.33
LSM3P2-201ENST00000551246 CUX1P39880 1505 aa6.71□□□□□ -1.33
LSM3P2-201ENST00000551246 RGS20O76081 388 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 FBXO45P0C2W1 286 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 CANXP27824 592 aaKnown RBP6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 ABL2P42684 1182 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 BECN1Q14457 450 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 NBPF8Q3BBV2 869 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 ZNF598Q86UK7 904 aaKnown RBP6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 PROSER2Q86WR7 435 aaPredicted RBP6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 SKAP1Q86WV1 359 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 CCDC94Q9BW85 323 aaPredicted RBP6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 C1QTNF2Q9BXJ5 285 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 RPRD2Q5VT52 1461 aaKnown RBP6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 PLEKHH2Q8IVE3 1493 aa6.71□□□□□ -1.34
LSM3P2-201ENST00000551246 ANKRD30BQ9BXX2 1392 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 IBTKQ9P2D0 1353 aaPredicted RBP6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 TRAK2O60296 914 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 SLC20A2Q08357 652 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 ZNF697Q5TEC3 545 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 C14orf37Q86TY3 774 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 PNMA1Q8ND90 353 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 L3MBTL2Q969R5 705 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 ZNF830Q96NB3 372 aaPredicted RBP6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 PRM3Q9NNZ6 103 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 PKD2L1Q9P0L9 805 aa6.7□□□□□ -1.34
LSM3P2-201ENST00000551246 VIRMAQ69YN4 1812 aaKnown RBP6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 RTEL1-TNFRSF6BF6WH68 1400 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 KIF27Q86VH2 1401 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 CASKIN1Q8WXD9 1431 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 ZBBXA8MT70 800 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 RAD21O60216 631 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 LETM1O95202 739 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms