RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 CENPQQ7L2Z9 268 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-213ENST00000550831 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
TMEM116-213ENST00000550831 ABTB2Q8N961 1025 aa11.83□□□□□ -0.52
TMEM116-213ENST00000550831 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
TMEM116-213ENST00000550831 RBM19Q9Y4C8 960 aaKnown RBP11.83□□□□□ -0.52
TMEM116-213ENST00000550831 ALS2Q96Q42 1657 aa11.82□□□□□ -0.52
TMEM116-213ENST00000550831 TCERG1O14776 1098 aaKnown RBP11.82□□□□□ -0.52
TMEM116-213ENST00000550831 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
TMEM116-213ENST00000550831 HOXC9P31274 260 aa11.82□□□□□ -0.52
TMEM116-213ENST00000550831 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-213ENST00000550831 SULT6B1Q6IMI4 303 aa11.82□□□□□ -0.52
TMEM116-213ENST00000550831 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
TMEM116-213ENST00000550831 NCAPD2Q15021 1401 aa11.82□□□□□ -0.52
TMEM116-213ENST00000550831 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
TMEM116-213ENST00000550831 USP19O94966 1318 aa11.81□□□□□ -0.52
TMEM116-213ENST00000550831 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
TMEM116-213ENST00000550831 AMPHP49418 695 aa11.81□□□□□ -0.52
TMEM116-213ENST00000550831 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-213ENST00000550831 ESCO1Q5FWF5 840 aa11.81□□□□□ -0.52
TMEM116-213ENST00000550831 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
TMEM116-213ENST00000550831 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
TMEM116-213ENST00000550831 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
TMEM116-213ENST00000550831 MEX3CQ5U5Q3 659 aaKnown RBP11.8□□□□□ -0.52
TMEM116-213ENST00000550831 AEBP1Q8IUX7 1158 aa11.8□□□□□ -0.52
TMEM116-213ENST00000550831 IP6K1Q92551 441 aa11.8□□□□□ -0.52
TMEM116-213ENST00000550831 ARHGAP45Q92619 1136 aa11.8□□□□□ -0.52
TMEM116-213ENST00000550831 EYA1Q99502 592 aa11.8□□□□□ -0.52
TMEM116-213ENST00000550831 KIAA0232Q92628 1395 aa11.8□□□□□ -0.52
TMEM116-213ENST00000550831 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 PSME1Q06323 249 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 SSH1Q8WYL5 1049 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 CRB1P82279 1406 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 ABCC6O95255 1503 aa11.79□□□□□ -0.52
TMEM116-213ENST00000550831 CHL1O00533 1208 aa11.78□□□□□ -0.52
TMEM116-213ENST00000550831 VAMP4O75379 141 aa11.78□□□□□ -0.52
TMEM116-213ENST00000550831 CANXP27824 592 aaKnown RBP11.78□□□□□ -0.52
TMEM116-213ENST00000550831 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
TMEM116-213ENST00000550831 IPO8O15397 1037 aaKnown RBP11.77□□□□□ -0.52
TMEM116-213ENST00000550831 MVPQ14764 893 aaKnown RBP11.77□□□□□ -0.52
TMEM116-213ENST00000550831 ATF7IPQ6VMQ6 1270 aa11.77□□□□□ -0.52
TMEM116-213ENST00000550831 C14orf37Q86TY3 774 aa11.77□□□□□ -0.52
TMEM116-213ENST00000550831 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.52
TMEM116-213ENST00000550831 ORAI2Q96SN7 254 aa11.77□□□□□ -0.52
TMEM116-213ENST00000550831 MBIPQ9NS73 344 aa11.77□□□□□ -0.52
TMEM116-213ENST00000550831 SMC4Q9NTJ3 1288 aa11.77□□□□□ -0.52
TMEM116-213ENST00000550831 PLEKHG2Q9H7P9 1386 aa11.77□□□□□ -0.52
TMEM116-213ENST00000550831 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-213ENST00000550831 RLBP1P12271 317 aa11.77□□□□□ -0.53
TMEM116-213ENST00000550831 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
TMEM116-213ENST00000550831 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
TMEM116-213ENST00000550831 BABAM1Q9NWV8 329 aa11.77□□□□□ -0.53
TMEM116-213ENST00000550831 NHSL1Q5SYE7 1610 aa11.76□□□□□ -0.53
TMEM116-213ENST00000550831 TRIM27P14373 513 aa11.76□□□□□ -0.53
TMEM116-213ENST00000550831 ATF3P18847 181 aa11.76□□□□□ -0.53
TMEM116-213ENST00000550831 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
TMEM116-213ENST00000550831 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-213ENST00000550831 COG6Q9Y2V7 657 aa11.76□□□□□ -0.53
TMEM116-213ENST00000550831 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
TMEM116-213ENST00000550831 LMO7Q8WWI1 1683 aa11.75□□□□□ -0.53
TMEM116-213ENST00000550831 RXRBP28702 533 aa11.75□□□□□ -0.53
TMEM116-213ENST00000550831 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
TMEM116-213ENST00000550831 KRT28Q7Z3Y7 464 aa11.75□□□□□ -0.53
TMEM116-213ENST00000550831 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
TMEM116-213ENST00000550831 DDX19BQ9UMR2 479 aa11.75□□□□□ -0.53
TMEM116-213ENST00000550831 CRYBG1Q9Y4K1 1723 aa11.75□□□□□ -0.53
TMEM116-213ENST00000550831 GCP02774 474 aa11.74□□□□□ -0.53
TMEM116-213ENST00000550831 BRINP3Q76B58 766 aa11.74□□□□□ -0.53
TMEM116-213ENST00000550831 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
TMEM116-213ENST00000550831 FAM83GA6ND36 823 aa11.73□□□□□ -0.53
TMEM116-213ENST00000550831 FOXO3O43524 673 aa11.73□□□□□ -0.53
TMEM116-213ENST00000550831 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
TMEM116-213ENST00000550831 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
TMEM116-213ENST00000550831 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
TMEM116-213ENST00000550831 BCL2L13Q9BXK5 485 aa11.73□□□□□ -0.53
TMEM116-213ENST00000550831 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
TMEM116-213ENST00000550831 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
TMEM116-213ENST00000550831 PXDNQ92626 1479 aa11.73□□□□□ -0.53
TMEM116-213ENST00000550831 SOX12O15370 315 aa11.72□□□□□ -0.53
TMEM116-213ENST00000550831 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
TMEM116-213ENST00000550831 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
TMEM116-213ENST00000550831 OVOS2A0A0G2JMS6 1433 aa11.72□□□□□ -0.53
TMEM116-213ENST00000550831 NPHP3Q7Z494 1330 aa11.72□□□□□ -0.53
TMEM116-213ENST00000550831 COL18A1P39060 1754 aa11.72□□□□□ -0.53
TMEM116-213ENST00000550831 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
TMEM116-213ENST00000550831 MAP3K5Q99683 1374 aa11.71□□□□□ -0.53
TMEM116-213ENST00000550831 FAM208AQ9UK61 1670 aaKnown RBP11.71□□□□□ -0.53
TMEM116-213ENST00000550831 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
TMEM116-213ENST00000550831 TNNQ9UQP3 1299 aa11.71□□□□□ -0.53
TMEM116-213ENST00000550831 ABCC4O15439 1325 aa11.71□□□□□ -0.53
TMEM116-213ENST00000550831 AFF2P51816 1311 aa11.71□□□□□ -0.53
TMEM116-213ENST00000550831 CACNA1FO60840 1977 aa11.71□□□□□ -0.54
TMEM116-213ENST00000550831 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.54
TMEM116-213ENST00000550831 RGS12O14924 1447 aa11.7□□□□□ -0.54
TMEM116-213ENST00000550831 TNS3Q68CZ2 1445 aa11.7□□□□□ -0.54
TMEM116-213ENST00000550831 RGPD2P0DJD1 1756 aa11.7□□□□□ -0.54
TMEM116-213ENST00000550831 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-213ENST00000550831 GNAT3A8MTJ3 354 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms