RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
CPNE8-207ENST00000550863 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
CPNE8-207ENST00000550863 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
CPNE8-207ENST00000550863 KCNQ4P56696 695 aa16■□□□□ 0.15
CPNE8-207ENST00000550863 ZNF827Q17R98 1081 aa16■□□□□ 0.15
CPNE8-207ENST00000550863 HSP90AB2PQ58FF8 381 aa16■□□□□ 0.15
CPNE8-207ENST00000550863 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
CPNE8-207ENST00000550863 SMG6Q86US8 1419 aaKnown RBP15.99■□□□□ 0.15
CPNE8-207ENST00000550863 FLT4P35916 1363 aa15.99■□□□□ 0.15
CPNE8-207ENST00000550863 COL24A1Q17RW2 1714 aa15.98■□□□□ 0.15
CPNE8-207ENST00000550863 SPON1Q9HCB6 807 aa15.98■□□□□ 0.15
CPNE8-207ENST00000550863 INSRP06213 1382 aa15.98■□□□□ 0.15
CPNE8-207ENST00000550863 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
CPNE8-207ENST00000550863 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
CPNE8-207ENST00000550863 SLC15A2Q16348 729 aa15.97■□□□□ 0.15
CPNE8-207ENST00000550863 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
CPNE8-207ENST00000550863 STK32BQ9NY57 414 aa15.97■□□□□ 0.15
CPNE8-207ENST00000550863 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
CPNE8-207ENST00000550863 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
CPNE8-207ENST00000550863 SLC24A1O60721 1099 aa15.95■□□□□ 0.14
CPNE8-207ENST00000550863 PTGER2P43116 358 aa15.95■□□□□ 0.14
CPNE8-207ENST00000550863 CDCA8Q53HL2 280 aa15.95■□□□□ 0.14
CPNE8-207ENST00000550863 CCER1Q8TC90 406 aaPredicted RBP15.95■□□□□ 0.14
CPNE8-207ENST00000550863 NCAPD2Q15021 1401 aa15.94■□□□□ 0.14
CPNE8-207ENST00000550863 UTRNP46939 3433 aa15.94■□□□□ 0.14
CPNE8-207ENST00000550863 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
CPNE8-207ENST00000550863 PRIM1P49642 420 aaKnown RBP15.94■□□□□ 0.14
CPNE8-207ENST00000550863 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
CPNE8-207ENST00000550863 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
CPNE8-207ENST00000550863 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
CPNE8-207ENST00000550863 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
CPNE8-207ENST00000550863 UBR3Q6ZT12 1888 aa15.91■□□□□ 0.14
CPNE8-207ENST00000550863 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
CPNE8-207ENST00000550863 RAPGEF4Q8WZA2 1011 aa15.9■□□□□ 0.14
CPNE8-207ENST00000550863 C4BP0C0L5 1744 aa15.9■□□□□ 0.14
CPNE8-207ENST00000550863 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
CPNE8-207ENST00000550863 CYP27B1O15528 508 aa15.89■□□□□ 0.13
CPNE8-207ENST00000550863 TATP17735 454 aaPredicted RBP15.89■□□□□ 0.13
CPNE8-207ENST00000550863 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
CPNE8-207ENST00000550863 SGIP1Q9BQI5 828 aa15.89■□□□□ 0.13
CPNE8-207ENST00000550863 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
CPNE8-207ENST00000550863 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
CPNE8-207ENST00000550863 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
CPNE8-207ENST00000550863 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
CPNE8-207ENST00000550863 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
CPNE8-207ENST00000550863 POLKQ9UBT6 870 aa15.87■□□□□ 0.13
CPNE8-207ENST00000550863 CHD4Q14839 1912 aa15.86■□□□□ 0.13
CPNE8-207ENST00000550863 EYA1Q99502 592 aa15.86■□□□□ 0.13
CPNE8-207ENST00000550863 FHDC1Q9C0D6 1143 aaPredicted RBP15.86■□□□□ 0.13
CPNE8-207ENST00000550863 PANK3Q9H999 370 aa15.86■□□□□ 0.13
CPNE8-207ENST00000550863 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
CPNE8-207ENST00000550863 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
CPNE8-207ENST00000550863 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
CPNE8-207ENST00000550863 WASHC2AQ641Q2 1341 aa15.85■□□□□ 0.13
CPNE8-207ENST00000550863 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
CPNE8-207ENST00000550863 SLC27A3Q5K4L6 730 aa15.84■□□□□ 0.13
CPNE8-207ENST00000550863 MPRIPQ6WCQ1 1025 aa15.84■□□□□ 0.13
CPNE8-207ENST00000550863 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
CPNE8-207ENST00000550863 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
CPNE8-207ENST00000550863 AMIGO3Q86WK7 504 aa15.82■□□□□ 0.12
CPNE8-207ENST00000550863 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
CPNE8-207ENST00000550863 SYT17Q9BSW7 474 aa15.81■□□□□ 0.12
CPNE8-207ENST00000550863 TFCP2L1Q9NZI6 479 aa15.81■□□□□ 0.12
CPNE8-207ENST00000550863 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
CPNE8-207ENST00000550863 KIF7Q2M1P5 1343 aa15.8■□□□□ 0.12
CPNE8-207ENST00000550863 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
CPNE8-207ENST00000550863 ARXQ96QS3 562 aa15.8■□□□□ 0.12
CPNE8-207ENST00000550863 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
CPNE8-207ENST00000550863 IGSF1Q8N6C5 1336 aa15.79■□□□□ 0.12
CPNE8-207ENST00000550863 YY1P25490 414 aa15.79■□□□□ 0.12
CPNE8-207ENST00000550863 PIGBQ92521 554 aa15.79■□□□□ 0.12
CPNE8-207ENST00000550863 KDM6AO15550 1401 aaPredicted RBP15.78■□□□□ 0.12
CPNE8-207ENST00000550863 TJP1Q07157 1748 aa15.78■□□□□ 0.12
CPNE8-207ENST00000550863 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
CPNE8-207ENST00000550863 AEBP1Q8IUX7 1158 aa15.78■□□□□ 0.12
CPNE8-207ENST00000550863 MSH5O43196 834 aa15.77■□□□□ 0.12
CPNE8-207ENST00000550863 MYH14Q7Z406 1995 aaKnown RBP15.76■□□□□ 0.11
CPNE8-207ENST00000550863 PHKG2P15735 406 aa15.76■□□□□ 0.11
CPNE8-207ENST00000550863 NLGN2Q8NFZ4 835 aa15.76■□□□□ 0.11
CPNE8-207ENST00000550863 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
CPNE8-207ENST00000550863 SPG7Q9UQ90 795 aa15.75■□□□□ 0.11
CPNE8-207ENST00000550863 MAP3K5Q99683 1374 aa15.75■□□□□ 0.11
CPNE8-207ENST00000550863 ZNF831Q5JPB2 1677 aa15.74■□□□□ 0.11
CPNE8-207ENST00000550863 PHF14O94880 888 aa15.74■□□□□ 0.11
CPNE8-207ENST00000550863 NKX1-1Q15270 411 aaPredicted RBP15.74■□□□□ 0.11
CPNE8-207ENST00000550863 LINC00116Q8NCU8 138 aa15.74■□□□□ 0.11
CPNE8-207ENST00000550863 ASAP1Q9ULH1 1129 aa15.74■□□□□ 0.11
CPNE8-207ENST00000550863 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
CPNE8-207ENST00000550863 KDRP35968 1356 aa15.74■□□□□ 0.11
CPNE8-207ENST00000550863 ITPK1Q13572 414 aa15.73■□□□□ 0.11
CPNE8-207ENST00000550863 AMER1Q5JTC6 1135 aaPredicted RBP15.73■□□□□ 0.11
CPNE8-207ENST00000550863 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
CPNE8-207ENST00000550863 TMOD3Q9NYL9 352 aa15.72■□□□□ 0.11
CPNE8-207ENST00000550863 POLD1P28340 1107 aa15.71■□□□□ 0.11
CPNE8-207ENST00000550863 IFNL2Q8IZJ0 200 aa15.71■□□□□ 0.11
CPNE8-207ENST00000550863 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
CPNE8-207ENST00000550863 SLC16A10Q8TF71 515 aa15.71■□□□□ 0.11
CPNE8-207ENST00000550863 KNSTRNQ9Y448 316 aa15.71■□□□□ 0.11
CPNE8-207ENST00000550863 N4BP2Q86UW6 1770 aaPredicted RBP15.71■□□□□ 0.11
CPNE8-207ENST00000550863 CICQ96RK0 1608 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms