RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 MEGF6O75095 1541 aa18.11■□□□□ 0.49
CEP290-205ENST00000550962 RGPD2P0DJD1 1756 aa18.1■□□□□ 0.49
CEP290-205ENST00000550962 NHSQ6T4R5 1651 aa18.09■□□□□ 0.49
CEP290-205ENST00000550962 NPC1L1Q9UHC9 1359 aa18.09■□□□□ 0.49
CEP290-205ENST00000550962 PLEKHG2Q9H7P9 1386 aa18.08■□□□□ 0.49
CEP290-205ENST00000550962 ACSBG1Q96GR2 724 aa18.08■□□□□ 0.48
CEP290-205ENST00000550962 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
CEP290-205ENST00000550962 RREB1Q92766 1687 aa18.08■□□□□ 0.48
CEP290-205ENST00000550962 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
CEP290-205ENST00000550962 MSH5O43196 834 aa18.07■□□□□ 0.48
CEP290-205ENST00000550962 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
CEP290-205ENST00000550962 PER1O15534 1290 aaPredicted RBP18.06■□□□□ 0.48
CEP290-205ENST00000550962 EYA1Q99502 592 aa18.06■□□□□ 0.48
CEP290-205ENST00000550962 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
CEP290-205ENST00000550962 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
CEP290-205ENST00000550962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.483e-11■■■■■ 27.4
CEP290-205ENST00000550962 KCNQ2O43526 872 aa18.04■□□□□ 0.48
CEP290-205ENST00000550962 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
CEP290-205ENST00000550962 NUP188Q5SRE5 1749 aa18.03■□□□□ 0.48
CEP290-205ENST00000550962 IGSF1Q8N6C5 1336 aa18.03■□□□□ 0.48
CEP290-205ENST00000550962 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
CEP290-205ENST00000550962 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
CEP290-205ENST00000550962 TXNRD1Q16881 649 aa18.02■□□□□ 0.48
CEP290-205ENST00000550962 PTF1AQ7RTS3 328 aa18.01■□□□□ 0.47
CEP290-205ENST00000550962 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
CEP290-205ENST00000550962 SHANK3Q9BYB0 1731 aa18.01■□□□□ 0.47
CEP290-205ENST00000550962 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
CEP290-205ENST00000550962 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
CEP290-205ENST00000550962 MTHFSP49914 203 aa18■□□□□ 0.47
CEP290-205ENST00000550962 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
CEP290-205ENST00000550962 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
CEP290-205ENST00000550962 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
CEP290-205ENST00000550962 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
CEP290-205ENST00000550962 BTAF1O14981 1849 aa17.99■□□□□ 0.47
CEP290-205ENST00000550962 HSP90AB1P08238 724 aaKnown RBP17.98■□□□□ 0.47
CEP290-205ENST00000550962 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
CEP290-205ENST00000550962 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
CEP290-205ENST00000550962 KAT6BQ8WYB5 2073 aa17.98■□□□□ 0.47
CEP290-205ENST00000550962 CYP27B1O15528 508 aa17.97■□□□□ 0.47
CEP290-205ENST00000550962 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
CEP290-205ENST00000550962 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
CEP290-205ENST00000550962 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
CEP290-205ENST00000550962 IL13P35225 146 aa17.96■□□□□ 0.47
CEP290-205ENST00000550962 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
CEP290-205ENST00000550962 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
CEP290-205ENST00000550962 LRP5O75197 1615 aa17.94■□□□□ 0.46
CEP290-205ENST00000550962 PHKG2P15735 406 aa17.94■□□□□ 0.46
CEP290-205ENST00000550962 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
CEP290-205ENST00000550962 PROM2Q8N271 834 aa17.94■□□□□ 0.46
CEP290-205ENST00000550962 SMARCC1Q92922 1105 aaPredicted RBP17.94■□□□□ 0.46
CEP290-205ENST00000550962 KDRP35968 1356 aa17.93■□□□□ 0.46
CEP290-205ENST00000550962 SLC15A2Q16348 729 aa17.93■□□□□ 0.46
CEP290-205ENST00000550962 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
CEP290-205ENST00000550962 ZNF530Q6P9A1 599 aaPredicted RBP17.92■□□□□ 0.46
CEP290-205ENST00000550962 TMOD3Q9NYL9 352 aa17.92■□□□□ 0.46
CEP290-205ENST00000550962 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
CEP290-205ENST00000550962 ANO8Q9HCE9 1232 aaPredicted RBP17.91■□□□□ 0.46
CEP290-205ENST00000550962 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
CEP290-205ENST00000550962 AEBP1Q8IUX7 1158 aa17.9■□□□□ 0.46
CEP290-205ENST00000550962 SPON1Q9HCB6 807 aa17.9■□□□□ 0.46
CEP290-205ENST00000550962 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
CEP290-205ENST00000550962 PALLDQ8WX93 1383 aa17.89■□□□□ 0.45
CEP290-205ENST00000550962 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
CEP290-205ENST00000550962 U2SURPO15042 1029 aaKnown RBP17.88■□□□□ 0.45
CEP290-205ENST00000550962 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
CEP290-205ENST00000550962 LY75O60449 1722 aa17.86■□□□□ 0.45
CEP290-205ENST00000550962 TOGARAM1Q9Y4F4 1720 aa17.86■□□□□ 0.45
CEP290-205ENST00000550962 HMOX1P09601 288 aa17.86■□□□□ 0.45
CEP290-205ENST00000550962 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
CEP290-205ENST00000550962 PIGBQ92521 554 aa17.86■□□□□ 0.45
CEP290-205ENST00000550962 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
CEP290-205ENST00000550962 PPP1R1BQ9UD71 204 aaPredicted RBP17.86■□□□□ 0.45
CEP290-205ENST00000550962 COL3A1P02461 1466 aaPredicted RBP17.85■□□□□ 0.45
CEP290-205ENST00000550962 CABP4P57796 275 aa17.85■□□□□ 0.45
CEP290-205ENST00000550962 AKAP4Q5JQC9 854 aa17.85■□□□□ 0.45
CEP290-205ENST00000550962 TFCP2L1Q9NZI6 479 aa17.85■□□□□ 0.45
CEP290-205ENST00000550962 ITGB4P16144 1822 aa17.84■□□□□ 0.45
CEP290-205ENST00000550962 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
CEP290-205ENST00000550962 SLC16A10Q8TF71 515 aa17.82■□□□□ 0.44
CEP290-205ENST00000550962 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
CEP290-205ENST00000550962 CASZ1Q86V15 1759 aa17.81■□□□□ 0.44
CEP290-205ENST00000550962 RALBP1Q15311 655 aa17.81■□□□□ 0.44
CEP290-205ENST00000550962 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
CEP290-205ENST00000550962 FLAD1Q8NFF5 587 aa17.81■□□□□ 0.44
CEP290-205ENST00000550962 GAS2L2Q8NHY3 880 aa17.81■□□□□ 0.44
CEP290-205ENST00000550962 LOC102724428A0A0B4J2F2 783 aa17.8■□□□□ 0.44
CEP290-205ENST00000550962 NEFMP07197 916 aa17.8■□□□□ 0.44
CEP290-205ENST00000550962 SIK1P57059 783 aa17.8■□□□□ 0.44
CEP290-205ENST00000550962 DDX10Q13206 875 aaKnown RBP17.8■□□□□ 0.44
CEP290-205ENST00000550962 PIAS4Q8N2W9 510 aaPredicted RBP17.8■□□□□ 0.44
CEP290-205ENST00000550962 AK7Q96M32 723 aa17.8■□□□□ 0.44
CEP290-205ENST00000550962 KDM6AO15550 1401 aaPredicted RBP17.8■□□□□ 0.44
CEP290-205ENST00000550962 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
CEP290-205ENST00000550962 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
CEP290-205ENST00000550962 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
CEP290-205ENST00000550962 KCNQ4P56696 695 aa17.79■□□□□ 0.44
CEP290-205ENST00000550962 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.44
CEP290-205ENST00000550962 C5P01031 1676 aa17.79■□□□□ 0.44
CEP290-205ENST00000550962 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
CEP290-205ENST00000550962 ATP6V1AP38606 617 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms